Commit Graph

52 Commits

Author SHA1 Message Date
Dan Davison 4ba43552c0 new tasks: selective export of code/text, code block folding, interactive session output -> litorgy conversion 2009-04-13 14:37:30 -04:00
Eric Schulte 54dcc1f4f8 resolved bug mentioned rorg.org 2009-04-05 19:22:50 -07:00
Eric Schulte d5bbedbbc0 adding notes to TODOs in rorg.el 2009-04-05 16:27:14 -07:00
Eric Schulte f27741e468 now results of shell commands are also converted into tables when appropriate 2009-04-05 10:11:31 -07:00
Eric Schulte 9bfd6e0a80 now when R blocks return trivial vectors they are converted into scalars
Apparently there are no scalars values in R, scalars are packaged into
vectors, which would result in many single element tables

| scalar |

if we just dropped them straight to emacs-lisp without this conversion
2009-04-05 09:46:11 -07:00
Eric Schulte 834dd2908f R source blocks can now read in variables from org-mode tables, and insert results as org tables 2009-04-04 16:24:06 -07:00
Eric Schulte f8d76eb030 org-R-to-elisp is working
it is now able to
1) write the R function to a tab separated table
2) read that table into elisp and return
3) clean up after itself
2009-04-04 16:24:05 -07:00
Eric Schulte a9bb21865d more opining about R tables 2009-04-04 16:24:04 -07:00
Eric Schulte 3e403fc9bb R support partially working assigning variables from R
still need to figure out how to deal with R tables
2009-04-04 16:24:03 -07:00
Eric Schulte 0e29fb3601 now assigning variables from source-code blocks in multiple languages
Currently ruby, python, and emacs-lisp are working; still need to work
on shells and R.
2009-04-02 20:02:56 -07:00
Eric Schulte 77c33de593 now able to assign variables from emacs-lisp source blocks 2009-04-02 17:59:55 -07:00
Eric Schulte 91dea38923 adding TODOs to rorg.org 2009-04-01 15:59:33 -07:00
Eric Schulte 3657836968 added optional insertion of results...
from the description of litorgy-insert-result:

   Insert RESULT into the current buffer after the end of the
current source block.  With optional argument INSERT controls
insertion of results in the org-mode file.  INSERT can take the
following values...

t ------ the default options, simply insert the results after the
         source block

replace - insert results after the source block replacing any
          previously inserted results

silent -- no results are inserted
2009-04-01 15:46:55 -07:00
Eric Schulte e770100002 replaced support for shells 2009-03-31 16:11:41 -07:00
Eric Schulte 0ca4b60bb6 minor updates to rorg.org
fleshing out TODOs
2009-03-31 16:11:40 -07:00
Dan Davison 15741e1e69 minor edits to rorg.org 2009-03-31 14:54:19 -04:00
Dan Davison 1896489b6a moved active parts of rorg.org to top, and added bugs section 2009-03-31 10:24:15 -04:00
Dan Davison d8f8161be5 TODO item: evaluation as background process? 2009-03-31 09:51:27 -04:00
Dan Davison d14690e4cf Merge branch 'master' of git@github.com:eschulte/rorg 2009-03-31 09:49:11 -04:00
Eric Schulte fc21c4b559 adding support for R source code blocks 2009-03-29 15:09:06 -07:00
Eric Schulte d1230c6ea5 litorgy-script is now functional and plays nice w/matrix output
- litorgy-script no longer handles shell scripts
 - litorgy-script now inserts the *return value* of the source block,
    rather than inserting what was printed to STDOUT
 - now able to handle table output from ruby and python source blocks
2009-03-28 19:38:45 -07:00
Eric Schulte c814a9f3e8 table assignment now working for ruby and python 2009-03-28 14:49:08 -07:00
Dan Davison 17a1d71e6a Merge branch 'master' of git@github.com:eschulte/rorg 2009-03-26 11:01:46 -04:00
Eric Schulte b9dc839e33 added demonstration of the reading/writing of tables to rorg.org 2009-03-25 16:22:27 -07:00
Dan Davison 080a1634d7 Merge branch 'master' of git@github.com:eschulte/rorg 2009-03-23 23:42:17 -04:00
Eric Schulte 74498d6055 thinking about and stubbing out functions for referencing external resources 2009-03-23 17:01:11 -07:00
Dan Davison 78c3dc7fb1 Merge branch 'master' of git@github.com:eschulte/rorg 2009-03-05 11:17:09 +00:00
Dan Davison aae046e55e minor edits, starting to add litorgy-R tasks as they crop up during use 2009-03-05 11:16:45 +00:00
Eric Schulte 47e18380e9 getting too excited and thinking about distributed computing 2009-03-04 18:14:42 -08:00
Eric Schulte 2f12591e5a adding thoughts about referencing data to rorg.org, see
**** Eric: referencing data in general
2009-03-04 17:22:28 -08:00
Eric Schulte e292e34041 minor additions to rorg.org 2009-02-23 17:58:18 -08:00
Eric Schulte 715998c107 adding R support for litorgy 2009-02-23 16:08:16 -08:00
Eric Schulte a942f75543 adding thoughts about free, explicit, independent variables 2009-02-23 15:15:23 -08:00
Eric Schulte f7d0dd1fda adding a replace option, and simplified result insertion 2009-02-22 22:19:56 -08:00
Eric Schulte 7c51afb642 Added litorgy.el which begins with the most fundamental step of our
implementation, see rorg.org for more information and examples.
2009-02-22 13:19:43 -08:00
Dan Davison a81fe7e15b some thoughts on referencing data from R 2009-02-12 11:07:25 -05:00
Eric Schulte 1dd3e1c330 some replies and some interesting scoping discussion from the email 2009-02-11 08:08:34 -08:00
Dan Davison 46f6a0a084 Some minor responses 2009-02-10 20:18:20 -05:00
Eric Schulte 090e5a12ae small addition to the proposed block format 2009-02-10 14:21:06 -08:00
Eric Schulte d26a98d71a I've done a fairly destructive edit of this file. The main goal was
to enforce a structure on the document that we can use moving forward,
so that any future objective changes are all made to the main
objective list.

I apologize for removing sections written by other people.  I did this
when they were redundant or it was not clear how to fit them into this
structure.  Rest assured if the previous text wasn't persisted in git
I would have been much more cautious about removing it.

I hope that this outline structure should be able to remain stable
through the process of fleshing out objectives, and cashing those
objectives out into tasks.  That said, please feel free to make any
changes that you see fit.

Changes include...
- tearing stuff out, and imposing structure
- updated .gitignore to ignore exported files
2009-02-09 14:43:07 -08:00
Dan Davison ea31e3a9c3 writing overview section at top of rorg.org 2009-02-08 15:00:28 -05:00
Dan Davison cf31c1f134 Trying to write a project overview at top of rorg.org 2009-02-08 13:11:22 -05:00
Eric Schulte bdae433d69 I added a couple of things listed below. I happy with the way this is
progressing so far.  It's nice to work on a project where everyone
uses org-mode.

additions:
- proposal for how we should implement the R-source-code blocks
- example of source code evaluation using org-eval-light.el
- notes section on evaluation of R code
- some scattered thoughts/suggestions
2009-02-06 15:45:59 -08:00
Dan Davison 0c418c5e2a rorg.org additions 2009-02-05 21:15:09 -05:00
Austin F. Frank eeaecdf7ee merge Eric and Austin's notes on special block types 2009-02-05 20:07:09 -05:00
Austin F. Frank 6201f77b1c rearrange Eric's notes 2009-02-05 19:59:19 -05:00
Austin F. Frank f173099443 merge Eric's notes and mine 2009-02-05 19:56:26 -05:00
Austin F. Frank cf1996f365 explanation and implementation notes for editing R code in org 2009-02-05 19:37:17 -05:00
Eric Schulte 79ca346be8 adding to rorg.org 2009-02-05 16:00:05 -08:00
Austin F. Frank a7c75dd901 Filled in more details about first objective. 2009-02-05 18:54:46 -05:00