org-mode/lisp/ob-dot.el

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;;; ob-dot.el --- org-babel functions for dot evaluation
;; Copyright (C) 2009, 2010 Free Software Foundation, Inc.
;; Author: Eric Schulte
;; Keywords: literate programming, reproducible research
;; Homepage: http://orgmode.org
2010-10-29 03:11:46 -04:00
;; Version: 7.02trans
;; This file is part of GNU Emacs.
;; GNU Emacs is free software: you can redistribute it and/or modify
;; it under the terms of the GNU General Public License as published by
;; the Free Software Foundation, either version 3 of the License, or
;; (at your option) any later version.
;; GNU Emacs is distributed in the hope that it will be useful,
;; but WITHOUT ANY WARRANTY; without even the implied warranty of
;; MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
;; GNU General Public License for more details.
;; You should have received a copy of the GNU General Public License
;; along with GNU Emacs. If not, see <http://www.gnu.org/licenses/>.
;;; Commentary:
;; Org-Babel support for evaluating dot source code.
;;
;; For information on dot see http://www.graphviz.org/
;;
;; This differs from most standard languages in that
;;
;; 1) there is no such thing as a "session" in dot
;;
;; 2) we are generally only going to return results of type "file"
;;
;; 3) we are adding the "file" and "cmdline" header arguments
;;
;; 4) there are no variables (at least for now)
;;; Code:
(require 'ob)
(require 'ob-eval)
(defvar org-babel-default-header-args:dot
'((:results . "file") (:exports . "results"))
"Default arguments to use when evaluating a dot source block.")
removing obsoleted optional third argument from org-babel-expand-body:LANG * lisp/ob-C.el (org-babel-expand-body:c++): removing obsoleted optional third argument (org-babel-expand-body:c++): removing obsoleted optional third argument (org-babel-C-expand): removing obsoleted optional third argument * lisp/ob-R.el: (org-babel-expand-body:R): removing obsoleted optional third argument (org-babel-execute:R): removing obsoleted optional third argument (org-babel-R-variable-assignments): removing obsoleted optional third argument * lisp/ob-asymptote.el: (org-babel-expand-body:asymptote): removing obsoleted optional third argument (org-babel-execute:asymptote): removing obsoleted optional third argument * lisp/ob-clojure.el: (org-babel-expand-body:clojure): removing obsoleted optional third argument (org-babel-execute:clojure): removing obsoleted optional third argument * lisp/ob-css.el: (org-babel-expand-body:css): removing obsoleted optional third argument * lisp/ob-ditaa.el: (org-babel-expand-body:ditaa): removing obsoleted optional third argument * lisp/ob-dot.el: (org-babel-expand-body:dot): removing obsoleted optional third argument (org-babel-execute:dot): removing obsoleted optional third argument * lisp/ob-emacs-lisp.el: (org-babel-expand-body:emacs-lisp): removing obsoleted optional third argument (org-babel-execute:emacs-lisp): removing obsoleted optional third argument * lisp/ob-gnuplot.el: (org-babel-expand-body:gnuplot): removing obsoleted optional third argument * lisp/ob-haskell.el: (org-babel-expand-body:haskell): removing obsoleted optional third argument (org-babel-execute:haskell): removing obsoleted optional third argument (org-babel-load-session:haskell): removing obsoleted optional third (org-babel-prep-session:haskell): removing obsoleted optional third * lisp/ob-js.el: (org-babel-expand-body:js): removing obsoleted optional third argument (org-babel-execute:js): removing obsoleted optional third argument * lisp/ob-latex.el: (org-babel-expand-body:latex): removing obsoleted optional third argument * lisp/ob-lisp.el: (org-babel-expand-body:lisp): removing obsoleted optional third argument (org-babel-execute:lisp): removing obsoleted optional third argument * lisp/ob-mscgen.el: (org-babel-expand-body:mscgen): removing obsoleted optional third argument * lisp/ob-ocaml.el: (org-babel-expand-body:ocaml): removing obsoleted optional third argument (org-babel-execute:ocaml): removing obsoleted optional third argument * lisp/ob-octave.el: (org-babel-expand-body:matlab): removing obsoleted optional third argument (org-babel-expand-body:octave): removing obsoleted optional third argument (org-babel-execute:octave): removing obsoleted optional third argument (org-babel-octave-variable-assignments): removing obsoleted optional third * lisp/ob-org.el: (org-babel-expand-body:org): removing obsoleted optional third argument * lisp/ob-perl.el: (org-babel-expand-body:perl): removing obsoleted optional third argument (org-babel-execute:perl): removing obsoleted optional third argument * lisp/ob-plantuml.el: (org-babel-expand-body:plantuml): removing obsoleted optional third argument * lisp/ob-python.el: (org-babel-expand-body:python): removing obsoleted optional third argument (org-babel-execute:python): removing obsoleted optional third argument (org-babel-python-variable-assignments): removing obsoleted optional third * lisp/ob-ruby.el: (org-babel-expand-body:ruby): removing obsoleted optional third argument (org-babel-execute:ruby): removing obsoleted optional third argument * lisp/ob-sass.el: (org-babel-expand-body:sass): removing obsoleted optional third argument * lisp/ob-scheme.el: (org-babel-expand-body:scheme): removing obsoleted optional third argument (org-babel-execute:scheme): removing obsoleted optional third argument * lisp/ob-screen.el: (org-babel-expand-body:screen): removing obsoleted optional third argument * lisp/ob-sh.el: (org-babel-expand-body:sh): removing obsoleted optional third argument (org-babel-execute:sh): removing obsoleted optional third argument (org-babel-sh-variable-assignments): removing obsoleted optional third * lisp/ob-sql.el: (org-babel-expand-body:sql): removing obsoleted optional third argument * lisp/ob-sqlite.el: (org-babel-expand-body:sqlite): removing obsoleted optional third argument (org-babel-execute:sqlite): removing obsoleted optional third argument * lisp/ob.el: (org-babel-expand-body:generic): removing obsoleted optional third argument
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(defun org-babel-expand-body:dot (body params)
"Expand BODY according to PARAMS, return the expanded body."
removing obsoleted optional third argument from org-babel-expand-body:LANG * lisp/ob-C.el (org-babel-expand-body:c++): removing obsoleted optional third argument (org-babel-expand-body:c++): removing obsoleted optional third argument (org-babel-C-expand): removing obsoleted optional third argument * lisp/ob-R.el: (org-babel-expand-body:R): removing obsoleted optional third argument (org-babel-execute:R): removing obsoleted optional third argument (org-babel-R-variable-assignments): removing obsoleted optional third argument * lisp/ob-asymptote.el: (org-babel-expand-body:asymptote): removing obsoleted optional third argument (org-babel-execute:asymptote): removing obsoleted optional third argument * lisp/ob-clojure.el: (org-babel-expand-body:clojure): removing obsoleted optional third argument (org-babel-execute:clojure): removing obsoleted optional third argument * lisp/ob-css.el: (org-babel-expand-body:css): removing obsoleted optional third argument * lisp/ob-ditaa.el: (org-babel-expand-body:ditaa): removing obsoleted optional third argument * lisp/ob-dot.el: (org-babel-expand-body:dot): removing obsoleted optional third argument (org-babel-execute:dot): removing obsoleted optional third argument * lisp/ob-emacs-lisp.el: (org-babel-expand-body:emacs-lisp): removing obsoleted optional third argument (org-babel-execute:emacs-lisp): removing obsoleted optional third argument * lisp/ob-gnuplot.el: (org-babel-expand-body:gnuplot): removing obsoleted optional third argument * lisp/ob-haskell.el: (org-babel-expand-body:haskell): removing obsoleted optional third argument (org-babel-execute:haskell): removing obsoleted optional third argument (org-babel-load-session:haskell): removing obsoleted optional third (org-babel-prep-session:haskell): removing obsoleted optional third * lisp/ob-js.el: (org-babel-expand-body:js): removing obsoleted optional third argument (org-babel-execute:js): removing obsoleted optional third argument * lisp/ob-latex.el: (org-babel-expand-body:latex): removing obsoleted optional third argument * lisp/ob-lisp.el: (org-babel-expand-body:lisp): removing obsoleted optional third argument (org-babel-execute:lisp): removing obsoleted optional third argument * lisp/ob-mscgen.el: (org-babel-expand-body:mscgen): removing obsoleted optional third argument * lisp/ob-ocaml.el: (org-babel-expand-body:ocaml): removing obsoleted optional third argument (org-babel-execute:ocaml): removing obsoleted optional third argument * lisp/ob-octave.el: (org-babel-expand-body:matlab): removing obsoleted optional third argument (org-babel-expand-body:octave): removing obsoleted optional third argument (org-babel-execute:octave): removing obsoleted optional third argument (org-babel-octave-variable-assignments): removing obsoleted optional third * lisp/ob-org.el: (org-babel-expand-body:org): removing obsoleted optional third argument * lisp/ob-perl.el: (org-babel-expand-body:perl): removing obsoleted optional third argument (org-babel-execute:perl): removing obsoleted optional third argument * lisp/ob-plantuml.el: (org-babel-expand-body:plantuml): removing obsoleted optional third argument * lisp/ob-python.el: (org-babel-expand-body:python): removing obsoleted optional third argument (org-babel-execute:python): removing obsoleted optional third argument (org-babel-python-variable-assignments): removing obsoleted optional third * lisp/ob-ruby.el: (org-babel-expand-body:ruby): removing obsoleted optional third argument (org-babel-execute:ruby): removing obsoleted optional third argument * lisp/ob-sass.el: (org-babel-expand-body:sass): removing obsoleted optional third argument * lisp/ob-scheme.el: (org-babel-expand-body:scheme): removing obsoleted optional third argument (org-babel-execute:scheme): removing obsoleted optional third argument * lisp/ob-screen.el: (org-babel-expand-body:screen): removing obsoleted optional third argument * lisp/ob-sh.el: (org-babel-expand-body:sh): removing obsoleted optional third argument (org-babel-execute:sh): removing obsoleted optional third argument (org-babel-sh-variable-assignments): removing obsoleted optional third * lisp/ob-sql.el: (org-babel-expand-body:sql): removing obsoleted optional third argument * lisp/ob-sqlite.el: (org-babel-expand-body:sqlite): removing obsoleted optional third argument (org-babel-execute:sqlite): removing obsoleted optional third argument * lisp/ob.el: (org-babel-expand-body:generic): removing obsoleted optional third argument
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(let ((vars (mapcar #'cdr (org-babel-get-header params :var))))
(mapc
(lambda (pair)
(let ((name (symbol-name (car pair)))
(value (cdr pair)))
(setq body
(replace-regexp-in-string
(concat "\$" (regexp-quote name))
(if (stringp value) value (format "%S" value))
body))))
vars)
body))
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(defun org-babel-execute:dot (body params)
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"Execute a block of Dot code with org-babel.
This function is called by `org-babel-execute-src-block'."
babel:removing calls to ob-process-params, and updating use of results * lisp/ob-C.el (org-babel-C-execute): removing call to org-babel-process-params which should no longer be called from within a language file * lisp/ob-R.el (org-babel-execute:R): removing call to org-babel-process-params which should no longer be called from within a language file (org-babel-R-variable-assignments): removing call to org-babel-process-params which should no longer be called from within a language file * lisp/ob-asymptote.el (org-babel-execute:asymptote): removing call to org-babel-process-params which should no longer be called from within a language file * lisp/ob-clojure.el (org-babel-execute:clojure): removing call to org-babel-process-params which should no longer be called from within a language file * lisp/ob-dot.el (org-babel-execute:dot): removing call to org-babel-process-params which should no longer be called from within a language file * lisp/ob-emacs-lisp.el (org-babel-expand-body:emacs-lisp): removing call to org-babel-process-params which should no longer be called from within a language file (org-babel-execute:emacs-lisp): removing call to org-babel-process-params which should no longer be called from within a language file * lisp/ob-haskell.el (org-babel-execute:haskell): removing call to org-babel-process-params which should no longer be called from within a language file * lisp/ob-js.el (org-babel-execute:js): removing call to org-babel-process-params which should no longer be called from within a language file * lisp/ob-lisp.el (org-babel-execute:lisp): removing call to org-babel-process-params which should no longer be called from within a language file * lisp/ob-ocaml.el (org-babel-execute:ocaml): removing call to org-babel-process-params which should no longer be called from within a language file * lisp/ob-octave.el (org-babel-execute:octave): removing call to org-babel-process-params which should no longer be called from within a language file * lisp/ob-perl.el (org-babel-execute:perl): removing call to org-babel-process-params which should no longer be called from within a language file * lisp/ob-python.el (org-babel-execute:python): removing call to org-babel-process-params which should no longer be called from within a language file * lisp/ob-ruby.el (org-babel-execute:ruby): removing call to org-babel-process-params which should no longer be called from within a language file * lisp/ob-scheme.el (org-babel-execute:scheme): removing call to org-babel-process-params which should no longer be called from within a language file * lisp/ob-screen.el (org-babel-execute:screen): removing call to org-babel-process-params which should no longer be called from within a language file (org-babel-prep-session:screen): removing call to org-babel-process-params which should no longer be called from within a language file * lisp/ob-sh.el (org-babel-execute:sh): removing call to org-babel-process-params which should no longer be called from within a language file * lisp/ob-sql.el (org-babel-execute:sql): removing call to org-babel-process-params which should no longer be called from within a language file * ob-haskell.el (org-babel-execute:haskell): Remove reference to processed params * ob-clojure.el (org-babel-execute:clojure): Remove reference to processed params * ob-R.el (org-babel-execute:R): Remove reference to processed params
2010-10-21 07:52:24 -04:00
(let* ((result-params (cdr (assoc :result-params params)))
(out-file (cdr (assoc :file params)))
(cmdline (or (cdr (assoc :cmdline params))
(format "-T%s" (file-name-extension out-file))))
(cmd (or (cdr (assoc :cmd params)) "dot"))
(in-file (org-babel-temp-file "dot-")))
(with-temp-file in-file
removing obsoleted optional third argument from org-babel-expand-body:LANG * lisp/ob-C.el (org-babel-expand-body:c++): removing obsoleted optional third argument (org-babel-expand-body:c++): removing obsoleted optional third argument (org-babel-C-expand): removing obsoleted optional third argument * lisp/ob-R.el: (org-babel-expand-body:R): removing obsoleted optional third argument (org-babel-execute:R): removing obsoleted optional third argument (org-babel-R-variable-assignments): removing obsoleted optional third argument * lisp/ob-asymptote.el: (org-babel-expand-body:asymptote): removing obsoleted optional third argument (org-babel-execute:asymptote): removing obsoleted optional third argument * lisp/ob-clojure.el: (org-babel-expand-body:clojure): removing obsoleted optional third argument (org-babel-execute:clojure): removing obsoleted optional third argument * lisp/ob-css.el: (org-babel-expand-body:css): removing obsoleted optional third argument * lisp/ob-ditaa.el: (org-babel-expand-body:ditaa): removing obsoleted optional third argument * lisp/ob-dot.el: (org-babel-expand-body:dot): removing obsoleted optional third argument (org-babel-execute:dot): removing obsoleted optional third argument * lisp/ob-emacs-lisp.el: (org-babel-expand-body:emacs-lisp): removing obsoleted optional third argument (org-babel-execute:emacs-lisp): removing obsoleted optional third argument * lisp/ob-gnuplot.el: (org-babel-expand-body:gnuplot): removing obsoleted optional third argument * lisp/ob-haskell.el: (org-babel-expand-body:haskell): removing obsoleted optional third argument (org-babel-execute:haskell): removing obsoleted optional third argument (org-babel-load-session:haskell): removing obsoleted optional third (org-babel-prep-session:haskell): removing obsoleted optional third * lisp/ob-js.el: (org-babel-expand-body:js): removing obsoleted optional third argument (org-babel-execute:js): removing obsoleted optional third argument * lisp/ob-latex.el: (org-babel-expand-body:latex): removing obsoleted optional third argument * lisp/ob-lisp.el: (org-babel-expand-body:lisp): removing obsoleted optional third argument (org-babel-execute:lisp): removing obsoleted optional third argument * lisp/ob-mscgen.el: (org-babel-expand-body:mscgen): removing obsoleted optional third argument * lisp/ob-ocaml.el: (org-babel-expand-body:ocaml): removing obsoleted optional third argument (org-babel-execute:ocaml): removing obsoleted optional third argument * lisp/ob-octave.el: (org-babel-expand-body:matlab): removing obsoleted optional third argument (org-babel-expand-body:octave): removing obsoleted optional third argument (org-babel-execute:octave): removing obsoleted optional third argument (org-babel-octave-variable-assignments): removing obsoleted optional third * lisp/ob-org.el: (org-babel-expand-body:org): removing obsoleted optional third argument * lisp/ob-perl.el: (org-babel-expand-body:perl): removing obsoleted optional third argument (org-babel-execute:perl): removing obsoleted optional third argument * lisp/ob-plantuml.el: (org-babel-expand-body:plantuml): removing obsoleted optional third argument * lisp/ob-python.el: (org-babel-expand-body:python): removing obsoleted optional third argument (org-babel-execute:python): removing obsoleted optional third argument (org-babel-python-variable-assignments): removing obsoleted optional third * lisp/ob-ruby.el: (org-babel-expand-body:ruby): removing obsoleted optional third argument (org-babel-execute:ruby): removing obsoleted optional third argument * lisp/ob-sass.el: (org-babel-expand-body:sass): removing obsoleted optional third argument * lisp/ob-scheme.el: (org-babel-expand-body:scheme): removing obsoleted optional third argument (org-babel-execute:scheme): removing obsoleted optional third argument * lisp/ob-screen.el: (org-babel-expand-body:screen): removing obsoleted optional third argument * lisp/ob-sh.el: (org-babel-expand-body:sh): removing obsoleted optional third argument (org-babel-execute:sh): removing obsoleted optional third argument (org-babel-sh-variable-assignments): removing obsoleted optional third * lisp/ob-sql.el: (org-babel-expand-body:sql): removing obsoleted optional third argument * lisp/ob-sqlite.el: (org-babel-expand-body:sqlite): removing obsoleted optional third argument (org-babel-execute:sqlite): removing obsoleted optional third argument * lisp/ob.el: (org-babel-expand-body:generic): removing obsoleted optional third argument
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(insert (org-babel-expand-body:dot body params)))
babel: New function to process file names for use in external processes * ob.el (org-babel-process-file-name): New function (org-babel-maybe-remote-file): Delete function * ob-sql.el (org-babel-execute:sql): Use org-babel-process-file-name * ob-scheme.el (org-babel-execute:scheme): Use org-babel-process-file-name * ob-sass.el (org-babel-execute:sass): Use org-babel-process-file-name * ob-ruby.el (org-babel-ruby-evaluate): Use org-babel-process-file-name * ob-python.el (org-babel-python-evaluate-external-process): Use org-babel-process-file-name (org-babel-python-evaluate-session): Use org-babel-process-file-name * ob-plantuml.el (org-babel-execute:plantuml): Use org-babel-process-file-name * ob-perl.el (org-babel-perl-evaluate): Use org-babel-process-file-name * ob-octave.el (org-babel-octave-evaluate-external-process): Use org-babel-process-file-name (org-babel-octave-evaluate-session): Use org-babel-process-file-name, don't use org-babel-maybe-remote-file * ob-lisp.el (org-babel-execute:lisp): Use org-babel-process-file-name * ob-ledger.el (org-babel-execute:ledger): Use org-babel-process-file-name * ob-js.el (org-babel-execute:js): Use org-babel-process-file-name * ob-haskell.el (org-babel-haskell-export-to-lhs): Use org-babel-process-file-name * ob-gnuplot.el (org-babel-execute:gnuplot): Use org-babel-process-file-name * ob-eval.el (org-babel-eval-read-file): Don't use org-babel-maybe-remote-file * ob-dot.el (org-babel-execute:dot): Use org-babel-process-file-name * ob-ditaa.el (org-babel-execute:ditaa): Use org-babel-process-file-name * ob-clojure.el (org-babel-clojure-evaluate-external-process): Use org-babel-process-file-name * ob-asymptote.el (org-babel-execute:asymptote): Use org-babel-process-file-name * ob-R.el (org-babel-R-assign-elisp): Don't use org-babel-maybe-remote-file, use org-babel-process-file-name (org-babel-R-evaluate-external-process): Use org-babel-process-file-name (org-babel-R-evaluate-session): Use org-babel-process-file-name * ob-C.el (org-babel-C-execute): Use org-babel-process-file-name In addition to passing the file path through `expand-file-name', tramp-style remote file names are converted to conventional (local) file paths. The reason is that, if a tramp file name was in use in emacs, then the shell command will be executing on the remote machine in question. Further, by default the file name is passed through `shell-quote-argument'.
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(org-babel-eval
(concat cmd
" " (org-babel-process-file-name in-file)
" " cmdline
" -o " (org-babel-process-file-name out-file)) "")
out-file))
(defun org-babel-prep-session:dot (session params)
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"Return an error because Dot does not support sessions."
(error "Dot does not support sessions"))
(provide 'ob-dot)
;; arch-tag: 817d0516-7b47-4f77-a8b2-2aadd8e4d0e2
;;; ob-dot.el ends here