2081b95410
Revert "org-babel-comint-with-output is now fully self-contained and side-effect free"
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This seems to be causing problems...
This reverts commit 0573fc4d9c
2009-06-11 12:55:39 -07:00
dc551fab04
beefed up org-babel-comint-wait-for-output but it still sometimes misses multiple outputs
2009-06-11 12:44:14 -07:00
f5481ab666
looks like out comint waiting function needs some work...
2009-06-11 12:35:48 -07:00
0573fc4d9c
org-babel-comint-with-output is now fully self-contained and side-effect free
2009-06-11 12:16:37 -07:00
eacce7b29d
`org-babel-comint-in-buffer' now declares it's indentation
2009-06-11 07:32:31 -07:00
aa410df722
added nice little macro to capture output
2009-06-10 22:18:59 -07:00
8d0fd18933
working on org-babel-comint for automatically keeping a ring
2009-06-10 17:27:06 -07:00
23c61abf90
more robust org-babel-chomp
2009-06-10 16:17:04 -07:00
9c70974391
started working on ruby 'script' execution
2009-06-09 16:33:36 -07:00
f3da4d0321
functional results now working with org-babel-comint and org-babel-script
2009-06-09 16:10:43 -07:00
39d1674f30
org-babel-R is now able to assign variables
2009-06-09 15:28:59 -07:00
d3f1d07066
org-babel-R can now run in 'script' mode
2009-06-09 15:02:01 -07:00
4da3ddc623
Merge branch 'session' of git@github.com:eschulte/org-babel into session
2009-06-08 15:05:08 -07:00
cdb41f5106
working on org-babel-script.el (winnowing, and using org-babel-comint.el)
2009-06-08 15:03:04 -07:00
1e4c3389b6
As was just done for branch master, removing all support for hlines/colnames -- they persist in branch rowcolnames. Also removing comments. These should never have been present in this branch.
2009-06-06 18:12:42 -04:00
b533d9d446
cleaned up org-babel-comint and removed helper functions
2009-06-03 20:52:01 -07:00
fe75562a64
org-babel-comint is basically working
2009-06-03 20:51:36 -07:00
e1aeec8ab1
begun implementing org-babel-comint
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a collection of functions to simplify interaction with comint-mode
buffers
2009-06-03 20:18:18 -07:00
c175d3ce0d
playing with org-babel-script and comint buffers/functions
2009-06-03 17:37:50 -07:00
2a663b9e09
R is now using last output (with default session) and passing all tests
2009-06-03 15:59:27 -07:00
49db1e523c
Merge branch 'master' into session
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Conflicts:
org-babel.org
2009-06-03 15:30:10 -07:00
39f7174884
Revert "Revert "Make org table result have header row and hline when appropriate...""
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This reverts commit dff01091dc
2009-06-03 15:26:32 -07:00
02b265b2e3
Reverted tentative and hackish support for hline in R output. I have left a commented line and an unused function while I am thinking about this, and pending me learning git better. However I haven't yet reverted the ability of R to recognise hlines in var references, so the grades example still works. All sbe tests are passed.
2009-06-03 12:09:52 -04:00
dff01091dc
Revert "Make org table result have header row and hline when appropriate..."
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This reverts commit e4263daf76
2009-06-02 16:29:30 -07:00
bba80bb837
working on sessions
2009-06-02 16:26:57 -07:00
c38294d21f
DONE Remove protective commas from # comments before evaluating
2009-06-01 16:56:59 -07:00
e4263daf76
Make org table result have header row and hline when appropriate. (This should have been included with commit a39d68640e). The approach I've taken is to make R always write the column names into the tsv file. If the result does not have user-supplied column-names, then R writes default column names of the form V1,V2,...,V$numcols. After reading the tsv back into lisp, we check whether it has "real" column names or the R defaults. If it has real column names, then I give the org table an hline.
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I expect this will conflict with Eric's work on sessions, but we can deal with that.
There is a remaining quoting issue that needs to be dealt
with. E.g. with an unquoted string in the input, it comes out as
quoted in the result. This seems bad, since if you use the output as
new input you get something different (with extra
quoting). (non-idempotence if that's the right term).
| col1 | col2 | col3 |
|------+---------+------|
| 1 | 2 | 3 |
| 4 | schulte | 6 |
tabel
| "col1" | "col2" | "col3" |
|--------+-----------+--------|
| 1 | 2 | 3 |
| 4 | "schulte" | 6 |
2009-05-30 16:45:26 -04:00
eb29bef93f
Made org-babel-remove-result interactive. Eric if you agree do you want to decide on a binding?
2009-05-30 15:59:46 -04:00
a39d68640e
Allowing org-tables with hline to be referred to and passed into R. If hline is present, the first row of the table becomes the column names in R. This allows the grades example to run for me which was not true before. Eric: any commits I make should be viewed as tentative -- feel free to reject or recode them.
2009-05-30 15:00:06 -04:00
2ca59eaa0f
Preventing end of buffer error when no newline after #+end_src
2009-05-29 23:34:50 -04:00
d49084b73d
small additions to org-babel-comint.el
2009-05-29 17:45:40 -07:00
c5a58ad6aa
moving generalized comint functions to new file org-babel-comint.el
2009-05-27 19:00:13 -07:00
2c3c91ed12
removed org-babel-ui (tabbing blocks) as the functionality will be included in org-mode core
2009-05-27 16:34:48 -07:00
9aa713be8c
updated tag line
2009-05-24 14:10:03 -07:00
6614df037f
now passing all tests with new name "org-babel"
2009-05-24 14:08:02 -07:00
9247200bb0
renaming the org-babel/ directory to the lisp/ directory
2009-05-24 13:56:20 -07:00
Eric Schulte
Dan Davison