Eric Schulte
2139651c0d
babel: org-babel-clean-text-properties now checks for valid argument
...
thanks to Michael Sperber for pointing this out
2010-05-17 17:13:20 -06:00
Eric Schulte
236f209b25
babel: changes to org-babel key bindings
2010-05-17 17:08:32 -06:00
Carsten Dominik
38b4fcc90c
XEmacs compatibility
2010-05-14 14:40:44 +02:00
Eric Schulte
b7555ae433
babel: new keymap `org-babel-map' and new prefix keys "C-c C-v"
2010-05-12 23:51:41 -06:00
Carsten Dominik
4b1ee671b8
Merge branch 'master' of git+ssh://repo.or.cz/srv/git/org-mode
2010-05-11 23:31:38 +02:00
Carsten Dominik
7a0619cbe8
Fix bug in org-git-link.el
2010-05-11 23:31:30 +02:00
Eric Schulte
98af57cdbd
babel: ob-sh.el now respects the :results "scalar" option
2010-05-07 17:18:38 -06:00
Eric Schulte
37f9639a43
Merge branch 'master' of git+ssh://repo.or.cz/srv/git/org-mode
2010-05-04 09:58:25 -06:00
Eric Schulte
a16e887fff
org-mime: now using `temporary-file-directory' instead of "/tmp" -- thanks to Uday S Reddy for catching this
2010-05-04 09:49:07 -06:00
Dan Davison
2d1025298e
babel: More concise matlab/octave code template
...
Patch by Christopher Long
2010-05-03 21:45:27 -04:00
Dan Davison
245d98786d
babel: matlab: detect end of evaluation under Emacs Link
...
Currently, this uses the presence of a temporary file to signal that
Matlab Emacs Link evaluation is not yet complete.
Emacs Link support added in collaboration with Christopher Long.
2010-05-03 21:45:01 -04:00
Benjamin Andresen
c133dd394e
babel: Fix org-babel-screen after expand changes
2010-05-02 21:30:13 -04:00
Dan Davison
d2b9343029
babel: Avoid trouble with '%' in matlab/octave output
...
Patch by Christopher Long
2010-05-02 18:26:22 -04:00
Dan Davison
65a98e3282
babel: fix editing error in org-babel-octave.el
2010-05-02 00:41:53 -04:00
Dan Davison
1a43a5939b
Merge branch 'octave-matlab'
2010-04-30 18:26:37 -04:00
Dan Davison
a61de7b130
babel: matlab: don't try matlab-shell if using emacs link
2010-04-30 18:23:36 -04:00
Eric Schulte
a3cc050a96
babel: `org-babel-get-colnames' no longer requires hline
2010-04-30 13:03:46 -06:00
Dan Davison
6f399c20b6
babel: Allow EmacsLink to be used for matlab session evaluation
...
To use EmacsLink, the user will need to set
org-babel-matlab-with-emacs-link to a non-nil value, and also arrange
that (matlab-with-emacs-link) evaluates to a non-nil value.
2010-04-30 14:39:31 -04:00
Dan Davison
10a07a644b
babel: R: allow forcing of colnames without hline
2010-04-30 14:14:27 -04:00
Dan Davison
7f3e64bfb4
babel: R: output colnames when other languages would
2010-04-30 14:14:13 -04:00
Robert P. Goldman
413e6b4eee
Add handling of blockquote and output formats that must be flowed.
...
Added a handler for blockquotes.
Also added :body-newline-paragraph to the org-set-generic-type. This is
intended to help handling output formats (like tikiwiki) where newlines are
treated as paragraph separators, instead of being used to fill (i.e., the
destination is expected to do the word-wrapping). If this is set to T then
org-export-generic will emit a newline character when it sees a blank
line. This should be used in concert with a value like "%s " for
:body-line-format and nil for :body-line-wrap.
2010-04-29 15:57:03 +02:00
Eric Schulte
6a1f5b2bcb
babel: ob-emacs-lisp now wraps body in a progn on execute
2010-04-27 13:55:48 -06:00
Dan Davison
837e898936
babel: Fall back to generic expand function during tangling
2010-04-27 15:02:55 -04:00
Eric Schulte
44bb82d38e
babel: `org-babel-ref-resolve-reference' doesn't break paren nesting when resolving indicies
2010-04-24 13:26:34 -06:00
Eric Schulte
b8adc74894
babel: ob-emacs-lisp and ob-clojure now only wrap bodies in `let' forms when variables are present
2010-04-24 09:21:14 -06:00
Eric Schulte
bc0a6c624d
babel: adding :no-expand option to code blocks to inhibit body expansion
2010-04-24 09:08:27 -06:00
Eric Schulte
c12e18b6cf
babel: org-babel-reassemble-table checks for matching table/name dimensions
2010-04-23 11:54:31 -06:00
Dan Davison
b8c4bb27ba
babel: Use org-src edit buffer for expanded body preview
2010-04-23 10:10:01 -06:00
Eric Schulte
2f71d79e5e
org-babel-c: now using org-babel-read on outline-property parameters
2010-04-23 10:10:00 -06:00
Eric Schulte
9124e9055d
fixed bug in org-babel-execute:C
2010-04-23 10:10:00 -06:00
Eric Schulte
59251c8d08
babel: fixed bug in org-babel-execute:gnuplot related to body-expand changes
2010-04-23 10:10:00 -06:00
Dan Davison
d0dde7c6d5
babel: flip default values of :hlines header arg
2010-04-23 10:10:00 -06:00
Dan Davison
9fdd058669
org-babel-expand-body:R
2010-04-23 10:10:00 -06:00
Eric Schulte
32c7ae42c3
babel: remove superfluous newlines from tangled C code bodies
2010-04-23 10:10:00 -06:00
Eric Schulte
03f13106fb
babel: adding org-babel-expand-body:generic for languages w/o body expansion support
2010-04-23 10:10:00 -06:00
Eric Schulte
626cb079e4
babel: fixed bug in org-babel-expand-body:sass
2010-04-23 10:10:00 -06:00
Dan Davison
7decdec3b2
babel: erase previous contents of preview buffer
2010-04-23 10:10:00 -06:00
Dan Davison
8872454566
org-babel-expand-body:R
2010-04-23 10:10:00 -06:00
Eric Schulte
0917218da5
babel: fixed bug in org-babel-expand-body:python
2010-04-23 10:10:00 -06:00
Eric Schulte
9ff31a5110
babel: bound `org-babel-expand-src-block' to (C-c M-b p)
2010-04-23 10:09:59 -06:00
Eric Schulte
0734bf96ba
org-babel-expand-body:sql
2010-04-23 10:09:59 -06:00
Eric Schulte
1fdc012e3d
org-babel-expand-body:sh
2010-04-23 10:09:59 -06:00
Eric Schulte
e6c979f0d7
org-babel-expand-body:screen
2010-04-23 10:09:59 -06:00
Eric Schulte
35434e1389
org-babel-expand-body:sass
2010-04-23 10:09:59 -06:00
Eric Schulte
394031eb38
org-babel-expand-body:ruby
2010-04-23 10:09:59 -06:00
Eric Schulte
1bcafa5d9f
org-babel-expand-body:python
2010-04-23 10:09:59 -06:00
Eric Schulte
598dc1ad67
org-babel-expand-body:perl
2010-04-23 10:09:59 -06:00
Eric Schulte
41663b0ce4
org-babel-expand-body:oz
2010-04-23 10:09:59 -06:00
Eric Schulte
2759b6621d
org-babel-expand-body:octave
2010-04-23 10:09:59 -06:00
Eric Schulte
8e9f4eec88
org-babel-expand-body:ocaml
2010-04-23 10:09:58 -06:00
Eric Schulte
e07aced178
org-babel-expand-body:matlab
2010-04-23 10:09:58 -06:00
Eric Schulte
7bd0712ac2
org-babel-expand-body:latex
2010-04-23 10:09:58 -06:00
Eric Schulte
dd500005ef
org-babel-expand-body:haskell
2010-04-23 10:09:58 -06:00
Eric Schulte
58c8ddd5c6
org-babel-expand-body:gnuplot
2010-04-23 10:09:58 -06:00
Eric Schulte
01918dffc4
org-babel-expand-body:dot
2010-04-23 10:09:58 -06:00
Eric Schulte
4d862912b2
org-babel-expand-body:ditaa
2010-04-23 10:09:58 -06:00
Eric Schulte
b805089eb8
org-babel-expand-body:css
2010-04-23 10:09:58 -06:00
Eric Schulte
6d61edd1ea
org-babel-expand-body:clojure
2010-04-23 10:09:58 -06:00
Eric Schulte
4ba08f9b5b
org-babel-expand-body:asymptote
2010-04-23 10:09:58 -06:00
Eric Schulte
34eed9b48d
org-babel-expand-body:c, org-babel-expand-body:c++
2010-04-23 10:09:58 -06:00
Eric Schulte
8c8c96972e
org-babel-expand-body:emacs-lisp
2010-04-23 10:09:58 -06:00
Eric Schulte
2fe12b99f4
babel: adding new function `org-babel-expand-src-block'
...
org-babel-expand-body:lang function needs to be implemented by every
language, and is used to expand the body of a code block for
execution or tangling
2010-04-23 10:09:57 -06:00
Dan Davison
788779e16c
babel: typo in org-babel-get-rownames
2010-04-23 10:09:57 -06:00
Dan Davison
c777e729fb
babel: bring R row- and col-names into line with others
2010-04-23 10:09:57 -06:00
Julien Barnier
bd3c85ed60
babel: add :rownames header arg for R
2010-04-23 10:09:57 -06:00
Dan Davison
d5dd160b23
babel: bug fix in org-babel-get-colnames
2010-04-23 10:09:57 -06:00
Eric Schulte
b9aa92ba21
org-babel: splitting `org-babel-pick-name' into it's own function
...
also renaming org-babel-manicure-tables to org-babel-disassemble-tables
2010-04-23 10:09:57 -06:00
Eric Schulte
bfc93ca808
babel: added row/col-name support to all applicable languages
2010-04-23 10:09:57 -06:00
Eric Schulte
10b3da72fc
babel: adding row/col-names functions
...
adding a suite of functions to org-babel.el which can be used to
handle hlines, rownames, and columnnames in input tables. These
functions can be called from any org-babel-language.el file.
done in close collaboration with Dan Davison
2010-04-23 10:09:57 -06:00
Eric Schulte
0c8b86e9a9
org-babel: keep within 80 columns
...
this is exclusively whitespace and indentation changes, with the
goal of cleaning up the file, and keep all lines within 80 columns
2010-04-23 10:09:57 -06:00
Eric Schulte
927ff1125b
babel: `org-babel-ref-index-list' now converts trivial lists to scalars
...
Thanks to Darlan Cavalcante Moreira for this suggestion.
2010-04-21 09:35:13 -06:00
Carsten Dominik
c6ea2a1457
Use overlay-in and overlay-at instead of compatibility functions
2010-04-20 12:17:06 +02:00
Carsten Dominik
97e20048b2
Use `add-to-invisibility-spec' directly
2010-04-18 19:41:05 +02:00
Carsten Dominik
b35b9914e6
Revert "Use `add-to-invisibility-spec' directly"
...
This reverts commit c2e5b13a2d
.
2010-04-18 19:38:10 +02:00
Carsten Dominik
c2e5b13a2d
Use `add-to-invisibility-spec' directly
2010-04-18 19:26:30 +02:00
Carsten Dominik
bb0ef787b7
Require calendar already on top level in org.el
2010-04-18 16:50:13 +02:00
Carsten Dominik
f45e6a28b1
Use the normal overlay API, not Org's one
2010-04-18 16:49:58 +02:00
Eric Schulte
3652689944
org-mime: removed short string " xx " from semi syntax
2010-04-16 09:21:36 -06:00
Eric Schulte
3b5c85fb95
org-mime: WL is now fully supported -- thanks to Eric S. Fraga
2010-04-15 09:40:03 -06:00
Eric Schulte
a2769bef61
org-mime: bug fixes, thanks to Eric S Fraga and Andrew Hyatt for their debugging help
2010-04-14 09:12:41 -06:00
Eric Schulte
b617a457ae
org-mime: change `org-mime-org-export' to more closely mimic `org-run-like-in-org-mode'
2010-04-12 11:21:59 -06:00
Eric Schulte
70ba21e699
babel: new function `org-babel-tangle-publish' allows for tangling during project publish
2010-04-11 23:58:44 -06:00
Eric Schulte
7cbb35920d
org-babel-c: new header argument ":main no" allows inhibiting main wrap
2010-04-10 15:54:40 -06:00
Eric Schulte
99a07f1d4a
org-babel-c: cleaning up header arguments
2010-04-10 15:43:31 -06:00
Eric Schulte
0e8c9f7a49
org-babel: no longer over evaluating header arguments
2010-04-10 15:43:19 -06:00
Eric Schulte
3386a702f8
org-babel: all languages now returning lists as pure emacs-lisp, not quoted emacs-lisp
2010-04-10 15:15:06 -06:00
Eric Schulte
722dd7eb5c
org-mime: cleaned `org-mime-default-header' from text/plain exports
2010-04-10 15:15:05 -06:00
Dan Davison
59d499ff51
babel: Allow table to end neatly with terminal hline
...
Prior to this, a terminal hline would leave dangling empty cells:
#+TBLNAME: A
|---+---+---|
| a | b | c |
|---+---+---|
#+begin_src emacs-lisp :var tab=A
tab
#+end_src
#+results:
|---+---+---|
| a | b | c |
|---+---+---|
| | | |
2010-04-10 16:49:40 -04:00
Dan Davison
8c827ba5ba
babel: Allow output tables to start with 'hline
2010-04-10 16:12:28 -04:00
Eric Schulte
98b4ae28a9
babel: allow lisp quoted expansion of variable values when starting with `
2010-04-09 19:06:07 -06:00
Eric Schulte
8258daf439
added org-mime.el to contrib -- allows HTML email composition with Org-mode
...
see http://orgmode.org/worg/org-contrib/org-mime.php for
documentation
much thanks to everyone on the "using orgmode to send html mail"
thread (see http://thread.gmane.org/gmane.emacs.orgmode/23153 )
especially David Maus for ideas, discussion, and suggestions
2010-04-09 10:26:57 -06:00
Dan Davison
f846663ce6
babel: Do not add indentation to perl code.
...
Thanks to Łukasz Stelmach.
2010-04-09 08:45:18 -04:00
Dan Davison
0f83b2d203
babel: allow disabling of noweb expansion during tangling
2010-04-08 16:14:28 -04:00
Dan Davison
38d6bf3f6c
babel: allow assigning of variables when preparing R session
...
This is already in place for other languages, but seems to have been
forgotten for R.
2010-04-08 15:26:08 -04:00
Eric Schulte
caaf755192
babel: org-babel-latex adjusts to the new org latex setup
2010-04-07 22:43:37 -06:00
Dan Davison
e48b8bf577
babel: return string results from matlab as strings
...
Thanks to Bob Jansen
2010-04-07 18:44:58 -04:00
Dan Davison
f03c981fc0
babel: return string results from octave as strings
...
Thanks to Darlan Cavalcante
2010-04-07 15:51:04 -04:00
Eric Schulte
8d405783cb
babel: safer modification of `call-process-region'
2010-04-04 17:15:12 -06:00
Eric Schulte
8ef104195f
babel: use wildcard "*" characters in `org-babel-ref-index-list' to index entire ranges
2010-04-02 08:46:13 -06:00
Dan Davison
40a8933ba6
babel: allow R to produce svg format output
2010-04-01 18:45:59 -04:00
Carsten Dominik
c1ee3cc3d9
Merge branch 'master' of git+ssh://repo.or.cz/srv/git/org-mode
2010-03-31 00:16:13 +02:00
Carsten Dominik
28b1059f09
Snow Leopard compatibility for org-mac-iCal.el
2010-03-31 00:16:07 +02:00
Dan Davison
3637efe647
babel: Don't use language major-mode when expanding noweb references
...
There is no longer any need for the language major mode.
2010-03-30 10:20:18 -04:00
Dan Davison
e32c066874
babel: check that language major-mode is available during tangling
2010-03-30 10:20:10 -04:00
Eric Schulte
2675848d37
babel: org-babel-c now responds to :cmdline header argument
2010-03-29 12:26:53 -06:00
Bernt Hansen
f2abb650fb
Add completions for checkbox targets
...
Add the new property values to the completion list.
2010-03-28 22:10:24 -04:00
Eric Schulte
e8a125bed7
babel: now taking headline properties into account for lob calls
2010-03-28 16:53:00 -06:00
Dan Davison
a23ca4529f
babel: Get rid of parameter inheritance by reference blocks
2010-03-27 18:49:00 -04:00
Dan Davison
36351d26a9
Merge branch 'master' of git://repo.or.cz/org-mode
2010-03-27 16:18:27 -04:00
Dan Davison
47571965d4
babel: don't process emacs-lisp params twice
2010-03-27 15:59:53 -04:00
Eric Schulte
8ecc86d49e
babel: better variable initialization for org-babel-c
2010-03-27 08:20:38 -06:00
Eric Schulte
fc28dd538b
babel: shorter language names no longer shadow larger names
...
Previously "R" could overshadow "Ruby", and "C" could overshadow
"Clojure", causing blocks of the longer language name to fail to
load. This issue has now been fixed
2010-03-26 20:54:16 -06:00
Eric Schulte
22e4cd9b6d
babel: org-babel-c more robust, better error messages and c++ support
2010-03-26 19:35:31 -06:00
Eric Schulte
b61019489c
babel: org-babel-C now displays compilation error messages
2010-03-26 17:12:43 -06:00
Eric Schulte
e3fbc98b26
babel: removed errant reference to R from org-babel.el
2010-03-26 16:28:25 -06:00
Eric Schulte
17790c7dad
babel: limited initial support for C and similar languages
2010-03-26 16:28:23 -06:00
Eric Schulte
f400632f94
babel: when passing values from a table an extra '$' prefix forces literal
...
thanks to Maurizio Vitale for the suggestion. This allows literal
values to be passed to code blocks through `sbe' without forcing the
use of quotes inside the table.
2010-03-25 11:09:38 -06:00
Eric Schulte
727aa263cb
babel: src block regexps are more robust to embedded "[begin|end]_src" in block body
2010-03-22 15:19:33 -06:00
Eric Schulte
32bbd3f3bb
babel: variable references which look like lisp forms are now evaluated
...
for example, the following simple example
#+begin_src emacs-lisp :var two=(+ 1 1)
(sqrt two)
#+end_src
#+results:
: 1.4142135623730951
Or this more interesting usage, which pulls variable values from
headline properties
*** example headline w/property
:PROPERTIES:
:special: 89
:last-name: schulte
:END:
#+begin_src emacs-lisp :var special=(string-to-number (org-entry-get nil "special" t))
(+ special 1)
#+end_src
#+results:
: 90
#+begin_src emacs-lisp :var last-name=(org-entry-get nil "last-name" t))
(message "hello %s" last-name)
#+end_src
#+results:
: hello schulte
2010-03-22 15:19:32 -06:00
Dan Davison
abf0a50d1b
babel: Ensure that inline code blocks produce string output on export
2010-03-19 10:08:16 -04:00
Dan Davison
adb2f3f590
babel: Add octave and matlab support
2010-03-18 14:45:39 -04:00
Dan Davison
aa0e4b86ce
babel: Fix org-babel-load-file
...
This was broken by 29a2ab0047
2010-03-18 14:30:54 -04:00
Dan Davison
73d8e57685
babel: Allow tramp syntax when supplying :tangle filename
...
Patch by Rémi Vanicat.
2010-03-17 21:03:21 -04:00
Dan Davison
29a2ab0047
babel: when tangling do not add extension if filename supplied
2010-03-17 20:09:06 -04:00
Dan Davison
6976d9fc79
babel: org-babel-switch-to-session [C-c M-b z]
...
org-babel-pop-to-session is an alias of this
2010-03-16 12:57:28 -04:00
Dan Davison
485781ed40
babel: set default-directory in org-babel-pop-to-session
2010-03-13 14:02:47 -05:00
Dan Davison
f4ae431706
babel: Make code block params available when initiating session
2010-03-13 14:02:31 -05:00
Dan Davison
215d11c092
babel: New hook org-babel-after-execute-hook
...
Runs at the end of org-babel-execute-src-block
2010-03-13 14:02:22 -05:00
Dan Davison
ba4d698fa1
babel: Provide notification of errors during code execution
...
This deals with external process :results value mode for R, ruby,
python, perl and clojure: if the shell process has a non-zero exit
code, a buffer containing stderr is displayed.
2010-03-05 11:32:18 +00:00
Dan Davison
4e9a2d4efd
babel: Fix bug in shell-command-on-region
...
Prior to this commit,
OUTPUT-BUFFER nil
REPLACE 'replace
ERROR-BUFFER 'current-buffer
resulted in stdout going with stderr to the current buffer, contra the
docstring. With this change stdout is discarded in this case. The
docstring does stipulate that stdout always should go to *Shell
Command Output*; this change does not make that happen in this case.
2010-03-05 11:32:11 +00:00
Dan Davison
05986e95ea
babel: Introduce org-babel copy of shell-command-on-region
...
At this commit, org-babel-shell-command-on-region is a direct copy of
shell-command-on-region. In addition to switching to use the org-babel
version, we change the argument passed so that they agree with the
docstring of s-c-o-r.
Despite the change in arguments, the same behaviour results because
s-c-o-r does not behave as documented in emacs23. Future commits will
be able to fix these bugs in the org-babel version, as necessary.
2010-03-05 11:32:04 +00:00
Dan Davison
ed7b8bfcca
babel: clojure: read results remotely when necessary
2010-03-03 22:00:08 +00:00
Dan Davison
54c7b04734
babel: clojure: use shell-command-on-region
2010-03-03 21:59:32 +00:00
Dan Davison
a8c1a49b77
babel: Read perl results remotely when necessary.
2010-03-03 16:11:04 +00:00
Dan Davison
9c36b20a25
babel: make output file links track changed directory
2010-03-02 14:51:01 +00:00
Dan Davison
486bc2fe64
babel: Use file-name-as-directory to form default-directory
2010-03-02 14:51:01 +00:00
Eric Schulte
f0f511916a
babel: org-babel-oz.el now uses unix-style newline characters
2010-03-01 08:31:05 -07:00
Dan Davison
44c8487e2d
babel: fix bug with remote working directory
...
This change fixes a bug in the remote execution branch, involving the
way that org-babel-tramp-handle-call-process-region is used
to (conditionally) handle calls to call-process-region. When
org-babel-execute-src-block called itself recursively (e.g. when
resolving a reference to another src block), a circular binding of
symbols and values resulted.
2010-02-27 18:19:18 -05:00
Dan Davison
322fe431c5
babel: Write R input data remotely when necessary.
2010-02-27 18:19:09 -05:00
Eric Schulte
a705bf5925
babel: wrapped `org-babel-make-remote-file-name' in conditional as `org-babel-maybe-remote-file'
2010-02-27 18:18:37 -05:00
Dan Davison
24cdeea122
babel: read remote results from remote files
...
When using ':results value' in certain situations, results are written
to file by the foreign language process and subsequently read from
file by emacs into an elisp table structure. If the foreign language
process is running remotely, then the results are written
remotely. These changes ensure that in that case, an appropriate
remote file name is constructed to read the remote data.
2010-02-27 14:14:08 -05:00
Dan Davison
2056d7d419
babel: Allow shell-command-on-region to execute remotely
...
These changes solve two problems: both are discussed in the following thread
http://lists.gnu.org/archive/html/tramp-devel/2010-02/msg00025.html
of which a summary follows.
Firstly, shell-command-on-region does not work with tramp in the same
way that shell-command does. I.e. whereas
(let ((default-directory "/user@remote-host:"))
(shell-command "hostname" t))
gives the remote hostname,
(let ((default-directory "/user@remote-host:"))
(shell-command-on-region (point) (mark) "hostname" t))
does not.
The reason is that shell-command-on-region calls call-process-region,
which does not use a tramp handler for remote files. However, such a
file handler does exist (unused) in the tramp sources:
tramp-handle-call-process-region. There is a slight problem in that
there is a bug in that function definition in current tramp (which has
persisted because the function is not normally used).
Therefore, we define an org-babel version of
tramp-handle-call-process-region which fixes the bug, and we bind
call-process-region to org-babel-tramp-handle-call-process-region for
the duration of org-babel-execute-src-block.
2010-02-27 14:14:08 -05:00
Dan Davison
b3d5a1eb39
babel: working directories and remote execution
...
This introduces a new header argument :dir. For the duration of source
block execution, default-directory is set to the value of this header
argument. Consequences include:
- external interpreter processes run in that directory
- new session processes run in that directory (but existing ones are unaffected)
- relative paths for file output are relative to that directory
The name of a directory on a remote machine may be specified with
tramp syntax (/user@host:path), in which case the interpreter
executable will be sought in tramp-remote-path, and if found will
execute on the remote machine in the specified remote directory.
2010-02-27 14:14:08 -05:00
Dan Davison
5f8a57ad48
babel: change implementation of external R process evaluation
...
Use shell-command-on-region, bringing R into line with ruby, python,
clojure, shell. In addition to consistency (and perhaps efficiency),
this will also be preferable in the case of a remote R process because
it means that transfer of the input to the remote process is dealt
with automatically by tramp.
2010-02-27 14:14:08 -05:00
Eric Schulte
522f30bc9f
babel: tiny doc tweak
2010-02-27 14:14:07 -05:00
Dan Davison
cc7052540b
babel: allow point to move to end of comint buffer
2010-02-27 14:14:07 -05:00
Dan Davison
283ebcb43b
babel: New const variable org-babel-header-arg-names
...
This is used when checking for babel header args in org properties.
2010-02-27 14:14:07 -05:00
Dan Davison
82d7585810
babel: Tighten result and source line regexps
...
Anchored to beginning of line, with optional whitespace indenting.
2010-02-25 17:58:46 -05:00
Dan Davison
5833fbd358
babel: Make colnames header arg expect use "yes" for true.
2010-02-25 17:58:46 -05:00
Dan Davison
4064c31fa7
babel: get rid of unused variable
2010-02-25 17:58:46 -05:00
Dan Davison
fc693eb5e2
babel: treat python tuples as lists
2010-02-25 17:58:45 -05:00
Dan Davison
a95c05773e
babel: Fix unquoting of strings
...
Before this change we have
#+begin_src ruby :results value :session
["1", "3"]
#+end_src
#+results:
: 1", "3
After, we have
#+begin_src ruby :results value :session
["1", "3"]
#+end_src
#+results:
| 1 | 3 |
2010-02-25 17:58:45 -05:00
Dan Davison
6f62066ac6
babel: Fix export bug.
...
Introduced at 747f425f00
2010-02-25 15:12:47 -05:00
Dan Davison
eb521ae95e
Remove org-R from contrib
...
org-babel should be used to execute R code from org-mode.
2010-02-24 12:42:48 -05:00
Eric Schulte
8625e5c0bc
babel: gnuplot can now return it's string output -- when session is set to "none"
2010-02-23 08:16:25 -07:00
Dan Davison
a2d94ffc8e
babel: prevent quoting of strings in shell variables
2010-02-23 07:31:43 -07:00
Carsten Dominik
6a5f6deaac
Fix bug in org-git-link.el.
...
Patch by David Maus
2010-02-20 20:34:39 +01:00
Eric Schulte
753d1402d8
babel: avoid infinite loop in org-babel-execute-buffer -- Thanks to Stephan Schmitt
2010-02-16 13:34:09 -07:00
Eric Schulte
574f1b590e
babel: adding support for the OZ programming language -- Thanks to Torsten Anders!
...
For information on the OZ programming language see
http://www.mozart-oz.org/ , for information on using Org-babel with
OZ see the OZ specific documentation on Worg at
http://orgmode.org/worg/org-contrib/babel/languages/org-babel-doc-oz.php
2010-02-16 13:28:08 -07:00
Dan Davison
1e96482389
babel: check pdf file existence before deleting
2010-02-15 10:29:56 -07:00
Dan Davison
747f425f00
babel: only add srcname property for source blocks which actually have names
2010-02-15 10:07:23 -07:00
Eric Schulte
692c569215
babel: smarter `org-babel-ref-split-args' -- fixes bug parsing indexed function-style args
2010-02-14 11:48:28 -07:00
Eric Schulte
25f76ffa44
babel: now including source code block arguments w/source name on export
...
This change provides for better export of named source-code blocks,
with specific support for more attractive html export. The arguments
are included with the source code name, and both the source code name
and code body are wrapped in a div to support styling with css. For
example the following CSS can be used to associate a source-code block
name with it's code body, and to slightly indent the body.
.org-src-container {
border-left: 4px solid gray;
padding: 0.5em 0.5em 0.5em 1em; }
.org-src-container pre {
margin-left: 1em; }
2010-02-10 13:34:00 -07:00
Carsten Dominik
9196dc9bbe
Fix list export in org-export-generic
...
Patch by Robert Goldman
2010-02-10 11:36:58 +01:00
Eric Schulte
2531d704c0
babel: now able to reference links as results
2010-02-09 20:30:28 -07:00
Eric Schulte
db1fe2a619
babel: greatly simplified block exportation
2010-02-09 19:09:19 -07:00
Eric Schulte
df418de954
babel-clojure: slight change allowing strings to be passed in as variables
2010-02-08 13:17:37 -07:00
Eric Schulte
2829f77e2b
babel: org-babel-load-file no longer fails when `file-truename' returns nil
2010-02-08 13:17:06 -07:00
Eric Schulte
b59ebe6ec2
babel: org-babel-load-file will no longer strip portions of file names which appear to be extensions
2010-02-07 11:42:55 -07:00
Eric Schulte
a60a83fbb6
babel: better handling of table in shell scripts
2010-02-07 10:17:20 -07:00
Eric Schulte
047ac8ab1b
babel: shell command used by org-babel-sh is now configurable using the org-babel-sh-command variable
2010-02-07 09:36:56 -07:00
Eric Schulte
e4bc599745
org-babel-latex: allow pdf/png generation directly from latex source blocks
2010-02-06 09:54:10 -07:00
Eric Schulte
3ce4962447
babel: added :shebang and :comments header arguments for finer control over tangled output
2010-02-05 19:04:50 -07:00
Eric Schulte
131441dbd2
babel: load-file works for symlinks -- Thanks to Martin Kühl
2010-02-04 09:43:11 -07:00
Carsten Dominik
fd6cc29909
Make org-export-generic.el provide org-export-generic
...
This is in addition to providing org-generic.
2010-02-04 07:33:27 +01:00
Christian Egli
04c86c50c7
Add more documentation and handle non-standard diary-file location
2010-02-01 10:37:19 +01:00
Carsten Dominik
9321460f3e
Make org-exp-bibtex.el require org and org-exp
2010-01-31 17:53:28 +01:00
Dan Davison
21849af58b
babel: can now tangle files without extensions
2010-01-28 09:58:52 -07:00
Carsten Dominik
a2cf93f5d6
Merge branch 'master' of git+ssh://repo.or.cz/srv/git/org-mode
2010-01-26 10:50:11 +01:00
Eric Schulte
b59a57e890
babel: bug fix related to "no longer overwriting non-babel src blocks" commit
...
this fixes a bug introduced in commit
d154f27947
2010-01-25 23:54:03 -07:00
Carsten Dominik
2e53d9b137
Remove comma after means in many docstrings
...
Stephen Eglen says these commas should not be there.
2010-01-21 16:15:40 +01:00
Carsten Dominik
3ddd5ac49c
Add org-secretary.el by Juan Reyero
2010-01-20 10:15:50 +01:00
Eric Schulte
d154f27947
babel: no longer overwriting non-babel src blocks org-exp-blocks: adding progress-marker local variable
...
the progress-marker local variable set inside of a let in
org-exp-blocks is used to constrain searches in org-babel-exp to
ensure that a babel block doesn't overwrite non-babel src blocks
2010-01-18 13:36:27 -07:00
Eric Schulte
aa72dfc54f
babel: implement org-babel-load-session:* for R, clojure, gnuplot, python, ruby and sh
2010-01-11 10:14:30 -07:00
Eric Schulte
1e8107faf7
babel: improve doc strings for org-babel-execute-buffer and org-babel-execute-subtree
2010-01-11 08:47:29 -07:00
Joel Boehland
baa98c1f14
Added support to name the slime-output-buffer (slime-repl) to the name of the respective org-babel session
...
Signed-off-by: Joel Boehland <joel.boehland@evocomputing.com>
2010-01-09 14:25:18 -07:00
Eric Schulte
682d7a3193
babel: fixed bug where :exports was forced to "results" whenever :file was set
2010-01-09 12:44:02 -07:00
Carsten Dominik
588a42d4fd
org-exp-generic.el: Fix bug with closing bodies
...
Reported by Christian Lasarczyk, patch by Wes Hardaker
2010-01-08 17:34:44 +01:00
Joel Boehland
7121a5e9c8
babel: add session support for clojure
2010-01-06 17:38:35 -07:00
Eric Schulte
cd587c7148
babel: now exports source code block names
...
When exporting to html the source-code block name will be included
as a <label> immediately preceding the exported code. This <label>
is decorated with the 'org-src-name' css class.
When exporting to LaTeX with the listings package the source-code
block name will be included as a listings \title for the code
block. Currently the name will not be exported when the listings
package is not in use.
2010-01-05 08:33:08 -07:00
Carsten Dominik
ca5396e063
Fix bug in org-export-generic.el
2010-01-03 14:14:31 +01:00
Eric Schulte
0d82a1f2bc
babel: fixed type in org-babel-keys
2010-01-01 15:55:11 -07:00
Eric Schulte
da03a848e5
babel: now correctly combining nested tangle header arguments
2009-12-30 17:37:03 -07:00
Eric Schulte
2a2a76c2a3
babel: typo
2009-12-30 17:05:05 -07:00
Eric Schulte
e9acf4276e
babel: adding keys bindings for org-babel functions in org-babel-keys.el
2009-12-30 16:15:55 -07:00
Eric Schulte
80d41a9121
babel: inheriting properties from higher levels, tracking more properties
2009-12-28 18:04:25 -07:00
Eric Schulte
126f7a3582
org-babel: :cache header argument now uses standard "yes" "no" arguments
2009-12-22 10:11:23 -07:00
Eric Schulte
4815da4b16
org-babel: noweb references are not activated by default
2009-12-18 13:35:30 -07:00
Eric Schulte
0ec408cd9a
org-babel: no quotes around strings in table output -- Thanks to Francesco Pizzolante
2009-12-18 11:10:03 -07:00
Eric Schulte
904a37a850
babel: noweb insertions are now placed behind the line prefix of the <<>> reference
...
So, for example since the following <<example>> noweb reference
appears behind the SQL comment syntax the entire inserted body will
also be SQL commented
-- <<example>>
expands to
-- this is the
-- multi-line body of example
Note that noweb replacement text which does *not* contain any
newlines will not be affected by this change, so it is still
possible to use inline noweb references.
Thanks to Sébastien Vauban for this idea.
2009-12-17 11:22:00 -07:00