2010-06-11 19:02:42 -04:00
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;;; ob-tangle.el --- Extract source code from org-mode files
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2009-06-14 21:30:29 -04:00
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2009-10-29 19:03:43 -04:00
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;; Copyright (C) 2009 Eric Schulte
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2009-06-14 21:30:29 -04:00
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2009-10-29 19:03:43 -04:00
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;; Author: Eric Schulte
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2009-06-14 21:30:29 -04:00
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;; Keywords: literate programming, reproducible research
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;; Homepage: http://orgmode.org
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;; Version: 0.01
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;;; License:
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;; This program is free software; you can redistribute it and/or modify
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;; it under the terms of the GNU General Public License as published by
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;; the Free Software Foundation; either version 3, or (at your option)
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;; any later version.
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;;
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;; This program is distributed in the hope that it will be useful,
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;; but WITHOUT ANY WARRANTY; without even the implied warranty of
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;; MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
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;; GNU General Public License for more details.
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;;
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;; You should have received a copy of the GNU General Public License
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;; along with GNU Emacs; see the file COPYING. If not, write to the
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;; Free Software Foundation, Inc., 51 Franklin Street, Fifth Floor,
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;; Boston, MA 02110-1301, USA.
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;;; Commentary:
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;; Extract the code from source blocks out into raw source-code files.
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;;; Code:
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(require 'ob)
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(eval-when-compile
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(require 'cl))
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2009-06-14 21:30:29 -04:00
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2010-06-17 12:01:24 -04:00
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(defcustom org-babel-tangle-w-comments nil
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"Control the insertion of comments into tangled code. Non-nil
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value will result in the insertion of comments for those
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languages with comment support."
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:group 'org-babel-tangle
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:type 'boolean)
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(defcustom org-babel-tangle-lang-exts
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'(("emacs-lisp" . "el"))
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"Alist mapping languages to their file extensions.
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The key is the language name, the value is the string that should
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be inserted as the extension commonly used to identify files
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written in this language. If no entry is found in this list,
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then the name of the language is used."
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:group 'org-babel-tangle
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:type '(repeat
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(cons
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(string "Language name")
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(string "File Extension"))))
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(defun org-babel-load-file (file)
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"Load the contents of the Emacs Lisp source code blocks in the
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org-mode formatted FILE. This function will first export the
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source code using `org-babel-tangle' and then load the resulting
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file using `load-file'."
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(flet ((age (file)
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(float-time
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(time-subtract (current-time)
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(nth 5 (or (file-attributes (file-truename file))
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(file-attributes file)))))))
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(let* ((base-name (file-name-sans-extension file))
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(exported-file (concat base-name ".el")))
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;; tangle if the org-mode file is newer than the elisp file
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(unless (and (file-exists-p exported-file)
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(> (age file) (age exported-file)))
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(org-babel-tangle-file file exported-file "emacs-lisp"))
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(load-file exported-file)
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(message "loaded %s" exported-file))))
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(defun org-babel-tangle-file (file &optional target-file lang)
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"Extract the bodies of all source code blocks in FILE with
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`org-babel-tangle'. Optional argument TARGET-FILE can be used to
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specify a default export file for all source blocks. Optional
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argument LANG can be used to limit the exported source code
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blocks by language."
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(interactive "fFile to tangle: \nP")
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(let ((visited-p (get-file-buffer (expand-file-name file)))
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to-be-removed)
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(save-window-excursion
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(find-file file)
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(setq to-be-removed (current-buffer))
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(org-babel-tangle target-file lang))
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(unless visited-p
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(kill-buffer to-be-removed))))
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(defun org-babel-tangle-publish (_ filename pub-dir)
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"Tangle FILENAME and place the results in PUB-DIR."
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(mapc (lambda (el) (copy-file el pub-dir t)) (org-babel-tangle-file filename)))
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(defun org-babel-tangle (&optional target-file lang)
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"Extract the bodies of all source code blocks from the current
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file into their own source-specific files. Optional argument
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TARGET-FILE can be used to specify a default export file for all
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source blocks. Optional argument LANG can be used to limit the
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exported source code blocks by language."
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(interactive)
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(save-buffer)
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(save-excursion
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(let ((block-counter 0)
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path-collector)
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(mapc ;; map over all languages
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(lambda (by-lang)
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(let* ((lang (car by-lang))
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(specs (cdr by-lang))
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(ext (or (cdr (assoc lang org-babel-tangle-lang-exts)) lang))
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(lang-f (intern
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(concat
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(or (and (cdr (assoc lang org-src-lang-modes))
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(symbol-name
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(cdr (assoc lang org-src-lang-modes))))
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lang)
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"-mode")))
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she-banged)
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(mapc
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(lambda (spec)
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(flet ((get-spec (name)
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(cdr (assoc name (nth 2 spec)))))
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(let* ((tangle (get-spec :tangle))
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(she-bang ((lambda (sheb) (when (> (length sheb) 0) sheb))
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(get-spec :shebang)))
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(base-name (or (cond
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((string= "yes" tangle)
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(file-name-sans-extension
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(buffer-file-name)))
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((string= "no" tangle) nil)
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((> (length tangle) 0) tangle))
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target-file))
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(file-name (when base-name
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;; decide if we want to add ext to base-name
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(if (and ext (string= "yes" tangle))
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(concat base-name "." ext) base-name))))
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(when file-name
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;; delete any old versions of file
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(when (and (file-exists-p file-name)
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(not (member file-name path-collector)))
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(delete-file file-name))
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;; drop source-block to file
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(with-temp-buffer
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(if (fboundp lang-f) (funcall lang-f))
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(when (and she-bang (not (member file-name she-banged)))
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(insert (concat she-bang "\n"))
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(setq she-banged (cons file-name she-banged)))
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(org-babel-spec-to-string spec)
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;; We avoid append-to-file as it does not work with tramp.
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(let ((content (buffer-string)))
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(with-temp-buffer
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(if (file-exists-p file-name)
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(insert-file-contents file-name))
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(goto-char (point-max))
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(insert content)
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(write-region nil nil file-name))))
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;; if files contain she-bangs, then make the executable
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(when she-bang (set-file-modes file-name ?\755))
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;; update counter
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(setq block-counter (+ 1 block-counter))
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(add-to-list 'path-collector file-name)))))
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specs)))
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(org-babel-tangle-collect-blocks lang))
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2009-09-02 15:20:20 -04:00
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(message "tangled %d code block%s" block-counter
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(if (= block-counter 1) "" "s"))
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path-collector)))
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2009-06-26 14:43:50 -04:00
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2009-08-20 18:32:57 -04:00
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(defun org-babel-tangle-clean ()
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"Call this function inside of a source-code file generated by
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`org-babel-tangle' to remove all comments inserted automatically
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by `org-babel-tangle'. Warning, this comment removes any lines
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containing constructs which resemble org-mode file links or noweb
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references."
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(interactive)
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(goto-char (point-min))
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(while (or (re-search-forward "\\[\\[file:.*\\]\\[.*\\]\\]" nil t)
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(re-search-forward "<<[^[:space:]]*>>" nil t))
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Xemacs incompatibilities
Carsten Dominik <carsten.dominik@gmail.com> writes:
> On May 17, 2010, at 4:39 PM, Michael Sperber wrote:
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>> In particular, fixing the require won't be enough: org-babel-python.el
>> uses `run-python' and interacts with the inferior Python, whereas
>> python-mode.el defines `py-shell'.
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>> Should I try to abstract over the differences?
>
> Yes, this would be much appreciated. (I think, Eric or Dan?)
OK, I've attached a patch that makes `org-babel-python' work on XEmacs.
Most of the issues are pure XEmacs issues. Notes:
- XEmacs doesn't have [[:digit:]] - I hope to rectify this in the
future, but it seems there's no downside in this particular case to
replacing by [0-9].
- XEmacs doesn't have `move-end-of-line', but does have `end-of-line'.
I don't understand the intent of having both of these, but the code
seems fine with `end-of-line'.
- It seems there are way too few `require's throughout org-babel. I
don't know if it's OK to add the ones I needed.
- `org-babel-python-evaluate' looked broken as-is: It doesn't use the
`body' argument properly, the result is (I think) processed in the
wrong order and not properly split into lines. I've fixed all these,
but a review is probably in order.
2010-05-24 15:22:50 -04:00
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(delete-region (save-excursion (beginning-of-line 1) (point))
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(save-excursion (end-of-line 1) (forward-char 1) (point)))))
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2009-07-22 20:30:30 -04:00
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(defun org-babel-tangle-collect-blocks (&optional lang)
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"Collect all source blocks in the current org-mode file.
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Return an association list of source-code block specifications of
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the form used by `org-babel-spec-to-string' grouped by language.
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Optional argument LANG can be used to limit the collected source
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code blocks by language."
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2009-06-27 20:25:01 -04:00
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(let ((block-counter 0) blocks)
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(org-babel-map-source-blocks (buffer-file-name)
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(setq block-counter (+ 1 block-counter))
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(let* ((link (progn (call-interactively 'org-store-link)
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(org-babel-clean-text-properties
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(car (pop org-stored-links)))))
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(info (org-babel-get-src-block-info))
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(source-name (intern (or (nth 4 info)
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(format "block-%d" block-counter))))
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(src-lang (nth 0 info))
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(expand-cmd (intern (concat "org-babel-expand-body:" src-lang)))
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(params (nth 2 info))
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by-lang)
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(unless (string= (cdr (assoc :tangle params)) "no") ;; skip
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(unless (and lang (not (string= lang src-lang))) ;; limit by language
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;; add the spec for this block to blocks under it's language
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(setq by-lang (cdr (assoc src-lang blocks)))
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(setq blocks (delq (assoc src-lang blocks) blocks))
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(setq blocks
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(cons
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(cons src-lang
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(cons (list link source-name params
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((lambda (body)
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(if (assoc :no-expand params)
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body
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(funcall
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(if (fboundp expand-cmd)
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expand-cmd
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'org-babel-expand-body:generic)
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body
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params)))
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(if (and (cdr (assoc :noweb params))
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(string=
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"yes"
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(cdr (assoc :noweb params))))
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(org-babel-expand-noweb-references
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info)
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(nth 1 info))))
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by-lang)) blocks))))))
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;; ensure blocks in the correct order
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(setq blocks
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(mapcar
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(lambda (by-lang) (cons (car by-lang) (reverse (cdr by-lang))))
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blocks))
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blocks))
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2009-06-25 23:17:21 -04:00
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(defun org-babel-spec-to-string (spec)
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"Insert the source-code specified by SPEC into the current
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source code file. This function uses `comment-region' which
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assumes that the appropriate major-mode is set. SPEC has the
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form
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(link source-name params body)"
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(let ((link (nth 0 spec))
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(source-name (nth 1 spec))
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(body (nth 3 spec))
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(commentable (string= (cdr (assoc :comments (nth 2 spec))) "yes")))
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(flet ((insert-comment (text)
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(when (and commentable
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org-babel-tangle-w-comments)
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(insert "\n")
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(comment-region (point)
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(progn (insert text) (point)))
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(end-of-line nil)
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(insert "\n"))))
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(insert-comment (format "[[%s][%s]]" (org-link-escape link) source-name))
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2010-06-07 14:46:11 -04:00
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(insert (format "\n%s\n" (replace-regexp-in-string
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"^," "" (org-babel-chomp body))))
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(insert-comment (format "%s ends here" source-name)))))
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2009-06-15 18:35:11 -04:00
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2010-06-11 19:02:42 -04:00
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(provide 'ob-tangle)
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;;; ob-tangle.el ends here
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