I started from the 78ec8e commit then cherry-picked and squashed
commits that have been done in master since then, except the bad
commits that overwrote the tree (in master) with the tree in maint.
This commit also bumps the version number to 7.8.06.
The only "fix" that was made between 78ec8e and the previous commit
is e0072f which has been reported to break stuff.
This fixes a wrong merge that should not have happened:
commit 7e903a merges the master branch into the maint branch,
while we really want to keep the maint branch a bugfix-only
branch.
This commit reverts back the maint branch to its state before
merging the master branch. From there, we will fix remaining
problems with the maint branch (e.g. copyright issues) then
release this maint branch as Org-mode 7.8.05.
* lisp/ob.el (org-babel-merge-params): Add "eval" as acceptable noweb
argument.
(org-babel-noweb-p): The "eval" argument only expands during
evaluation.
* lisp/ob-tangle.el (org-babel-tangle): Don't prompt for a file name
if :tangle is specified.
* lisp/ob.el (org-babel-expand-noweb-references): Widen buffer when
expanding noweb references.
> attached is a patch that enhances org-babel-goto-named-src-block (bound
> to C-c C-v g by default). Included are two enhancements:
>
> 1. the point is pushed to the org-mark-ring, such that returning with
> C-c & becomes possible
> 2. the target src block is guessed from
> a) noweb-reference
> b) #+call:
> c) #+results:
> d) symbol-at-point
> if one of these is found (in that order)
* lisp/ob.el (org-babel-goto-named-src-block): Pushing the point to
the org-mark-ring and guessing at the code block name to jump to.
* lisp/ob.el:
Fix `org-babel-result-end' command to provide consistent result
removal where result is type `wrap'. Prior to this fix
multiple (org-ctrl-c-ctrl-c) commands will add multiple newlines to
the end of results (one newline per block execution).
This fixes the test `test-ob/org-babel-remove-result--results-wrap'
* testing/lisp/test-ob.el:
Uncomment test since it now passes.
Conflicts:
testing/lisp/test-ob.el
* lisp/ob.el (org-babel-strip-protective-commas): Use
`org-strip-protective-commas'.
* lisp/org-exp.el (org-export-select-backend-specific-text): Use
`org-strip-protective-commas'.
* lisp/org-src.el (org-edit-src-code): Use
`org-strip-protective-commas'.
* lisp/org.el (org-strip-protective-commas): Single definition for
this functionality.
This makes it easier to keep consistent behavior.
* lisp/ob-tangle.el (org-babel-tangle-clean): Just use default value.
* lisp/ob.el (org-babel-noweb-wrap): Add default value.
(org-babel-expand-noweb-references): Just use default value.
Thanks to Sean O'Halpin for suggesting this change.
* lisp/ob-tangle.el (org-babel-tangle-clean): Use the customizable
noweb wrappers.
* lisp/ob.el (org-babel-noweb-wrap-start): Begin a noweb reference.
(org-babel-noweb-wrap-end): End a noweb reference.
(org-babel-noweb-wrap): Apply the customizable noweb wrappers.
(org-babel-expand-noweb-references): Use the customizable noweb
wrappers.
* lisp/ob.el:
Fix `org-babel-result-end' command to provide consistent result
removal where result is type `wrap'. Prior to this fix
multiple (org-ctrl-c-ctrl-c) commands will add multiple newlines to
the end of results (one newline per block execution).
This fixes the test `test-ob/org-babel-remove-result--results-wrap'
* testing/lisp/test-ob.el:
Uncomment test since it now passes.
* lisp/ob.el (org-babel-expand-noweb-references): Only allow
reference names which start and end with non-whitespace characters.
Also, raise errors as appropriate given org-babel-noweb-error-langs.
* doc/org.texi (noweb-sep): Document new header argument.
* lisp/ob.el (org-babel-common-header-args-w-values): Add new header
argument.
(org-babel-expand-noweb-references): Use header argument rather than
customization variable.
* lisp/ob.el (org-babel-noweb-separator): Custom variable for
accumulated noweb references.
(org-babel-expand-noweb-references): Allow separator for noweb
references.
* doc/org.texi (noweb-ref): Documentation of this new custom variable.
* lisp/ob.el (org-babel-map-src-blocks): Don't pollute symbol space.
(org-babel-map-inline-src-blocks): Don't pollute symbol space.
(org-babel-map-call-lines): Don't pollute symbol space.
(org-babel-map-executables): Map over *all* executable Org-mode
elements.
(org-babel-execute-buffer): Execute elements in buffer order instead
of arbitrarily.
* lisp/ob.el (org-babel-results-keyword): New user-configurable
results keyword.
(org-babel-where-is-src-block-result): Use new user-configurable
results keyword.
* lisp/ob-exp.el (org-babel-exp-src-block): Use `org-babel-noweb-p'.
(org-babel-exp-inline-src-blocks): Use `org-babel-noweb-p'.
* lisp/ob-tangle.el (org-babel-tangle-collect-blocks): Use
`org-babel-noweb-p'.
* lisp/ob.el (org-babel-execute-src-block): Use `org-babel-noweb-p'.
(org-babel-expand-src-block): Use `org-babel-noweb-p'.
(org-babel-load-in-session): Use `org-babel-noweb-p'.
(org-babel-merge-params): Use `org-babel-noweb-p'.
(org-babel-noweb-p): New function used to determine if noweb
expansion should be carried out in a given context.
* lisp/ob.el (org-babel-common-header-args-w-values): Add the new
header argument name.
(org-babel-insert-result): Respect the value of the :wrap header
argument when inserting results.
(org-babel-result-end): Find the end of arbitrarily named result
blocks.
Thanks to Martyn Jago for the test case
* lisp/ob.el (org-babel-balanced-split): Explicit checking if list
before calling member.
* testing/lisp/test-ob.el (test-ob/org-babel-balanced-split): Testing
the new Emacs22-proof behavior.
Thanks to Martyn Jago for the test case
* lisp/ob.el (org-babel-balanced-split): Explicit checking if list
before calling member.
* testing/lisp/test-ob.el (test-ob/org-babel-balanced-split): Testing
the new Emacs22-proof behavior.
* lisp/ob.el (org-babel-expand-noweb-references): Rather than using a
pure regexp solution to resolve noweb references, actually check the
information of every code block in the buffer. This will cause a
slowdown in noweb reference expansion, but is necessary for correct
behavior.
* lisp/ob.el (*org-babel-use-quick-and-dirty-noweb-expansion*):
Controls the method in which noweb references are expanded.
(org-babel-expand-noweb-references): Bring back the option for
regexp-based noweb expansion.
* lisp/ob.el (org-babel-expand-noweb-references): Rather than using a
pure regexp solution to resolve noweb references, actually check the
information of every code block in the buffer. This will cause a
slowdown in noweb reference expansion, but is necessary for correct
behavior.
* org.el (org-block-regexp)
(org-heading-keyword-regexp-format)
(org-heading-keyword-maybe-regexp-format): Move up to keep the
byte-compiler happy.
* org-special-blocks.el (org-html): Require 'org-html.
(org-open-par, org-close-par-maybe): Declare as functions.
* ob.el (org-reduce): Declare as a function.
(org-current-export-file): Declare.
* ob-ref.el (org-babel-update-intermediate): Make a defvar.
* lisp/ob.el (org-babel-expand-noweb-references): Fixed regexp.
* testing/lisp/test-ob.el (test-ob/noweb-expansion): Test both named
code block and noweb-ref header argument references.
Given that arbitrary regions may already be hidden using a drawer the
ability to hide any named entity is redundant. In addition the name
based hiding does not mix well with other keywords.
Thanks to Nicolas Goaziou for raising this issue and suggesting the
removal of #+name based hiding.
* lisp/ob.el (org-babel-expand-noweb-references): Rather than collect
the info from *every* block in the current buffer, simply regexp
search for those blocks which appear to match the continued source
name.
* lisp/ob.el (org-babel-insert-result): Do not examplize wrapped
scalar results, simply wrap them.
(org-babel-result-end): Find the end of results wrapped in a RESULTS
drawer.
* doc/org.texi (eval): Documenting the full range of :eval header
argument values.
* lisp/ob.el (org-babel-confirm-evaluate): Adding support for new
range of :eval header arguments.
* testing/lisp/test-ob.el (test-ob/eval-header-argument): Testing the
:eval header argument.
* doc/org.texi (eval): Documentation of the new :eval option.
* lisp/ob.el (org-babel-confirm-evaluate): Inhibit evaluation during
export when eval is set to "non-export".
* lisp/ob.el (org-babel-join-splits-near-ch): Rejoins a list of a
split string when a character appears on either side of the split.
(org-babel-parse-multiple-vars): Rejoin splits around "=" signs.
* lisp/ob.el (org-babel-named-src-block-regexp-for-name): Ensure that
partial names are not matched.
(org-babel-named-data-regexp-for-name): Ensure that partial names
are not matched.
* testing/lisp/test-ob.el (test-ob/do-not-resolve-to-partial-names-data):
Test to ensure that partial names are not matched.
* lisp/ob-ref.el (org-babel-ref-resolve): Search for named code blocks
before named data.
* lisp/ob.el (org-babel-named-data-regexp-for-name): New function for
finding named data.
* testing/lisp/test-ob.el (test-ob/resolve-code-blocks-before-data-blocks):
Test to ensure that named references are resolved in the correct
order.
* lisp/ob.el (org-babel-find-named-result): Downcase "name" before comparison.
* testing/lisp/test-ob.el (test-ob/does-not-replace-a-block-with-the-results):
Test that named code blocks are replaced with their results.
* lisp/ob-exp.el (org-babel-in-example-or-verbatim): Some valid
execution contexts (e.g., call lines) look like commented lines.
* lisp/ob.el (org-babel-get-src-block-info): Empty match string
doesn't count.
(org-babel-process-params): Always process parameters, even if you
don't to table splitting.
* testing/lisp/test-ob-C.el (ob-C/table): Ignore failures for this C
test.
* testing/lisp/test-ob-fortran.el (ob-fortran/input-var): Ignore
failures for this fortran test.
This results in the following behavior.
#+property: var foo=1
#+property: var+ bar=2
#+begin_src emacs-lisp
(+ foo bar)
#+end_src
#+results:
: 3
#+begin_src emacs-lisp
(org-entry-get (point) "var" t)
#+end_src
#+results:
: foo=1 bar=2
* overwriting a file-wide property
:PROPERTIES:
:var: foo=7
:END:
#+begin_src emacs-lisp
foo
#+end_src
#+results:
: 7
#+begin_src emacs-lisp
(org-entry-get (point) "var" t)
#+end_src
#+results:
: foo=7
* appending to a file-wide property
:PROPERTIES:
:var+: baz=3
:END:
#+begin_src emacs-lisp
(+ foo bar baz)
#+end_src
#+results:
: 6
#+begin_src emacs-lisp
(org-entry-get (point) "var" t)
#+end_src
#+results:
: foo=1 bar=2 baz=3
* lisp/org.el (org-update-property-plist): Updates a given property
list with a property name and a property value.
(org-set-regexps-and-options): Use org-update-property-plist.
(org-entry-get): Use org-update-property-plist.
* testing/examples/property-inheritance.org: Example file for testing
appending property behavior.
* testing/lisp/test-property-inheritance.el: Tests of appending
property behavior.
* lisp/ob.el (org-babel-balanced-split): Allow splitting on single
characters as well as groups of two characters.
(org-babel-parse-multiple-vars): Split variables on single spaces.
Nick Dokos <nicholas.dokos@hp.com> writes:
> Eric Schulte <schulte.eric@gmail.com> wrote:
>
>> The attached updated patch fixes a bug in the original.
>>
>
> Minor problem in applying:
>
> ,----
> | $ git apply ~/Mail/inbox/724
> | /home/nick/Mail/inbox/724:671: trailing whitespace.
> | #+name:
> | /home/nick/Mail/inbox/724:599: new blank line at EOF.
> | +
> | warning: 2 lines add whitespace errors.
> `----
The attached version fixes these issues, Thanks -- Eric
>From 0e43d59ee8d46a63f86780a502de726271bc39de Mon Sep 17 00:00:00 2001
From: Eric Schulte <schulte.eric@gmail.com>
Date: Fri, 28 Oct 2011 10:44:21 -0600
Subject: [PATCH] removing code block, results and call-line synonyms -- BREAKING CHANGE
Following a round of on-list discussion many code block synonyms have
been removed, moving forward the following syntax is valid.
- call lines are specified with #+call:
- code blocks are named with #+name:
- results are named with #+name:, however results generated by a code
block may still be labeled with #+results:, and tables named with
#+tblname: will be considered to be named results
The following function may be used to update an existing Org-mode
buffer to the new syntax.
(defun update-org-buffer ()
"Update an Org-mode buffer to the new data, code block and call line syntax."
(interactive)
(save-excursion
(flet ((to-re (lst) (concat "^[ \t]*#\\+" (regexp-opt lst t)
"\\(\\[\\([[:alnum:]]+\\)\\]\\)?\\:[ \t]*"))
(update (re new)
(goto-char (point-min))
(while (re-search-forward re nil t)
(replace-match new nil nil nil 1))))
(let ((old-re (to-re '("RESULTS" "DATA" "SRCNAME" "SOURCE")))
(lob-re (to-re '("LOB")))
(case-fold-search t))
(update old-re "name")
(update lob-re "call")))))
Note: If an old version of Org-mode (e.g., the one shipped with Emacs)
is installed on your system many of the important variables will
be pre-defined with a defvar and *will not* have their values
automatically updated, these include the following.
- org-babel-data-names
- org-babel-result-regexp
- org-babel-src-block-regexp
- org-babel-src-name-regexp
- org-babel-src-name-w-name-regexp
It may be necessary to either remove the source code of older
versions of Org-mode, or to explicitly evaluate the ob.el file.
* lisp/ob-exp.el (org-exp-res/src-name-cleanup): Updated
Documentation.
* lisp/ob-lob.el (org-babel-block-lob-one-liner-regexp): Updated
regular expression.
(org-babel-inline-lob-one-liner-regexp): Updated regular expression.
* lisp/ob-ref.el (org-babel-ref-resolve): Notice when something that
looks like a data results may actually be a code block.
* lisp/ob-table.el: Updated documentation.
* lisp/ob.el (org-babel-src-name-regexp): Simplified regexp.
(org-babel-get-src-block-info): Updated match strings.
(org-babel-data-names): Simplified acceptable names.
(org-babel-find-named-block): Indentation.
(org-babel-find-named-result): Updated to not return a code block as
a result.
* lisp/org.el (org-fontify-meta-lines-and-blocks-1): Removing
references to old syntactic elements.
(org-additional-option-like-keywords): Removing references to old
syntactic elements.
* contrib/babel/library-of-babel.org: Updated to make use of the new
syntax.
* testing/examples/babel-dangerous.org: Updated to make use of the new
syntax.
* testing/examples/babel.org: Updated to make use of the new syntax.
* testing/examples/ob-awk-test.org: Updated to make use of the new
syntax.
* testing/examples/ob-fortran-test.org: Updated to make use of the new
syntax.
* testing/lisp/test-ob.el: Removed two bad tests which tested the
literal values of old regular expressions rather than their
behavior.
* lisp/ob-lob.el (org-babel-map-call-lines): Allow mapping of code
over all call lines in a buffer.
* lisp/ob.el (org-babel-execute-buffer): Execute call lines when
executing an entire buffer.
* lisp/ob.el (org-babel-balanced-split): Balance both [] and ()
groupings.
(org-babel-parse-header-arguments): Be sure to replace removed ":"
characters.
* lisp/ob.el (org-babel-params-from-properties): Now splits multiple
var arguments behind a single ":var".
(org-babel-balanced-split): Separated balanced splitting of strings
out into a new function.
(org-babel-parse-multiple-vars): Splits multiple var arguments
behind a single ":var".
* lisp/ob.el (org-babel-params-from-buffer): Removing #+BABEL: lines
in favor of general #+PROPERTIES: lines.
* doc/org.texi (Buffer-wide header arguments): Removing documentation
of the defunct #+BABEL: structure.
Thanks to Nick Dokos for suggesting this fix
* lisp/ob.el (org-babel-disassemble-tables): Fix multi-table bug in
code block colname and rowname handling.
* lisp/ob.el (org-babel-common-header-args-w-values): New variable to
hold common header arguments and their default values.
(org-babel-header-arg-names): Redefined using the new common header
arg variable.
(org-babel-insert-header-arg): New function to help when inserting
header arguments.
* lisp/ob-exp.el (org-babel-exp-inline-src-blocks): Save match data
around `org-babel-exp-do-export' which now searches in this case.
(org-babel-exp-results): Position the point in the inline source
block during export evaluation.
* lisp/ob.el (org-babel-insert-result): More readable code.
Also remove blank lines before the ";;; org*el ends here" declarations.
Having a "Version" header forced us to update every file when releasing a
new version of Org; it also forced us to update every file when merging Org
with Emacs trunk, thus cluttering the diffs between the previously merged
version and the new one with useless information.
Glenn Morris suggested this in emacs-devel:
http://lists.gnu.org/archive/html/emacs-devel/2011-08/msg00322.html
* lisp/ob-keys.el (org-babel-key-bindings): Bound to C-c C-v k.
* lisp/ob.el (org-babel-map-regexp): New generic mapping macro.
(org-babel-map-inline-src-blocks): Rewritten to use new macro.
(org-babel-kill-results): Remove some or all results in the current
file.
* lisp/ob-lob.el (org-babel-map-call-lines): Map over all lob call
lines in the current file.
* doc/orgcard.tex: Document new keybinding.
* lisp/ob.el (org-babel-view-src-block-info): New function to inspect code blocks.
* lisp/ob-keys.el (org-babel-key-bindings): Key bindings for org-babel-view-src-block-info.
* doc/orgcard.tex: Documentation of new Babel function.
* lisp/ob-exp.el (org-babel-exp-results): Resolve hashes in the
current (not original) file buffer.
* lisp/ob.el (org-babel-current-result-hash): More informative name,
and remove useless optional argument.
* ob.el (org-babel-strip-protective-commas): Return `nil'
instead of an error if no argument is given.
(org-babel-parse-src-block-match): Make sure body is defined
in the let construct.
* lisp/ob-awk.el (org-babel-execute:awk): Use "verbatim" as synonym
for "scalar".
* lisp/ob-sh.el (org-babel-sh-evaluate): Use "verbatim" as synonym for
"scalar".
* lisp/ob-sqlite.el (org-babel-execute:sqlite): Use "verbatim" as
synonym for "scalar".
* lisp/ob.el (org-babel-merge-params): Use "verbatim" as synonym for
"scalar".
* lisp/ob.el (org-babel-sha1-hash): Adding optional argument KIND to
all org-called-interactively-p function invocations.
* lisp/org-agenda.el (org-agenda-redo): Adding optional argument KIND to
all org-called-interactively-p function invocations.
(org-agenda-show-1): Adding optional argument KIND to all
org-called-interactively-p function invocations.
(org-agenda-set-tags): Adding optional argument KIND to all
org-called-interactively-p function invocations.
* lisp/org-ascii.el (org-export-as-latin1): Adding optional argument
KIND to all org-called-interactively-p function invocations.
(org-export-as-latin1-to-buffer): Adding optional argument KIND to
all org-called-interactively-p function invocations.
(org-export-as-utf8-to-buffer): Adding optional argument KIND to all
org-called-interactively-p function invocations.
(org-export-region-as-ascii): Adding optional argument KIND to all
org-called-interactively-p function invocations.
* lisp/org-docbook.el (org-export-region-as-docbook): Adding optional
argument KIND to all org-called-interactively-p function
invocations.
* lisp/org-html.el (org-export-region-as-html): Adding optional
argument KIND to all org-called-interactively-p function
invocations.
* lisp/org-latex.el (org-export-region-as-latex): Adding optional
argument KIND to all org-called-interactively-p function
invocations.
* lisp/org-table.el (org-table-blank-field): Adding optional argument
KIND to all org-called-interactively-p function invocations.
(org-table-current-column): Adding optional argument KIND to all
org-called-interactively-p function invocations.
(org-table-current-dline): Adding optional argument KIND to all
org-called-interactively-p function invocations.
(org-table-sort-lines): Adding optional argument KIND to all
org-called-interactively-p function invocations.
(org-table-sum): Adding optional argument KIND to all
org-called-interactively-p function invocations.
(org-table-rotate-recalc-marks): Adding optional argument KIND to
all org-called-interactively-p function invocations.
(org-table-eval-formula): Adding optional argument KIND to all
org-called-interactively-p function invocations.
(orgtbl-send-table): Adding optional argument KIND to all
org-called-interactively-p function invocations.
* lisp/org.el (org-mode): Adding optional argument KIND to all
org-called-interactively-p function invocations.
(org-copy-subtree): Adding optional argument KIND to all
org-called-interactively-p function invocations.
(org-paste-subtree): Adding optional argument KIND to all
org-called-interactively-p function invocations.
(org-store-link): Adding optional argument KIND to all
org-called-interactively-p function invocations.
(org-todo): Adding optional argument KIND to all
org-called-interactively-p function invocations.
(org-occur): Adding optional argument KIND to all
org-called-interactively-p function invocations.
Interactive-p is an obsolete function as of Emacs 23.2.
`org-called-interactively-p' takes care of the current (x)Emacs
version and use either `interactive-p' (for XEmacs and Emacs<23.2)
or `called-interactively-p'.
* lisp/ob-ref.el (org-babel-ref-goto-headline-id): Split out into its
own function.
(org-babel-ref-headline-body): Split out into its own function.
(org-babel-ref-resolve): Using new functions, and alignment.
* lisp/ob.el (org-babel-ref-goto-headline-id): Declare function.
(org-babel-ref-headline-body): Declare function.
(org-babel-expand-noweb-references): Now expands noweb references to
headlines during expansion.
* lisp/ob.el (org-babel-merge-params): Ensure variable parameters are
not reversed.
* lisp/ob-ref.el (org-babel-ref-split-args): Ensure variable
parameters are not reversed.
Bastien Guerry
Eric Schulte
Andreas Leha
Martyn Jago
Bastien Guerry
Eric Schulte
Nicolas Goaziou
Achim Gratz
David Maus
emacs
Michael Markert