* lisp/ob-js.el (org-babel-js-eoe): indicate end of input
(org-babel-execute:js): support for session evaluation
(org-babel-prep-session:js): fleshed out definition
(org-babel-js-initiate-session): can initiate a session using
mozrepl
* lisp/ob-scheme.el (org-babel-scheme-eoe): for marking the end of
session-based evaluation
(org-babel-execute:scheme): now supports session-based evaluation
(org-babel-prep-session:scheme): now works and defines variables
(org-babel-scheme-initiate-session): now works using run-scheme from
cmuscheme
* ob.el (org-babel-temp-file): Don't use babel temporary
directory in remote case; use make-temp-file with remote file
name so that temp file is guaranteed not to exist previously
on remote machine.
(org-babel-tramp-localname): New function to return local name
portion of possibly remote file specification
* ob-R.el (org-babel-R-evaluate-external-process): Respond to
changes in `org-babel-temp-file'; pass local file name to
remote R process.
(org-babel-R-evaluate-session) Respond to
changes in `org-babel-temp-file'; pass local file name to
remote R process.
* ob-R.el (org-babel-R-write-object-command): New unified R
command for writing results to file
(org-babel-R-wrapper-method): Remove variable
(org-babel-R-wrapper-lastvar): Remove variable
(org-babel-R-evaluate-external-process): Use new R command
(org-babel-R-evaluate-session): Use new R command
* ob-comint.el (org-babel-comint-eval-invisibly-and-wait-for-file): New
function to evaluate code invisibly and block until output file exists.
* ob-R.el (org-babel-R-evaluate-session): Use
`ess-eval-buffer' to evaluate R code in session for :results
value. Write result to file invisibly using new function
`org-babel-comint-eval-invisibly-and-wait-for-file'.
These changes move to using standard ESS code evaluation in R sessions
in the :results value case, which avoids unnecessary output to the
comint buffer. In addition, the R command responsible for writing the
result to file is hidden from the user.
Thanks to Michael Gauland for pointing out this fix
* lisp/ob-plantuml.el (org-babel-execute:plantuml): wrapping in-file
and out-file in shell-quote-argument
* org-docview.el (org-docview-store-link): Use expanded macro to get
current page.
(doc-view-goto-page, image-mode-window-get): Declare functions for
byte compiler.
doc-view mode is not available in Emacs22. We need to use the
expanded form of the macro `doc-view-current-page' at compile-time.
* Makefile (LISPF): adding ob-scheme.el to the makefile
* lisp/ob-scheme.el: very preliminary support for evaluating scheme
code blocks
* lisp/org.el (org-babel-load-languages): adding scheme
I just tried adding :step day to
org-agenda-clockreport-parameter-plist, but then hitting R in the
agenda caused a crash, since org-clocktable-steps expects ts and te to
be strings, though in fact they are Gregorian day numbers.
This patch fixes the problem for me. It's quite ugly, so I don't
expect it to be committed in its current form :) but I hope it serves
as inspiration for someone to figure out the right way to solve this.
* lisp/org-clock.el (org-clocktable-steps): Allow ts and te to be
day numbers.
TINYCHANGE
Thanks to Nick Dokos for pointing out this as a fix to a Babel issue
* lisp/org-macs.el (org-save-outline-visibility): moved from org.el
* lisp/org.el: moved `org-save-outline-visibility' to org-macs.el
Thanks to David Hajage for suggesting this fix
* lisp/ob-org.el (org-babel-default-header-args:org): additional
":results silent" default header argument for org code blocks
this makes it possible to export while not evaluating some code
blocks
* lisp/ob-exp.el (org-babel-exp-do-export): removing hacky ":noeval",
which is now an alias to ":eval no"
* lisp/ob.el (org-babel-confirm-evaluate): ":noeval" is an alias for
":eval no", also no longer throwing errors
(org-babel-header-arg-names): adding both eval and noeval as general
header arguments
(org-babel-execute-src-block): now using the new non-error
confirmation functionality
ob-org has two non-standard header arguments in that it exports it's
results by default and the result type defaults to raw, this ensures
that the body of a begin_src org block exports transparently.
This is a breaking change in that if you are currently using org
code blocks to export org-fontified code you will have to set the
":exports" header argument for org-mode blocks to "code" on a block,
file, language or system-wide basis.
* Makefile (LISPF): adding ob-org.el to the makefile
* lisp/ob-org.el: defines handling of org code blocks
* lisp/ob.el (org-babel-insert-result): now when "org" is a result
type the results are wrapped in an org code block
* Makefile (LISPF): now compiling and installing ob-plantuml.el
* contrib/scripts/.gitignore : ignores the plantuml.jar file, so that
it can be located next to ditaa.jar
* lisp/ob-plantuml.el: adding copyright notice and FSF attribution
(org-plantuml-jar-path): now a defcustom
(org-babel-execute:plantuml): now using org-babel-eval which
displays error messages
* lisp/org.el (org-babel-load-languages): ob-plantuml is now part of
org-babel-load-languages
Thanks to Noorul Islam for pointing out this issue
* lisp/ob.el (org-babel-remove-temporary-directory): the version of
`delete-directory' found in files.el can not be assumed to be
present on all versions, so this copies the recursive behavior of
that command in such a way that all calls to delete-directory will
also work with the built-in internal C implementation of that
function. This is not overly difficult as all elements of the
directory can be assumed to be files.
* lisp/ob.el (org-babel-temporary-directory): variable to hold the
value of the Babel temporary directory
(org-babel-temp-file): replacement for make-temp-file with cleanup
on exit of Emacs
(org-babel-remove-temporary-directory): cleanup function run on exit
of Emacs
(kill-emacs-hook): now includes babel cleanup function
* lisp/ob-C.el (org-babel-C-execute): using org-babel-temp-file
instead of make-temp-file
* lisp/ob-R.el (org-babel-R-assign-elisp): using `org-babel-temp-file'
instead of `make-temp-file'
(org-babel-R-evaluate-external-process): using `org-babel-temp-file'
instead of `make-temp-file'
(org-babel-R-evaluate-session): using `org-babel-temp-file' instead of
`make-temp-file'
* lisp/ob-asymptote.el (org-babel-execute:asymptote): using
`org-babel-temp-file' instead of `make-temp-file'
* lisp/ob-clojure.el (org-babel-clojure-evaluate-external-process):
using `org-babel-temp-file' instead of `make-temp-file'
* lisp/ob-ditaa.el (org-babel-execute:ditaa): using
`org-babel-temp-file' instead of `make-temp-file'
* lisp/ob-dot.el (org-babel-execute:dot): using `org-babel-temp-file'
instead of `make-temp-file'
* lisp/ob-gnuplot.el (org-babel-gnuplot-process-vars): using
`org-babel-temp-file' instead of `make-temp-file'
(org-babel-execute:gnuplot): using `org-babel-temp-file' instead of
`make-temp-file'
* lisp/ob-haskell.el (org-babel-load-session:haskell): using
`org-babel-temp-file' instead of `make-temp-file'
(org-babel-haskell-export-to-lhs): using `org-babel-temp-file' instead
of `make-temp-file'
* lisp/ob-latex.el (org-babel-execute:latex): using
`org-babel-temp-file' instead of `make-temp-file'
* lisp/ob-ledger.el (org-babel-execute:ledger): using
`org-babel-temp-file' instead of `make-temp-file'
* lisp/ob-lisp.el (org-babel-execute:lisp): using
`org-babel-temp-file' instead of `make-temp-file'
* lisp/ob-octave.el (org-babel-octave-evaluate-external-process):
using `org-babel-temp-file' instead of `make-temp-file'
(org-babel-octave-evaluate-session): using `org-babel-temp-file'
instead of `make-temp-file'
(org-babel-octave-import-elisp-from-file): using `org-babel-temp-file'
instead of `make-temp-file'
* lisp/ob-perl.el (org-babel-perl-evaluate): using
`org-babel-temp-file' instead of `make-temp-file'
* lisp/ob-python.el (org-babel-python-evaluate): using
`org-babel-temp-file' instead of `make-temp-file'
using `org-babel-temp-file' instead of `make-temp-file'
* lisp/ob-ruby.el (org-babel-ruby-evaluate): using
`org-babel-temp-file' instead of `make-temp-file'
using `org-babel-temp-file' instead of `make-temp-file'
* lisp/ob-sass.el (org-babel-execute:sass): using
`org-babel-temp-file' instead of `make-temp-file'
* lisp/ob-sh.el (org-babel-sh-evaluate): using `org-babel-temp-file'
instead of `make-temp-file'
* lisp/ob-sql.el (org-babel-execute:sql): using `org-babel-temp-file'
instead of `make-temp-file'
* lisp/ob-sqlite.el (org-babel-execute:sqlite): using
`org-babel-temp-file' instead of `make-temp-file'
(org-babel-sqlite-expand-vars): using `org-babel-temp-file' instead of
`make-temp-file'
Attached is the patch which catch this error and throws meaningful
message.
* lisp/org-habit.el (org-habit-parse-todo): Find sr-days only if
scheduled-repeat is non nil. Use 4th element of the list returned
by (org-heading-components) as habit-entry. Modify the error
message to be more meaningful.
TINYCHANGE
paulusm <paulusm@bigpond.com> writes:
> Hi org-mode people,
>
> Whilst playing with the "shaving" example from
> http://orgmode.org/manual/Tracking-your-habits.html I accidentally put a
> bad character in the SCHEDULED timestamp.
>
> Instead of: "SCHEDULED: <2010-08-26 Thu .+2d/4d>"
> I had: "SCHEDULED: <2010-08-26 Thu .+2nd/4d>"
>
> When trying to view my agenda, I was presented with a blank agenda and Emacs
> very quietly reported:
> "org-habit-duration-to-days: Wrong type argument: stringp, nil"
> which is not really helpful.
>
> Removing the bad character fixes the issue, and I can duplicate the error
> condition as described above.
>
> Perhaps some better error trapping could be done?
>
>
* lisp/ob-latex.el (org-babel-execute:latex): adding new ":fit" and
":border" header arguments which both use the "preview" latex
package to fit the resulting pdf image to the figure.
(org-babel-latex-tex-to-pdf): updated to the latest code from
org-latex.el
Eric Schulte
David Maus
Carsten Dominik
Dan Davison
Manish Sharma
Christian Egli
Glenn Morris
Magnus Henoch
Zhang Weize
Aditya Siram
Nicolas Goaziou
Noorul Islam
Erik Iverson
Harri Kiiskinen