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R-based solution to variable-row-length tables

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Thomas Dye 2012-04-25 14:11:06 -04:00 committed by Eric Schulte
parent 4908ea99ed
commit 870b4e3c9d
1 changed files with 8 additions and 2 deletions
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10
lisp/ob-R.el
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@ -173,10 +173,16 @@ This function is called by `org-babel-execute-src-block'."
(with-temp-file transition-file (with-temp-file transition-file
(insert (orgtbl-to-tsv value '(:fmt org-babel-R-quote-tsv-field))) (insert (orgtbl-to-tsv value '(:fmt org-babel-R-quote-tsv-field)))
(insert "\n")) (insert "\n"))
(format "%s <- read.table(\"%s\", header=%s, row.names=%s, sep=\"\\t\", as.is=TRUE)" (format "if (max(count.fields(\"%s\", sep=\"\\t\")) == min(count.fields(\"%s\", sep=\"\\t\"))) %s <- read.table(\"%s\", header=%s, row.names=%s, sep=\"\\t\", as.is=TRUE) else %s <- read.table(\"%s\", header=%s, row.names=%s, sep=\"\\t\", as.is=TRUE, fill=TRUE, col.names = paste(\"V\", seq_len(max(count.fields(\"%s\", sep=\"\\t\"))), sep =\"\"))"
(org-babel-process-file-name transition-file 'noquote)
(org-babel-process-file-name transition-file 'noquote)
name (org-babel-process-file-name transition-file 'noquote) name (org-babel-process-file-name transition-file 'noquote)
(if (or (eq (nth 1 value) 'hline) colnames-p) "TRUE" "FALSE") (if (or (eq (nth 1 value) 'hline) colnames-p) "TRUE" "FALSE")
(if rownames-p "1" "NULL"))) (if rownames-p "1" "NULL")
name (org-babel-process-file-name transition-file 'noquote)
(if (or (eq (nth 1 value) 'hline) colnames-p) "TRUE" "FALSE")
(if rownames-p "1" "NULL")
(org-babel-process-file-name transition-file 'noquote)))
(format "%s <- %s" name (org-babel-R-quote-tsv-field value)))) (format "%s <- %s" name (org-babel-R-quote-tsv-field value))))
(defvar ess-ask-for-ess-directory nil) (defvar ess-ask-for-ess-directory nil)