Commit Graph

26939 Commits

Author SHA1 Message Date
Ihor Radchenko 85c94ecfc2
ox-latex: Improve warning for unexpected org-latex-src-block-backend
* lisp/ox-latex.el (org-latex-inline-src-block):
(org-latex-src-block): Update the warning text, explicitly mentioning
the variable name to be adjusted.

Reported-by: Guillaume MULLER <guillaume.muller@emse.fr>
Link: https://orgmode.org/list/b5c056cb-3258-4a11-2d9b-33c97b112d62@emse.fr
2023-08-24 10:37:52 +03:00
Ihor Radchenko 3c3db7b337
oc-basic: Fix detecting changes in symlinked bibliography
* lisp/oc-basic.el (org-cite-basic--parse-bibliography): Use
`file-truename' to follow symlinks first before checking bibliography
file change times.

Reported-by: Leo Butler <Leo.Butler@umanitoba.ca>
Link: https://orgmode.org/list/877cpmkds1.fsf@t14.reltub.ca
2023-08-24 10:21:21 +03:00
Ihor Radchenko 1665283f25
Merge branch 'bugfix' 2023-08-24 10:18:02 +03:00
Liu Hui 973e50c839
* lisp/org.el (org-at-timestamp-p): Fix match groups in docstring
The docstring was not accurate from the times when group information
was added to it.  The patch uses the groups, as they appear in the
function code itself.
2023-08-24 10:16:22 +03:00
Ihor Radchenko 5e7427c6d1
* lisp/ob-core.el (org-babel-hide-result-toggle): Document FORCE argument 2023-08-23 14:24:53 +03:00
Ihor Radchenko 430c72924c
ob-ruby: Fix ruby tests
* lisp/ob-ruby.el (org-babel-ruby-prompt):
(org-babel-ruby-define-prompt): New variables used to set appropriate
unique prompt and disable echo in session.
(org-babel-ruby-initiate-session): Setup prompt and echo during
session initialization.
(org-babel-ruby-evaluate): Rely on `org-babel-ruby-initiate-session'
to setup prompt and echo.  Re-setting the prompt back after every
evaluation can be tricky because of async nature of the prompt, so it
is now dropped.
2023-08-23 14:19:52 +03:00
Allen Li c905565fa8
org-element: Raise gc-cons-threshold for org-element-cache-map
This garbage collects many times when calling
`org-get-buffer-tags' (such as during tag completion) in a large file
with many tags.  Raise `gc-cons-threshold' as this may affect other
callers in large files.

Note that `org-element-parse-buffer' also raises `gc-cons-threshold'
as a precedent.

This has no effect on most callers and increases performance for
extreme cases.

* lisp/org-element.el (org-element-cache-map): Raise
`gc-cons-threshold'.
2023-08-23 12:54:43 +03:00
Jack Kamm 579e8c5723 ob-python: Results handling for dicts, dataframes, arrays, plots
Thanks to Ihor Radchenko and Liu Hui for valuable feedback on this
patch.

* lisp/ob-python.el (org-babel-execute:python): Parse graphics-file
from params, and pass it to `org-babel-python-evaluate'.
(org-babel-python--output-graphics-wrapper): New constant.  Python
code to save graphical output.
(org-babel-python--def-format-value): New constant.  Python function
to format and save value results to file.  Includes handling for
graphics, dataframes, and arrays.
(org-babel-python-table-or-string): Prevent `org-babel-script-escape'
from mangling dict results.
(org-babel-python--setup-session): New function to
run setup code within Python session.
(org-babel-python-initiate-session-by-key): Replace lambda with
`org-babel-python--setup-session' in `python-shell-first-prompt-hook',
or run it directly if the session was started outside Org.
(org-babel-python-wrapper-method): Removed.  Instead use part of the
string directly in `org-babel-python-evaluate-external-process'.
(org-babel-python-pp-wrapper-method): Removed.  Pretty printing is now
handled by `org-babel-python--def-format-value'.
(org-babel-python--exec-tmpfile): Removed.  Instead use the raw string
directly in `org-babel-python-evaluate-session'.
(org-babel-python-format-session-value): Updated to use
`org-babel-python--def-format-value' for formatting value result.
(org-babel-python-evaluate): New parameter graphics-file.  Pass
graphics-file onto downstream helper functions.
(org-babel-python-evaluate-external-process): New parameter
graphics-file.  Use `org-babel-python--output-graphics-wrapper' for
graphical output.  For value result, use
`org-babel-python--def-format-value'.  Don't call `org-trim' on
results, to prevent misalignment of pandas DataFrames.
(org-babel-python-evaluate-session): New parameter graphics-file.  Use
`org-babel-python--output-graphics-wrapper' for graphical output.
Replace the removed constant `org-babel-python--exec-tmpfile' with the
string directly.  Rename local variable tmp-results-file to
results-file, which may take the value of graphics-file when provided.
(org-babel-python-async-evaluate-session): New parameter
graphics-file.  Use `org-babel-python--output-graphics-wrapper' for
graphical output.  Rename local variable tmp-results-file to
results-file, which may take the value of graphics-file when provided.
2023-08-22 16:22:17 -07:00
Ihor Radchenko 53c9d91d3c
org-element: Fix post-blank shared between items
* lisp/org-element.el (org-element-item-parser): Do not parse beyond
LIMIT - they may extend :post-blank beyond parent list contents.
(org-element-plain-list-parser): Make sure that plain list always owns
the trailing blank lines.
(org-element-cache-version): Bump cache version.
* testing/lisp/test-org-element.el (test-org-element/item-parser): Add
test.

Reported-by: Tom Alexander <tom@fizz.buzz>
Link: https://orgmode.org/list/1c833eb8-c556-437b-ac5b-be360ebcc869@app.fastmail.com
2023-08-22 11:25:59 +03:00
Ihor Radchenko 80ae8462a6
org-element--standard-properties: Re-order, putting boundaries in order
* lisp/org-element-ast.el (org-element--standard-properties): Re-order
the properties, making the element boundaries in order as they will
appear in buffer.  Re-group other properties.
2023-08-22 11:23:16 +03:00
Ihor Radchenko 19a1a5024b
Update version number for the 9.6.8 release 2023-08-22 10:35:22 +03:00
Ihor Radchenko 7219b006bd
org-element: Fix loading obsolete persistent caches
* lisp/org-element.el (org-element-cache-version): New constant
defining the current cache version.
(org-element-cache-reset): Use the new variable.
* lisp/org.el (org-mode): Assert loading the correct cache version.

Reported-by: Gregor Zattler <telegraph@gmx.net>
Link: https://orgmode.org/list/87350cvm3d.fsf@no.lan
2023-08-21 13:24:41 +03:00
Ihor Radchenko 168b99ba94
org-babel-join-splits-near-ch: Fix the docstring
* lisp/ob-core.el (org-babel-join-splits-near-ch): Explain all the
arguments and what the function does.
2023-08-21 13:01:54 +03:00
Ihor Radchenko 680138d7ff
fixup! test-org-colview/...: Fix Emacs 28 compatibility 2023-08-21 12:58:44 +03:00
Ihor Radchenko 8b35734b49
test-org-colview/...: Fix Emacs 28 compatibility
*
testing/lisp/test-org-colview.el (test-org-colview/columns--move-row-stay-at-the-same-column):
Skip the test in Emacs <29 where it is not possible to determine
visual column.
2023-08-21 10:21:33 +03:00
Ihor Radchenko 299193bf09
org-display-remote-inline-images: Add new allowed value t
* lisp/org.el (org-display-remote-inline-images): Allow value t as
alias to cache.
(org--create-inline-image): Handle t value.
2023-08-20 14:15:49 +03:00
Ihor Radchenko e08d878314
org-columns-redo: Fix when `org-columns' is called with prefix arg
* lisp/org-colview.el (org-columns-global): New buffer-local variable
holding GLOBAL argument to `org-columns'.
(org-columns): Record the GLOBAL arg.
(org-columns-redo): Fix `org-columns' call, using
`funcall-interactively' and passing GLOBAL arg as well.  The previous
usage of `call-interactively' made no sense because
`org-column-current-fmt' would not be passed as an argument -
`call-interactively' does not allow passing arguments.

Link: https://orgmode.org/list/877culo1pb.fsf@localhost
2023-08-20 13:39:50 +03:00
Sławomir Grochowski 650e42996e
lisp/org-colview.el: Add new commands to move column view table row
* doc/org-manual.org (org-columns-move-row-up,
org-columns-move-row-down, org-columns-move-left,
org-columns-move-right): Document two new and two old commands.
* etc/ORG-NEWS (New commands to move rows up & down): Document the new
feature.
* lisp/org-colview.el (org-columns--move-row, org-columns-move-row-up,
org-columns-move-row-down): New functions.
* testing/lisp/test-org-colview.el (test-org-colview/columns-move-row-down,
test-org-colview/columns-move-row-up,
test-org-colview/columns--move-row-stay-at-the-same-column,
test-org-colview/columns-move-row-down-with-subheading): New tests.
2023-08-20 13:39:47 +03:00
Ihor Radchenko 58c5c5882c
org-columns: Fix when adding spaces to headings
* lisp/org-colview.el (org-columns): Use markers to store collected
column headline value positions.  This is necessary because
`org-columns--display-here' may modify buffer, invalidating headline
positions returned by `org-scan-tags'.

Reported-by: Jakob Schöttl <jschoett@gmail.com>
Link: https://orgmode.org/list/831f07e0-d86a-a0dc-c967-e48906f520a1@gmail.com
2023-08-20 11:54:20 +03:00
Ihor Radchenko 06714dea79
org-babel-current-result-hash: Mark unused argument
* lisp/ob-core.el (org-babel-current-result-hash): Mark INFO argument
as unused.  `org-babel-where-is-src-block-results' does not use INFO
argument even when passed.
2023-08-20 11:45:04 +03:00
Ihor Radchenko f86a2fb726
org-element--string-cache: Use hash table instead of obarray
* lisp/org-element.el (org-element--string-cache): Change the value to
hash table.  Update the docstring.
(org-element--get-cached-string): Use hash table.

obarrays have a number of rough edges when used for purposes other
than interning symbols.  Using obarrays may cause unexpected problems
and hash tables are preferred.  Credit: Stefan Monnier.
2023-08-20 10:14:57 +03:00
Ihor Radchenko dd2f05f592
fixup! fixup! org-insert-heading: Fix when folded text is kept right at the new heading 2023-08-20 09:43:25 +03:00
Ihor Radchenko 7a4784b122
org-fast-tag-selection: Fix when C-g is pressed
* lisp/org.el (org-fast-tag-selection): Fix "no catch" error.  But do
not directly set `quit-flag' as it was done in the earlier versions.
Instead, call `keyboard-quit', allowing it to perform the necessary
cleanups.
2023-08-20 09:36:40 +03:00
Ihor Radchenko e17ca87994
Merge branch 'bugfix' 2023-08-20 09:30:59 +03:00
Ihor Radchenko 7b38670e69
fixup! org-insert-heading: Fix when folded text is kept right at the new heading
* lisp/org.el (org-insert-heading): Fix missing newline when inserting
before existing heading.
* testing/lisp/test-org.el (test-org/insert-heading): Add test
checking for the fixed failure.  Update tests.
(test-org/insert-todo-heading-respect-content): Update tests.

Reported-by: Max Nikulin <manikulin@gmail.com>
Link: https://orgmode.org/list/ubrugh$be1$1@ciao.gmane.io
2023-08-20 09:28:15 +03:00
Ihor Radchenko 35960e1614
org-babel-execute-subtree: Document the argument in the docstring
* lisp/ob-core.el (org-babel-execute-subtree): Clarify the meaning of
command argument in the docstring.
2023-08-19 12:47:53 +03:00
Ihor Radchenko bbdf9781c2
test-org/insert-todo-heading-respect-content: Fix tests
*
testing/lisp/test-org.el (test-org/insert-todo-heading-respect-content):
Do not assert newline after newly added heading.  See 52bc95676.
2023-08-19 12:16:36 +03:00
Ihor Radchenko 54f8b0bfd0
Merge branch 'bugfix' 2023-08-19 10:55:08 +03:00
Ihor Radchenko 52bc95676c
org-insert-heading: Fix when folded text is kept right at the new heading
* lisp/org.el (org-insert-heading): Do not slurp blank lines after
previous heading into the contents of the newly added one.  These
blank lines might be folded and we end up with point before folded
spaces * <point>...
* testing/lisp/test-org.el (test-org/insert-heading): Add test.
(test-org/insert-todo-heading-respect-content): Do not expect trailing
newline after the newly added heading.  The test did not intentionally
test this particular behavior (other tests do not expect trailing
newlines to be _always_ added).

Reported-by: Max Nikulin <manikulin@gmail.com>
Link: https://orgmode.org/list/ubpcoi$f7n$1@ciao.gmane.io
2023-08-19 10:52:25 +03:00
Ihor Radchenko 928f2d7fb0
Revert "org-return: Do not insert inside folded region"
This reverts commit a25d00d5df.

Direct call to `org-fold-check-before-invisible-edit' is no longer
necessary on main.  We use `org-fold-catch-invisible-edits-commands'.
2023-08-19 10:27:09 +03:00
Ihor Radchenko 73e332a307
Merge branch 'bugfix' 2023-08-19 10:27:00 +03:00
Ihor Radchenko a25d00d5df
org-return: Do not insert inside folded region
* lisp/org.el (org--newline): When called interactively, check for
invisible edits.

Reported-by: Kaiyu Zheng <kaiyu_zheng@alumni.brown.edu>
Link: https://orgmode.org/list/87wmxs8hxt.fsf@localhost
2023-08-19 10:23:40 +03:00
Ihor Radchenko 3cbd9f4233
org-lint: New checker for SCHEDULED/DEADLINE with inactive timestamp
* lisp/org-lint.el (org-lint-inactive-planning): Add new checker.

Link: https://orgmode.org/list/875y5tlouo.fsf@localhost
2023-08-18 15:21:10 +03:00
Ihor Radchenko 7cc208af91
org-agenda: Do not err on SCHEDULED/DEADLINE with inactive timestamp
* lisp/org-agenda.el (org-agenda-get-deadlines):
(org-agenda-get-scheduled): Ignore SCHEDULED/DEADLINE set to inactive
timestamps.  Previously, an error would be thrown.

Reported-by: Christian Barthel <bch@online.de>
Link: https://orgmode.org/list/875y5tlouo.fsf@localhost
2023-08-18 15:19:25 +03:00
Ihor Radchenko d560a2d739
org-lint-invalid-id-link: Only update ID locations if there are ID links
* lisp/org-lint.el (org-lint-invalid-id-link): Avoid running
`org-id-update-id-locations' when there are no ID links in the linted
file.
2023-08-18 15:18:50 +03:00
Ihor Radchenko 83fd03fb6d
org-attach: Fix when called from agenda
* lisp/org-attach.el (org-attach): Do not try to call `org-attach-dir'
from non-Org buffer.  This requires parser, which cannot run in agenda
buffer.
2023-08-18 13:24:13 +03:00
Ihor Radchenko 79aa149143
org-babel-map-executable: Describe header arg in the docstring
* lisp/ob-core.el (org-babel-execute-buffer): Mention in the docstring
how prefix argument is handled.
2023-08-18 13:15:10 +03:00
Ihor Radchenko b3660cf135
* testing/lisp/test-org-attach-git.el: Avoid using global git config
(test-org-attach-git/with-annex): Disable global git config during
testing.
2023-08-18 12:03:58 +03:00
Juan Manuel Macias 2eb4fd8900
lisp/ox-latex.el: Add the `:literal' attribute to verse block.
* (org-latex-verse-block): Now the treatment of blank lines is
consistent with the syntax of the LaTeX `verse' environment, and the
one provided by the `verse' package.  If the `:literal' attribute is
used, all blank lines are preserved and exported as
`\vspace*{\baselineskip}', including the blank lines before or after
contents.  The rx code has been suggested by Ihor Radchenko, to
improve readability.

* doc/org-manual.org (Verse blocks in LaTeX export): The new feature
is documented.

* testing/lisp/test-ox-latex.el (test-ox-latex/verse): Updated.
2023-08-18 11:41:24 +03:00
Ihor Radchenko f1359546ad
org-element-at-point: Throw an error when not in org-mode
* lisp/org-element.el (org-element-at-point): Explicitly throw an
error when not in org-mode buffer.  The parser expects certain
buffer-local constants and may fail otherwise.  It is better to
indicate the problem explicitly instead of dealing with cryptic
generic errors.
(org-element-plain-list-interpreter):
* testing/lisp/test-ox.el (test-org-export/expand-include/links): Make
sure that we never invoke parser in non-Org buffers.
2023-08-18 11:11:17 +03:00
Ihor Radchenko 3ec0933122
Fix Emacs 27 test failure
* lisp/org-id.el (org-id-find-id-in-file): Work around change
functions not always firing up in Emacs 27 when using
`insert-file-contents'.
2023-08-18 11:10:12 +03:00
Ihor Radchenko 933d282881
Fix Emacs 27 false-positive warnings
* lisp/org-element-ast.el (org-element--plist-property): Shield
annoying warning spam with `with-no-warnings'.  The warnings are not
present in newer Emacs.
* lisp/org-element.el (org-element--interpret-affiliated-keywords):
Suppress warning about two token unused `_' arguments.
* lisp/org-id.el (org-id-find-id-in-file): Suppress warning about
number of arguments.
2023-08-18 11:08:56 +03:00
Ihor Radchenko 9e40208547
test-org-agenda/todo-selector: Remove stray `message' call
* testing/lisp/test-org-agenda.el: Remove leftover message call.
2023-08-18 11:08:12 +03:00
Ihor Radchenko 3b49db8755
Revert "Prefer `string-search' when matching exact strings"
This reverts commit e9110a8dd7.

`string-search' is not available in Emacs<28 and also always
case-sensitive.
2023-08-18 11:00:13 +03:00
Ihor Radchenko d0c7cd48eb
org-babel-do-key-sequence-in-edit-buffer: Mention argument in docstring
* lisp/ob-core.el (org-babel-do-key-sequence-in-edit-buffer): Mention
argument KEY in the docstring.
2023-08-17 15:54:20 +03:00
Ihor Radchenko 1ae611c7e3
fixup! org-id-find-id-in-file: Prefer using temporary buffer
* lisp/org-id.el (org-id-find-id-in-file): Fix Emacs 27 compatibility.
Avoid modifications not captured by element cache.
2023-08-17 15:45:13 +03:00
Ihor Radchenko d1e4b93519
org-copy-subtree: Do not consider inlinetask to be a subtree of its own
* lisp/org.el (org-copy-subtree): Go up to parent heading when we are
at or inside inlinetask.
2023-08-17 14:25:43 +03:00
Ihor Radchenko f285ae37b3
org-agenda-get-todos: Fix for todo keywords that can be interpreted as regexp
* lisp/org-agenda.el (org-agenda-get-todos): Use `regexp-quote' to
match keywords.
(org-select-this-todo-keyword): Add docstring, clarifying the allowed
values.
* testing/lisp/test-org-agenda.el (test-org-agenda/todo-selector): Add
new test.

Reported-by: spookygostee@gmail.com
Link: https://orgmode.org/list/87jztuzzpl.fsf@gmail.com
2023-08-17 14:15:14 +03:00
Jonathan Gregory f78a3c2bdc
lisp/ob-lilypond.el: Prevent full page results in basic-mode
* ob-lilypond.el (org-babel-lilypond-paper-settings): New variable.
* lisp/ob-lilypond.el (org-babel-lilypond-process-basic): Pass the new
variable value to correctly set paper size on the generated transcript.

Link: https://list.orgmode.org/87a5w15jur.fsf@localhost/

TINYCHANGE
2023-08-17 13:20:08 +03:00
Ihor Radchenko b2e34474f5
org-lint: Allow jumping outside narrowing when jumping to source
* lisp/org-lint.el (org-lint--jump-to-source): When buffer is
narrowed and the location to jump is outside the narrowing, widen.
2023-08-17 12:50:52 +03:00