Commit Graph

31 Commits

Author SHA1 Message Date
Bastien 0e580d169f ob-J.el: Add a maintainer
* lisp/ob-J.el: Add a maintainer.
2020-09-05 08:06:01 +02:00
Joseph Novakovich 7d8247410d ob-J.el: Add ability to customize sit duration
* lisp/ob-J.el (org-babel-execute:J, org-babel-J-eval-string): Add
customizability.

(org-babel-execute:J): Lookup optional parameter `:sit' to allow one
to wait for a specified amount of time before grabbing the output of
the J subprocess.  Pass this specified value or the previous default
of .1 to `org-babel-J-eval-string'.
(org-babel-eval-string): Pass new argument `sit-time' to `sit-for'
before grabbing output.

The problem is that we read the contents of the output after 0.1
seconds, which, for expensive computations, results in the mangling of
output.  Output from expensive computations gets propagated down to
subsequent code-blocks' outputs, producing a horrible mess.

TINYCHANGE
2020-09-04 09:18:38 +02:00
Kyle Meyer ff5fc050d3 Update copyright year to 2020 2020-01-01 13:38:46 -05:00
Juanma Barranquero 97feee0469 Backport commit 114323226 from Emacs
* lisp/ob-C.el (org-babel-prep-session:C)
(org-babel-load-session:C):
* lisp/ob-J.el (org-babel-execute:J):
* lisp/ob-asymptote.el (org-babel-prep-session:asymptote):
* lisp/ob-awk.el (org-babel-execute:awk):
* lisp/ob-core.el (org-babel-process-file-name):
* lisp/ob-ebnf.el (org-babel-execute:ebnf):
* lisp/ob-forth.el (org-babel-execute:forth):
* lisp/ob-fortran.el (org-babel-execute:fortran)
(org-babel-prep-session:fortran, org-babel-load-session:fortran):
* lisp/ob-groovy.el (org-babel-execute:groovy):
* lisp/ob-io.el (org-babel-execute:io):
* lisp/ob-js.el (org-babel-execute:js):
* lisp/ob-lilypond.el (org-babel-default-header-args:lilypond)
(org-babel-lilypond-compile-post-tangle)
(org-babel-lilypond-display-pdf-post-tangle)
(org-babel-lilypond-tangle)
(org-babel-lilypond-execute-tangled-ly)
(org-babel-lilypond-compile-lilyfile)
(org-babel-lilypond-check-for-compile-error)
(org-babel-lilypond-process-compile-error)
(org-babel-lilypond-mark-error-line)
(org-babel-lilypond-parse-error-line)
(org-babel-lilypond-attempt-to-open-pdf)
(org-babel-lilypond-attempt-to-play-midi)
(org-babel-lilypond-switch-extension)
(org-babel-lilypond-set-header-args):
* lisp/ob-lua.el (org-babel-prep-session:lua):
* lisp/ob-picolisp.el (org-babel-execute:picolisp):
* lisp/ob-processing.el (org-babel-prep-session:processing):
* lisp/ob-python.el (org-babel-prep-session:python):
* lisp/ob-scheme.el (org-babel-scheme-capture-current-message)
(org-babel-scheme-execute-with-geiser, org-babel-execute:scheme):
* lisp/ob-shen.el (org-babel-execute:shen):
* lisp/org-agenda.el (org-agenda-entry-types)
(org-agenda-move-date-from-past-immediately-to-today)
(org-agenda-time-grid, org-agenda-sorting-strategy)
(org-agenda-filter-by-category, org-agenda-forward-block):
* lisp/org-faces.el (org-verbatim, org-cycle-level-faces):
* lisp/org-indent.el (org-indent-set-line-properties):
* lisp/org-macs.el (org-get-limited-outline-regexp):
* lisp/org-mobile.el (org-mobile-files):
* lisp/org.el (org-use-fast-todo-selection)
(org-extend-today-until, org-use-property-inheritance)
(org-refresh-effort-properties)
(org-track-ordered-property-with-tag, org-shiftright):
* lisp/ox-html.el (org-html-checkbox-type):
* lisp/ox-man.el (org-man-source-highlight)
(org-man-verse-block):
* lisp/ox-publish.el (org-publish-sitemap-default): Assorted
docfixes.

lisp/*.el: Fix typos and other trivial doc fixes
11432322650830fe9ae365f4113733a79226056d
Juanma Barranquero
Sat Sep 21 00:27:53 2019 +0200
2019-09-29 15:47:58 -04:00
Bastien f584d37a67 Update copyright year 2019-01-01 11:50:56 +01:00
Aaron Ecay 4afb7f747b Update declare-function calls for functions that have moved.
In cases where functions have moved from org.el into org-macs.el, it
is often possible to replace declare-function by (require 'org-macs)
2018-05-10 01:04:12 +01:00
Tim Landscheidt b289a65be7 Use https for links to orgmode.org
TINYCHANGE
2018-01-19 18:14:58 +01:00
Kyle Meyer 3e1641ef0a Update copyright years 2018-01-07 00:27:54 -05:00
Paul Eggert ff0dcf52a5 Backport commit bc511a64f from Emacs
Prefer HTTPS to FTP and HTTP in documentation
bc511a64f6da9ab51acc7c8865e80c4a4cb655c2
Paul Eggert
Wed Sep 13 15:54:37 2017 -0700
2017-09-17 00:28:38 -04:00
Paul Eggert b7fdc30388 Backport commit 20e9a00fb from Emacs
* lisp/org-table.el (org-table-sort-lines): Fix misspelling in prompt.
* lisp/ox-ascii.el (org-ascii--describe-datum): Fix misspelling in
call to org-element-lineage.

Spelling fixes
20e9a00fb5d12ad408f9dd15adcfcd205783c1b0
Paul Eggert
Thu Jul 6 00:24:56 2017 -0700
2017-07-09 11:27:12 -04:00
Kyle Meyer 7c710f6f57 Change :version in defcustoms from "25.2" to "26.1"
* lisp/ob-J.el (org-babel-J-command):
* lisp/ob-core.el (org-babel-hash-show-time):
* lisp/ob-exp.el (org-babel-exp-inline-code-template):
* lisp/ob-lisp.el (org-babel-lisp-eval-fn):
* lisp/org-agenda.el (org-agenda-view-columns-initially):
* lisp/org-attach.el (org-attach-commit):
(org-attach-archive-delete):
(org-attach-annex-auto-get):
* lisp/org-bibtex.el (org-bibtex-inherit-tags):
* lisp/org-clock.el (org-clock-into-drawer):
* lisp/org-colview.el (org-columns-summary-types):
* lisp/org-faces.el (org-block):
* lisp/org-src.el (org-src-block-faces):
* lisp/org-table.el (org-table-copy-increment):
(org-table-formula-create-columns):
(org-table-convert-region-max-lines):
* lisp/org-timer.el (org-timer-default-timer):
* lisp/org.el (org-export-backends):
(org-show-context-detail):
(org-cycle-hook):
(org-occur-case-fold-search):
(org-preview-latex-default-process):
(org-preview-latex-process-alist):
(org-preview-latex-image-directory):
(org-latex-default-packages-alist):
(org-sparse-tree-default-date-type):
(org-structure-template-alist):
(org-effort-durations):
(org-agenda-ignore-properties): Change :version from "25.2" to "26.1".
(customize-package-emacs-version-alist): Fix associations between Org
and Emacs releases.
* lisp/ox-ascii.el (org-ascii-list-margin):
* lisp/ox-beamer.el (org-beamer-subtitle-format):
* lisp/ox-html.el (org-html-format-headline-function):
(org-html-format-inlinetask-function):
(org-html-viewport):
* lisp/ox-latex.el (org-latex-caption-above):
(org-latex-prefer-user-labels):
(org-latex-subtitle-format):
(org-latex-hyperref-template):
(org-latex-footnote-defined-format):
(org-latex-images-centered):
(org-latex-default-figure-position):
(org-latex-text-markup-alist):
(org-latex-format-inlinetask-function):
(org-latex-custom-lang-environments):
(org-latex-compiler-file-string):
(org-latex-compiler):
(org-latex-bib-compiler):
(org-latex-logfiles-extensions):
(org-latex-known-warnings):
* lisp/ox-md.el (org-md-footnotes-section):
(org-md-footnote-format):
* lisp/ox-odt.el (org-odt-format-headline-function):
(org-odt-format-inlinetask-function):
(org-odt-inline-image-rules):
* lisp/ox-texinfo.el (org-texinfo-format-headline-function):
* lisp/ox.el (org-export-with-creator):
(org-export-with-title):
(org-export-with-broken-links):
(org-export-copy-to-kill-ring): Change :version from "25.2" to "26.1".

It looks like the goal is to sync Org 9.0.* (maint) with the Emacs
master branch (what will be version 26.1):
https://lists.gnu.org/archive/html/emacs-orgmode/2017-01/msg00558.html
2017-01-26 00:02:03 -05:00
Kyle Meyer 713f785017 Update copyright years 2017-01-05 20:19:37 -05:00
Aaron Ecay 79650ffbbd Use assq instead of assoc for :keywords
* lisp/ob-C.el (org-babel-C-execute):
* lisp/ob-J.el (org-babel-execute:J):
* lisp/ob-R.el (org-babel-edit-prep:R):
(org-babel-expand-body:R):
(org-babel-execute:R):
(org-babel-variable-assignments:R):
(org-babel-R-initiate-session):
* lisp/ob-abc.el (org-babel-execute:abc):
* lisp/ob-asymptote.el (org-babel-execute:asymptote):
* lisp/ob-awk.el (org-babel-execute:awk):
* lisp/ob-clojure.el (org-babel-expand-body:clojure):
(org-babel-execute:clojure):
* lisp/ob-core.el (org-babel-expand-body:generic):
(org-babel-load-in-session):
(org-babel-initiate-session):
(org-babel-open-src-block-result):
(org-babel-process-params):
(org-babel-insert-result):
(org-babel-expand-noweb-references):
* lisp/ob-ditaa.el (org-babel-execute:ditaa):
* lisp/ob-dot.el (org-babel-execute:dot):
* lisp/ob-ebnf.el (org-babel-execute:ebnf):
* lisp/ob-emacs-lisp.el (org-babel-expand-body:emacs-lisp):
(org-babel-execute:emacs-lisp):
* lisp/ob-exp.el (org-babel-exp-process-buffer):
(org-babel-exp-do-export):
(org-babel-exp-code):
* lisp/ob-forth.el (org-babel-execute:forth):
* lisp/ob-fortran.el (org-babel-execute:fortran):
* lisp/ob-gnuplot.el (org-babel-gnuplot-process-vars):
(org-babel-expand-body:gnuplot):
(org-babel-execute:gnuplot):
* lisp/ob-groovy.el (org-babel-execute:groovy):
* lisp/ob-haskell.el (org-babel-execute:haskell):
* lisp/ob-io.el (org-babel-execute:io):
* lisp/ob-java.el (org-babel-execute:java):
* lisp/ob-js.el (org-babel-execute:js):
* lisp/ob-latex.el (org-babel-execute:latex):
* lisp/ob-ledger.el (org-babel-execute:ledger):
* lisp/ob-lilypond.el (org-babel-lilypond-process-basic):
* lisp/ob-lisp.el (org-babel-expand-body:lisp):
(org-babel-execute:lisp):
* lisp/ob-lua.el (org-babel-execute:lua):
* lisp/ob-maxima.el (org-babel-execute:maxima):
* lisp/ob-mscgen.el (org-babel-execute:mscgen):
* lisp/ob-ocaml.el (org-babel-execute:ocaml):
* lisp/ob-octave.el (org-babel-execute:octave):
* lisp/ob-org.el (org-babel-execute:org):
* lisp/ob-perl.el (org-babel-execute:perl):
* lisp/ob-picolisp.el (org-babel-execute:picolisp):
* lisp/ob-plantuml.el (org-babel-execute:plantuml):
* lisp/ob-python.el (org-babel-execute:python):
* lisp/ob-ruby.el (org-babel-execute:ruby):
* lisp/ob-sass.el (org-babel-execute:sass):
* lisp/ob-scala.el (org-babel-execute:scala):
* lisp/ob-scheme.el (org-babel-execute:scheme):
* lisp/ob-screen.el (org-babel-execute:screen):
(org-babel-prep-session:screen):
* lisp/ob-shell.el (org-babel-execute:shell):
(org-babel-variable-assignments:shell):
(org-babel-sh-evaluate):
* lisp/ob-shen.el (org-babel-execute:shen):
* lisp/ob-sql.el (org-babel-execute:sql):
* lisp/ob-sqlite.el (org-babel-execute:sqlite):
* lisp/ob-tangle.el (org-babel-tangle):
(org-babel-tangle-single-block):
* lisp/org-src.el (org-src-associate-babel-session):
* lisp/org.el (org-next-link):
Use `assq' instead of `assoc' with :keyword keys.
2016-09-23 11:20:09 +01:00
Nicolas Goaziou 0ba465b899 ob-J: Add missing keywords in defcustom
* lisp/ob-J.el (org-babel-J-command): Add missing keywords.
2016-09-14 23:27:17 +02:00
Marco Wahl f61bf84836 ob-J: allow also letter 'j' indicate J code
* lisp/ob-J.el (org-babel-execute:j): Make `org-babel-execute:j' an
  alias of `org-babel-execute:J'.  This allows to use the letter
  'j' (and not only 'J') to identify the J-language for a source-block.

  Note: The source-block marked with 'j' gets the highlighting
  according j-mode.
2016-09-14 11:54:01 +02:00
Marco Wahl bb91f138b9 ob-J: New variable to specify the call to J
* lisp/ob-J.el (org-babel-J-command): New custom variable
  `org-babel-J-command' to store the command to call J.
2016-09-14 11:31:56 +02:00
Nicolas Goaziou 4f63cfabb3 Deprecate `org-babel-trim' in favor of `org-trim'
* lisp/org.el (org-trim): Add optional argument.

* contrib/lisp/ob-mathematica.el (org-babel-execute:mathematica):
* contrib/lisp/org-bibtex-extras.el (obe-html-export-citations):
* contrib/lisp/org-mime.el (org-mime-compose):
* lisp/ob-C.el (org-babel-C-execute):
* lisp/ob-calc.el (org-babel-execute:calc):
* lisp/ob-clojure.el (org-babel-expand-body:clojure):
* lisp/ob-core.el (org-babel-initiate-session):
(org-babel-parse-multiple-vars):
(org-babel-read-element):
(org-babel-insert-result):
(org-babel-expand-noweb-references):
(org-babel-trim): Mark obsolete.
* lisp/ob-forth.el (org-babel-forth-session-execute):
* lisp/ob-fortran.el (org-babel-execute:fortran):
* lisp/ob-haskell.el (org-babel-execute:haskell):
* lisp/ob-latex.el (org-babel-expand-body:latex):
* lisp/ob-lisp.el (org-babel-expand-body:lisp):
* lisp/ob-ocaml.el (org-babel-execute:ocaml):
* lisp/ob-octave.el (org-babel-octave-evaluate-session):
* lisp/ob-python.el (org-babel-python-evaluate-external-process):
(org-babel-python-evaluate-session):
* lisp/ob-ref.el (org-babel-ref-split-args):
* lisp/ob-ruby.el (org-babel-ruby-evaluate):
* lisp/ob-shell.el (org-babel-sh-evaluate):
* lisp/ob-table.el (org-sbe):
* lisp/ob-tangle.el (org-babel-spec-to-string):
* lisp/org-bibtex.el (org-bibtex-get):
* testing/lisp/test-ob.el (test-ob/parse-header-args): Use `org-trim'
  instead of `org-babel-trim'.
2016-06-21 15:33:00 +02:00
Kyle Meyer 6345de2d05 Merge branch 'maint' 2016-01-09 17:43:27 -05:00
Kyle Meyer 6bc48c5f41 Update copyright years 2016-01-09 17:12:03 -05:00
Nicolas Goaziou f0bf77e82a Activate lexical binding in some libraries
* lisp/ob-C.el (org-babel-prep-session:C):
(org-babel-load-session:C):
* lisp/ob-J.el:
(org-babel-expand-body:J):
(org-babel-execute:J):
* lisp/ob-R.el:
(org-babel-expand-body:R):
* lisp/ob-abc.el:
(org-babel-execute:abc):
(org-babel-prep-session:abc):
* lisp/ob-asymptote.el:
(org-babel-execute:asymptote):
(org-babel-prep-session:asymptote):
* lisp/ob-awk.el:
(org-babel-expand-body:awk):
* lisp/ob-calc.el:
(org-babel-expand-body:calc):
* lisp/ob-clojure.el:
* lisp/ob-comint.el:
(org-babel-comint-in-buffer):
(org-babel-comint-with-output):
(org-babel-comint-eval-invisibly-and-wait-for-file):
* lisp/ob-coq.el:
* lisp/ob-css.el:
(org-babel-execute:css):
(org-babel-prep-session:css):
* lisp/ob-ditaa.el:
(org-babel-execute:ditaa):
(org-babel-prep-session:ditaa):
* lisp/ob-dot.el:
(org-babel-execute:dot):
(org-babel-prep-session:dot):
* lisp/ob-ebnf.el:
* lisp/ob-emacs-lisp.el:
* lisp/ob-eval.el:
* lisp/ob-forth.el:
* lisp/ob-fortran.el:
(org-babel-execute:fortran):
(org-babel-prep-session:fortran):
(org-babel-load-session:fortran):
* lisp/ob-gnuplot.el:
(org-babel-expand-body:gnuplot):
(org-babel-prep-session:gnuplot):
(org-babel-gnuplot-initiate-session):
* lisp/ob-groovy.el:
(org-babel-prep-session:groovy):
(org-babel-groovy-initiate-session):
* lisp/ob-haskell.el:
(org-babel-haskell-initiate-session):
* lisp/ob-io.el:
(org-babel-prep-session:io):
(org-babel-io-initiate-session):
* lisp/ob-java.el:
(org-babel-execute:java):
* lisp/ob-js.el:
* lisp/ob-keys.el:
* lisp/ob-latex.el:
(org-babel-prep-session:latex):
* lisp/ob-ledger.el:
(org-babel-execute:ledger):
(org-babel-prep-session:ledger):
* lisp/ob-lilypond.el:
(org-babel-lilypond-commands):
(org-babel-lilypond-process-basic):
(org-babel-prep-session:lilypond):
(org-babel-lilypond-parse-line-num):
* lisp/ob-lisp.el:
* lisp/ob-makefile.el:
(org-babel-execute:makefile):
(org-babel-prep-session:makefile):
* lisp/ob-matlab.el:
* lisp/ob-maxima.el:
(org-babel-prep-session:maxima):
* lisp/ob-mscgen.el:
(org-babel-prep-session:mscgen):
* lisp/ob-ocaml.el:
(org-babel-execute:ocaml):
(org-babel-prep-session:ocaml):
* lisp/ob-octave.el:
(org-babel-execute:octave):
(org-babel-octave-initiate-session):
* lisp/ob-org.el:
(org-babel-prep-session:org):
* lisp/ob-perl.el:
(org-babel-prep-session:perl):
(org-babel-perl--var-to-perl):
(org-babel-perl-initiate-session):
* lisp/ob-picolisp.el:
(org-babel-expand-body:picolisp):
(org-babel-execute:picolisp):
* lisp/ob-plantuml.el:
(org-babel-execute:plantuml):
(org-babel-prep-session:plantuml):
* lisp/ob-processing.el:
(org-babel-prep-session:processing):
* lisp/ob-python.el:
(org-babel-python-initiate-session):
* lisp/ob-ref.el:
(org-babel-ref-resolve):
* lisp/ob-ruby.el:
(org-babel-ruby-initiate-session):
* lisp/ob-sass.el:
(org-babel-execute:sass):
(org-babel-prep-session:sass):
* lisp/ob-scala.el:
(org-babel-execute:scala):
(org-babel-prep-session:scala):
(org-babel-scala-initiate-session):
* lisp/ob-scheme.el:
* lisp/ob-screen.el:
(org-babel-prep-session:screen):
(org-babel-screen-session-write-temp-file):
(org-babel-screen-test):
* lisp/ob.el:
* lisp/org-colview.el:
(org-columns-todo):
(org-columns-set-tags-or-toggle):
(org-columns-new):
(org-columns-uncompile-format):
(org-agenda-colview-summarize):
* lisp/org-footnote.el:
(electric-indent-mode):
* lisp/org-indent.el:
(org-indent-refresh-maybe):
* lisp/org-list.el:
* lisp/org-macro.el:
(org-macro--collect-macros):
* lisp/org-src.el:
* lisp/org-table.el:
(sort-fold-case):
(org-table-create):
(org-table-field-info):
(org-table-transpose-table-at-point):
(org-table-remove-rectangle-highlight):
(orgtbl-create-or-convert-from-region):
(org-define-lookup-function):
* lisp/ox-ascii.el:
(org-ascii-format-drawer-function):
(org-ascii--has-caption-p):
(org-ascii-bold):
(org-ascii-center-block):
(org-ascii-clock):
(org-ascii-code):
(org-ascii-dynamic-block):
(org-ascii-entity):
(org-ascii-example-block):
(org-ascii-export-snippet):
(org-ascii-export-block):
(org-ascii-fixed-width):
(org-ascii-footnote-reference):
(org-ascii-horizontal-rule):
(org-ascii-inline-src-block):
(org-ascii-format-inlinetask-default):
(org-ascii-italic):
(org-ascii-keyword):
(org-ascii-latex-environment):
(org-ascii-latex-fragment):
(org-ascii-line-break):
(org-ascii-node-property):
(org-ascii-planning):
(org-ascii-quote-block):
(org-ascii-radio-target):
(org-ascii-special-block):
(org-ascii-src-block):
(org-ascii-statistics-cookie):
(org-ascii-subscript):
(org-ascii-superscript):
(org-ascii-strike-through):
(org-ascii-timestamp):
(org-ascii-underline):
(org-ascii-verbatim):
(org-ascii-verse-block):
(org-ascii-filter-headline-blank-lines):
(org-ascii-filter-paragraph-spacing):
(org-ascii-filter-comment-spacing): Use lexical binding.
2015-10-26 01:56:00 +01:00
Oleh Krehel b3ef4b9ea8 ob-J: adapt to new `org-babel-process-params'
* lisp/ob-J.el (org-babel-execute:J): Use `cdr' instead of `nth 1' to
  get the session info.
2014-08-26 09:16:28 +02:00
Achim Gratz 8e4b52235c ob-J: Do not use cl or cl-lib functions at runtime
* lisp/ob-J.el: Do not use `second', `third', `fourth', `minusp' and
  `plusp'.
2014-06-01 14:22:42 +02:00
Nicolas Goaziou a24e6420be ob-J: Silence byte-compiler 2014-01-07 21:56:22 +01:00
Oleh Krehel 13bb11695b ob-J: Fix docstrings.
* lisp/ob-J.el (org-babel-J-interleave-echos): Update docstring.
  (org-babel-J-interleave-echos-except-functions): Update docstring.
  (obj-get-string-alignment): Update docstring.
  (obj-string-match-m): Update docstring.
2014-01-02 11:10:39 +01:00
Oleh Krehel e23bbda0aa ob-J.el: Fix wrong name in a call.
* lisp/ob-J.el (obj-get-string-alignment): Fix bug.
2013-12-31 22:56:20 +01:00
Oleh Krehel 8c67695e62 ob-J.el: Fix display of 3-dimensional arrays.
* lisp/ob-J.el (org-babel-J-interleave-echos): Change '' to ','.
  (org-babel-J-interleave-echos-except-functions): Improve regexp
  and change '' to ','.
  (org-babel-J-strip-whitespace): Change '' to ','.
  (obj-get-string-alignment): New function.
  (org-babel-J-print-block): Accomodate left- and right-aligned tables.
  (obj-match-second-space): Rename.
  (obj-match-second-space-left): Renamed from `obj-match-second-space'.
  (obj-match-second-space-right): New function.
2013-12-31 22:46:02 +01:00
Oleh Krehel 0ef823725b ob-J (obj-strip-leading-ws): Remove redundant function.
* lisp/ob-J.el (obj-strip-leading-ws): Remove function.
  (org-babel-J-print-block): Use `org-trim' instead.
2013-12-23 14:48:06 +01:00
Oleh Krehel 7ea6c3cf38 ob-J: Fix explicit body regexp.
* lisp/ob-J.el (org-babel-J-interleave-echos-except-functions):
  Explicit body has to end either with "\n)\n" or with "\n)$".
2013-12-23 14:39:43 +01:00
Oleh Krehel fa2e39148f lisp/ob-J.el (obj-string-match-m): add missing function 2013-12-22 18:48:29 +01:00
Eric Schulte 39a6ce6e46 removed top-level (require 'j-console) 2013-12-21 11:58:18 -07:00
Oleh Krehel 98811ad800 Add org-babel support for J. 2013-12-20 10:00:02 -07:00