* ob-clojure.el (org-babel-execute:clojure): Don't use
`cider-current-ns' to set the current namespace.
Thanks to Volker Strobel for reporting this issue.
* lisp/org.el (org-open-at-point): White spaces after an object are
usually ignored by the function. Though, when point is right after
the object, still activate it.
* testing/lisp/test-org.el (test-org/custom-id): Fix test.
* lisp/org.el (org-open-at-point): On an unsupported object nested
within another object, try to open the parent object.
This should correctly open the following link, with point on the
verbatim object:
[[http://orgmode.org][=verbatim=]]
* lisp/org.el (org-open-at-point): Do not do anything when point is on
white spaces after an object.
* testing/lisp/test-org.el (test-org/custom-id): Modify test.
* lisp/ox-beamer.el (org-beamer-item): Insert the export snippet right
after the first \item, not all of them.
Thanks to Andreas Leha for reporting it.
* lisp/org-bibtex.el (org-bibtex-read): Check string length before
using aref.
If a field in a bibtex entry is empty:
@article(test,
description = "")
the function org-bibtex-read throws an exception because of
using aref on this empty string.
The solution is to check the length of the string before.
TINYCHANGE
Signed-off-by: Stefan-W. Hahn <stefan.hahn@s-hahn.de>
* lisp/org.el (org-open-at-point): Allow options when using
applications in links with options.
(org-open-file-with-system, org-open-file-with-emacs): Change
signature to be compatible with `org-open-file'
* lisp/org.el (org-open-at-point): Rewrite function using Element
parser.
(org-link-types): Add "help" type.
* testing/lisp/test-org-open-at-point.el: Remove file. Two tests are
not supported anymore (namely bracket-link-before and
plain-link-before) and the other tests are wrong (mixing id and
custom-id links).
* testing/examples/open-at-point.org: Remove file.
* testing/lisp/test-org.el (test-org/custom-id): Add test.
Unlike to the previous implementation, this one will only open links
under point or just before point, not links on the same line but
before point.
* lisp/org-element.el (org-element-context): If function is called at
the end of buffer, return any object that ends there.
* testing/lisp/test-org-element.el (test-org-element/context): Add
test.
* lisp/ox-latex.el (org-latex-custom-id-as-label): New variable.
(org-latex-headline): Optionally generate label keys based on
CUSTOM_ID, depending on value of :latex-custom-id-labels option
(org-latex-link): Optionally generate refs based on CUSTOM_ID,
depending on value of :latex-custom-id-labels option.
This change was discussed in the following thread:
http://thread.gmane.org/gmane.emacs.orgmode/82392
* lisp/org-element.el (org-element--parse-to): Fix cache parsing when
the next element to shift is at the contents beginning of its
parent. Refactor function.
* lisp/org-element.el (org-element-cache-sync-idle-time): Change
default value.
(org-element-cache-sync-duration, org-element-cache-sync-break,
org-element--cache-sync-requests, org-element--cache-sync-timer,
org-element--cache-sync-keys, org-element--cache-default-key,
org-element--cache-change-warning): New variables.
(org-element-cache-merge-changes-threshold,
org-element--cache-status): Removed variables.
(org-element--cache-key, org-element--cache-generate-key,
org-element--cache-key-less-p, org-element--cache-find,
org-element--cache-set-timer, org-element--cache-process-request,
org-element--cache-submit-request, org-element--parse-to,
org-element--cache-interrupt-p, org-element--cache-put,
org-element--cache-active-p): New functions.
(org-element--cache-compare): Adapt to new keys in AVL tree.
(org-element--cache-pending-changes-p,
org-element--cache-cancel-changes, org-element--cache-mapc,
org-element-cache-get, org-element-cache-put): Removed functions.
(org-element--cache-before-change): Use new variables.
(org-element--cache-after-change): Renamed from
`org-element--cache-record-change'.
(org-element-cache-get): Change signature.
(org-element-cache-put): Rewrite function. Use new tools.
(org-element-cache-reset): Adapt to new variables.
(org-element--cache-sync): Rewrite function.
* lisp/ox.el (org-export--generate-copy-script): Do not copy through
new cache-related variables.
(org-export-ignored-local-variables): New variable.
* testing/lisp/test-org-element.el (test-org-element/cache): New test.
Now only the part of the cache that needs to be accessed is updated
synchronously. Otherwise, it happens on idle time.
* lisp/org.el (org-link-escape-chars): Extend docstring.
(org-link-escape-chars-browser): Mention in docstring that it will
become a candidate for removal.
(org-link-escape-browser): Mention in docstring that it will become a
candidate for removal.
(org-open-at-point): Move `url-encode-url' and comments into
`org-link-escape-browser'.
* lisp/ox-html.el (org-html-link): Make use of
`org-link-escape-browser' like `org-open-at-point'.
* testing/lisp/test-org.el (test-org/org-link-escape-chars-browser):
Mention in docstring that it will become a candidate for removal.
* lisp/org-element.el (org-element-inlinetask-parser): Fix parsing
when regular and degenerate inlinetasks are mixed in the section.
* testing/lisp/test-org-element.el (test-org-element/inlinetask-parser):
Add tests.
Thanks to Anders Johansson for reporting it.
* org-colview.el (org-columns-display-here): Fix the column
view for numbers with a format specifier (e.g. {+; %5.1f}).
Thanks to OSiUX and Michael Brand for reporting this.
* lisp/ob-shell.el (org-babel-execute:shell): Pass the cmdline header
argument to `org-babel-sh-evaluate'.
(org-babel-sh-evaluate): Pass the cmdline header argument to
`call-process-shell-command'.
* org-src.el (org-edit-src-code): Throw a warning instead of
an error when loading the mode fails, otherwise the user is
left with unusable buffers.
Thanks to Florian Beck for suggesting this.
* lisp/org-element.el (org-element-normalize-contents): Do not ignore
empty lines when an object follows.
* testing/lisp/test-org-element.el (test-org-element/normalize-contents):
Add test.
* ob-core.el (org-babel-insert-result): Use `org-babel-examplify-region'.
(org-babel-capitalize-examplize-region-markers): Rename to
`org-babel-capitalize-example-region-markers'.
(org-babel-examplize-region): Mark obsolete and rename to
`org-babel-examplify-region'.
* lisp/org.el (org-toggle-fixed-width): New function.
* testing/lisp/test-org.el (test-org/toggle-fixed-with): New test.
This replaces the old implementation removed in commit
6a00c96541.
* org-table.el (org-table-copy-down)
(org-table-find-dataline, org-table-move-row)
(org-table-insert-hline, org-table-kill-row): Use
`org-move-to-column' with the IGNORE-INVISIBLE arg set to `t',
so that abbreviated rows don't interfer with setting the
cursor back at the correct position.
Thanks to Jason Lewis for reporting one of these bugs.
* lisp/org.el (org-hide-macro-markers): new option
(org-fontify-macros): new function
(org-set-font-lock-defaults): call `org-fontify-macros'
* doc/org.texi: Document user option `org-hide-macro-markers'
TINYCHANGE
* org-agenda.el (org-agenda-find-same-or-today-or-agenda): Use
`org-agenda-backward-block'.
(org-agenda-backward-block): Renamed and rewritten from
`org-agenda-goto-block-beginning'.
(org-agenda-forward-block): New command.
(org-agenda-mode-map): Remap `backward-paragraph' and
`forward-paragraph' to `org-agenda-backward-block' and
`org-agenda-forward-block' respectively.
Thanks to Bart Bunting for raising this.
* lisp/org-element.el (org-element-interpret-data): Do not remove
properties by side-effect when interpreting a string, as it also
removes them from the parse tree, making the string unusable without
its :parent property.
If text properties get in the way, it is also possible to use
`substring-no-properties' but then, a compatibility function would be
required for XEmacs.
* lisp/ob-exp.el (org-babel-exp-process-buffer): Also check
`org-src-preserve-indentation' to know when to preserve indentation.
* testing/lisp/test-ob-exp.el (ob-export/export-and-indentation): New
test.
Thanks to John Hendy for reporting it.
* ob-clojure.el (org-babel-execute:clojure): Use
`org-babel-result-cond' to create the correct output.
Thanks to Soapy Smith who reported this and to Eric Schulte for providing the fix.
* lisp/ob-exp.el (org-babel-exp-code-template): Include switches in
template.
(org-babel-exp-code): Provide %switches placeholder.
* testing/lisp/test-ob-exp.el (ob-export/export-src-block-with-switches):
New test.
(ob-export/export-src-block-with-flags): Fix indentation.
This fixes dde6af3a62. The confusion
came from the fact that "flags" placeholder had two meanings:
the :flags value and the block's switches (e.g., "-n"). This patch
separates these two meanings.
* lisp/org-element.el (org-element-quote-section-parser,
org-element-quote-section-interpreter): Remove functions.
(org-element--current-element, org-element--parse-elements): Do not
handle quote sections at all.
* testing/lisp/test-org-element.el (test-org-element/quote-section-parser):
Remove test.
* lisp/ob-R.el (org-babel-expand-body:R): Added the opening of the
tryCatch() wrapper
* lisp/ob-R.el (org-babel-R-construct-graphics-device-call): Added
closing of the wrapper containing the error function.
Added tryCatch() wrapper around the execution of the source block so
that if an error occurs
- the R graphic device is closed even when an error occurs
- a graph containing the error message is created
- the error message is printed in the R session in the form
ERROR : the error message
TINYCHANGE
* lisp/ox-latex.el (org-latex-plain-list): Do not automatically
enclose value for :options attribute within square brackets.
Instead, append them verbatim next to the block name, as special
blocks do.
* doc/org.texi (@LaTeX{} specific attributes): Update manual.
* lisp/ob-ref.el (org-babel-ref-parse): If
`org-babel-current-src-block-location' is a marker, it can be from
another buffer, use marker-position instead in this case.
Introduced with r114064 on Emacs trunk. Not sure if this is a bug in
Org or Emacs, but the patch restores the previous behaviour.
* lisp/ox-beamer.el: Be more cautious about the order in which options
are defined, at this order will be the same when creating an export
template (see `org-export-insert-default-template').
* lisp/ox-html.el: Ditto.
* lisp/ox-latex.el: Ditto.
* lisp/ox.el: Ditto.
* lisp/ox.el (org-export-insert-default-template): Do not hard-code
alphabetical order for keywords in templates. Instead, follow order
specified in back-ends or `org-export-options-alist' for the default
case.
* org-compat.el (org-set-transient-map): Alias pointing at
`set-transient-map' if defined, at `set-temporary-overlay-map'
otherwise.
Thanks to Eric Abrahamsen for reporting this.
* lisp/org-element.el (org-element--cache-mapc): New function.
(org-element--cache-sync): Use new function.
`avl-tree-mapc' exists in Emacs 24's "avl-tree" but not in Emacs
23's. The new function implements it.
* org-agenda.el (org-agenda-next-item)
(org-agenda-previous-item, org-agenda-toggle-archive-tag)
(org-agenda-todo, org-agenda-priority, org-agenda-clock-in)
(org-agenda-clock-out): Put the cursor back on the correct
column, when possible.
(org-agenda-todo): When `org-clock-out-when-done' is `t', also
remove the current clock overlay.
* lisp/org-element.el (org-element--cache-sync): Call
`avl-tree-delete' with 2 arguments only as a 4-arguments call is
only compatible with Emacs 24.1 and later.
* org.el (org-provide-todo-statistics): Allow to set to a list
of two lists, one with TODO keywords, the other one with DONE
keywords.
(org-update-parent-todo-statistics): Correctly handle
`org-provide-todo-statistics' when it is set as a list of two
lists, for TODO and DONE keywords.
Thanks to Fletcher Charest for reporting this and requesting
this feature.
* org.el (org-insert-all-links): New parameters `pre' and
`post' to specify a string to preprend and append.
(org-insert-last-stored-link): New command.
(org-mode-map): Bind the new command to `C-c M-l'.
Thanks to Sébastien Vauban for requesting this and to Nick
Dokos for testing and fixing the patch.
* lisp/ob-exp.el (org-babel-exp-code): Fix export of src blocks with
flags.
* testing/lisp/test-ob-exp.el (ob-export/export-src-block-with-flags):
New test.
Thanks to Giuseppe Lipari for reporting it.
* org.el (org-outline-overlay-data): Set the insertion-type of end
bound marker of the function to t (means marker advances when you
insert text at it)
This is to conserve outline visibility property when changes are made
at the end bound of the data.
For example: try `org-babel-execute-subtree' on a folded outline:
The new result will be shown after the folded part of the outline
whereas the outline body should not be visible.
TINYCHANGE
* ox.el (org-export--get-subtree-options): When using the
headline as a title for a subtree export, only take the true
heading, no TODO keyword, no priority cookie, no tag.
Thanks to Robert Klein for reporting this.
* lisp/org-element.el (org-element-at-point): Do not call
`outline-next-heading' when an element at top level contains point.
This is particularly important when the current section ends way
after the point.
* lisp/ob-core.el (org-babel-current-result-hash): Additional info
argument so that named call line results may be found.
(org-babel-set-current-result-hash): Additional info argument so
that named call line results may be found.
* lisp/ob-lob.el (org-babel-lob-execute): Passing info to hash finding
functions so that named results may be found.
* lisp/ob-exp.el (org-babel-exp-process-buffer): Make processing more
robust when results are inserted before source block or when source
block is followed by multiple blank lines.
* testing/lisp/test-ob-exp.el (ob-export/export-with-results-before-block):
Add test.
* lisp/ox.el (org-export-insert-default-template): Only insert
keywords and options relatives to the selected back-end. Ignore
those relatives to its parent in the case of a derived back-end.
* lisp/ox-ascii.el (org-ascii--current-text-width): Convert `length'
to `string-width'.
(org-ascii--build-title, org-ascii--build-toc)
(org-ascii--list-listings, org-ascii--list-tables)
(org-ascii-template--document-title)
(org-ascii-inner-template, org-ascii-format-inlinetask-default)
(org-ascii-format-inlinetask-default, org-ascii-item
(org-ascii--table-cell-width, org-ascii-table-cell)
(org-ascii--current-text-width): Likewise.
I've checked all occurrences of the function `length' in ox-ascii.el.
It turns out that the most of them are calculating the width of given
string. To support fullwidth characters, we better use `string-width'
instead of `length'.
Some characters in UCS are categorized as "East Asian Ambiguous"[1].
The return value of `string-width' with those characters depends on
how Emacs is setup. We leave those ambiguous character handling to
Emacs.
Two usages of `length' in `ox-ascii.el' were left as-is, because those
were used for:
- bullet depth calculation in `org-ascii-headline', and
- cell position calculation in `org-ascii--table-cell-width'.
[1]: http://www.unicode.org/reports/tr11/#Ambiguous
* lisp/ox-latex.el (org-latex-headline, org-latex-item): Fix items
starting with a square bracket.
Thanks to Jon Degenhardt, Vladimir Lomov and Eric S Fraga for
contributing to the discussion.
* org.el (org-demote): Ignore invisible text when aligning
tags.
(org-set-tags): When JUST-ALIGN is 'ignore-column, ignore
invisible text when restoring the cursor to the correct
column.
This fixes a bug about demoting hidden headlines.
If org-move-to-column temporarily ignore visibility
specs, this will prevent org-demote to work correctly
in hidden regions.
Thanks to Susan Cragin for reporting this bug.
* lisp/org-table.el (org-table-remote-reference-indirection): Change
the local variable START to a value that will be still valid after
`replace-match'.
* lisp/org.el (org-toggle-item): Do not call `org-list-struct' twice
and fix checkboxes after modifying one of them.
This patch is relative to 213c2a6aa0.
* ob-python.el (org-babel-python-var-to-python): Bugfix: Strip
properties before formatting the results.
Thanks to Daniel Gerber for reporting this and providing a fix,
and to others who contributed.
* org-agenda.el (org-agenda-regexp-filter-preset): Fix
typo in docstring.
(org-agenda-reapply-filters): New function.
(org-agenda-drag-line-forward): Rewrite to fix a bug when used
in filtered agendas.
(org-agenda-drag-line-backward): Rewrite using
`org-agenda-drag-line-forward'.
Thanks to Thomas Morgan for reporting this.
* lisp/org-table.el (org-table-remote-reference-indirection): Use the
optional arg START of `string-match' to improve performance and to
avoid endless loop on user error.
* doc/org.texi (References): Add description for indirection of
NAME-OR-ID.
* lisp/org-table.el (org-table-eval-formula): Make use of
`org-table-remote-reference-indirection'.
(org-table-remote-reference-indirection): New function.
* testing/lisp/test-org-table.el
(test-org-table/remote-reference-indirect): Change to use remote
reference indirection.
* lisp/org.el (org-match-substring-regexp): Simplify syntax when not
using braces. Also make the variable a defconst.
(org-match-substring-with-braces-regexp): Make the variable a defconst
and remove a useless group in regexp.
* lisp/org-element.el (org-element-subscript-parser,
org-element-superscript-parser): Adapt to group changes.
* lisp/org-element.el (org-element--cache-root): New function.
(org-element--cache-sync, org-element-cache-get): Use new function.
This is a workaround for `avl-tree--root' bug before Emacs 24. Thanks
to Daniel Clemente for reporting it.
* lisp/org.el (org-get-previous-line-level): Do not call
`org-current-level' twice unless necessary. Also, avoid using
`line-number-at-pos' when the information needed is to know if point
is in the first line of the visible part of the buffer.
* lisp/ox-html.el (org-html-checkbox-types): Fix docstring.
(org-html-checkbox-type): Use symbols instead of strings. It avoids
to rely on `intern' later on. Modify docstring so its first line
contains only a complete sentence.
(org-html-checkbox): Use `assq' instead of `assoc'.
This fixes 2c782da801.
(org-html-checkbox-types): New constant. Contains unicode, ascii and html
checkbox alists.
(org_html_checkbox_type): New customzation variable can be set to one
of the above choices. Defaults to "ascii"
(org-html-checkbox): Use the appropriate set of checkboxes as
specified in `org-html-checkbox-type'.
* org-entities.el (org-entities-help): Prevent the display of
pretty entities, as this help buffer is meant to list literal
strings, not utf-8 representations.
Thanks to Brice Waegenire for reporting this.
* lisp/ox-beamer.el (org-beamer-select-environment): Function doesn't
work if fast tag selection is disabled, so make sure it is always
on, independently on user's configuration.
Reported-by: Anders Johansson <mejlaandersj@gmail.com>
* lisp/org-element.el (org-element-at-point, org-element-cache-get,
org-element-cache-put, org-element--cache-sync): Complete rewrite to
use new data structure.
(org-element-context, org-element-cache-reset): Slight change in order
to use new tools to access cached data.
(org-element-cache-merge-changes-threshold): Renamed from
`org-element--cache-merge-changes-threshold'.
(org-element-cache-sync-idle-time): Renamed from
`org-element--cache-sync-idle-time'.
(org-element--cache-objects): New variable.
Now elements are stored in AVL tree and objects in a hash table. Also
moved functions relative to cache into a specific section of the file.
* lisp/ox.el (org-export-with-fixed-width, org-export-with-tables):
Change docstring to reflect new meaning.
(org-export--skip-p): Completely ignore tables and fixed-width areas
if appropriate option is nil.
* testing/lisp/test-ox.el (test-org-export/handle-options): Add tests.