* testing/lisp/test-ob-R.el (featurep): Signal missing dependencies
with an error rather than a throw.
* testing/org-test.el (missing-test-dependency): Define the error
signal for missing dependencies.
(org-test-for-executable): Signal missing dependencies with an error
rather than a throw.
(org-test-load): Define an expected failing test for each file with
missing dependencies.
* testing/lisp/test-ob.el (test-org-babel/nested-code-block):
Evaluation of a nested block.
(test-org-babel/partial-nested-code-block): Evaluation of a
partially nested block.
* lisp/ob-exp.el (org-babel-in-example-or-verbatim): Some valid
execution contexts (e.g., call lines) look like commented lines.
* lisp/ob.el (org-babel-get-src-block-info): Empty match string
doesn't count.
(org-babel-process-params): Always process parameters, even if you
don't to table splitting.
* testing/lisp/test-ob-C.el (ob-C/table): Ignore failures for this C
test.
* testing/lisp/test-ob-fortran.el (ob-fortran/input-var): Ignore
failures for this fortran test.
This results in the following behavior.
#+property: var foo=1
#+property: var+ bar=2
#+begin_src emacs-lisp
(+ foo bar)
#+end_src
#+results:
: 3
#+begin_src emacs-lisp
(org-entry-get (point) "var" t)
#+end_src
#+results:
: foo=1 bar=2
* overwriting a file-wide property
:PROPERTIES:
:var: foo=7
:END:
#+begin_src emacs-lisp
foo
#+end_src
#+results:
: 7
#+begin_src emacs-lisp
(org-entry-get (point) "var" t)
#+end_src
#+results:
: foo=7
* appending to a file-wide property
:PROPERTIES:
:var+: baz=3
:END:
#+begin_src emacs-lisp
(+ foo bar baz)
#+end_src
#+results:
: 6
#+begin_src emacs-lisp
(org-entry-get (point) "var" t)
#+end_src
#+results:
: foo=1 bar=2 baz=3
* lisp/org.el (org-update-property-plist): Updates a given property
list with a property name and a property value.
(org-set-regexps-and-options): Use org-update-property-plist.
(org-entry-get): Use org-update-property-plist.
* testing/examples/property-inheritance.org: Example file for testing
appending property behavior.
* testing/lisp/test-property-inheritance.el: Tests of appending
property behavior.
* lisp/ob.el (org-babel-balanced-split): Allow splitting on single
characters as well as groups of two characters.
(org-babel-parse-multiple-vars): Split variables on single spaces.
Nick Dokos <nicholas.dokos@hp.com> writes:
> Eric Schulte <schulte.eric@gmail.com> wrote:
>
>> The attached updated patch fixes a bug in the original.
>>
>
> Minor problem in applying:
>
> ,----
> | $ git apply ~/Mail/inbox/724
> | /home/nick/Mail/inbox/724:671: trailing whitespace.
> | #+name:
> | /home/nick/Mail/inbox/724:599: new blank line at EOF.
> | +
> | warning: 2 lines add whitespace errors.
> `----
The attached version fixes these issues, Thanks -- Eric
>From 0e43d59ee8d46a63f86780a502de726271bc39de Mon Sep 17 00:00:00 2001
From: Eric Schulte <schulte.eric@gmail.com>
Date: Fri, 28 Oct 2011 10:44:21 -0600
Subject: [PATCH] removing code block, results and call-line synonyms -- BREAKING CHANGE
Following a round of on-list discussion many code block synonyms have
been removed, moving forward the following syntax is valid.
- call lines are specified with #+call:
- code blocks are named with #+name:
- results are named with #+name:, however results generated by a code
block may still be labeled with #+results:, and tables named with
#+tblname: will be considered to be named results
The following function may be used to update an existing Org-mode
buffer to the new syntax.
(defun update-org-buffer ()
"Update an Org-mode buffer to the new data, code block and call line syntax."
(interactive)
(save-excursion
(flet ((to-re (lst) (concat "^[ \t]*#\\+" (regexp-opt lst t)
"\\(\\[\\([[:alnum:]]+\\)\\]\\)?\\:[ \t]*"))
(update (re new)
(goto-char (point-min))
(while (re-search-forward re nil t)
(replace-match new nil nil nil 1))))
(let ((old-re (to-re '("RESULTS" "DATA" "SRCNAME" "SOURCE")))
(lob-re (to-re '("LOB")))
(case-fold-search t))
(update old-re "name")
(update lob-re "call")))))
Note: If an old version of Org-mode (e.g., the one shipped with Emacs)
is installed on your system many of the important variables will
be pre-defined with a defvar and *will not* have their values
automatically updated, these include the following.
- org-babel-data-names
- org-babel-result-regexp
- org-babel-src-block-regexp
- org-babel-src-name-regexp
- org-babel-src-name-w-name-regexp
It may be necessary to either remove the source code of older
versions of Org-mode, or to explicitly evaluate the ob.el file.
* lisp/ob-exp.el (org-exp-res/src-name-cleanup): Updated
Documentation.
* lisp/ob-lob.el (org-babel-block-lob-one-liner-regexp): Updated
regular expression.
(org-babel-inline-lob-one-liner-regexp): Updated regular expression.
* lisp/ob-ref.el (org-babel-ref-resolve): Notice when something that
looks like a data results may actually be a code block.
* lisp/ob-table.el: Updated documentation.
* lisp/ob.el (org-babel-src-name-regexp): Simplified regexp.
(org-babel-get-src-block-info): Updated match strings.
(org-babel-data-names): Simplified acceptable names.
(org-babel-find-named-block): Indentation.
(org-babel-find-named-result): Updated to not return a code block as
a result.
* lisp/org.el (org-fontify-meta-lines-and-blocks-1): Removing
references to old syntactic elements.
(org-additional-option-like-keywords): Removing references to old
syntactic elements.
* contrib/babel/library-of-babel.org: Updated to make use of the new
syntax.
* testing/examples/babel-dangerous.org: Updated to make use of the new
syntax.
* testing/examples/babel.org: Updated to make use of the new syntax.
* testing/examples/ob-awk-test.org: Updated to make use of the new
syntax.
* testing/examples/ob-fortran-test.org: Updated to make use of the new
syntax.
* testing/lisp/test-ob.el: Removed two bad tests which tested the
literal values of old regular expressions rather than their
behavior.
* lisp/org.el (org-try-cdlatex-tab): Don't try to expand a LaTeX
environment when at an item or an headline, but allow LaTeX
fragments.
(org-cycle): Try to call `cdlatex-tab' before cycling item's or
headline's visibility, in order to catch LaTeX fragments within.
This patch is based on the report and work of Maik Beckmann.
* contrib/lisp/org-lparse.el (org-lparse-format-org-link): Fix
issues with formatting of custom links - pass the right
backend to the custom formatter.
Fix for bug reported by Christian Moe here:
http://lists.gnu.org/archive/html/emacs-orgmode/2011-11/msg00474.html
TODO: Modify `org-bbdb-export' to support odt backend. Review contrib
modules for odt compatibility.
* contrib/lisp/org-xhtml.el (org-xhtml-begin-environment)
(org-xhtml-end-environment): Fix param list.
Continue commit 2e0e462d14.
Support for annotation blocks for xhtml backend still needs to
be ported. See org-exp-blocks.el for more information.
* lisp/ob-lob.el (org-babel-map-call-lines): Allow mapping of code
over all call lines in a buffer.
* lisp/ob.el (org-babel-execute-buffer): Execute call lines when
executing an entire buffer.
* lisp/org-clock.el (org-clock-in):
(org-clock-find-position): Make space after date optional.
* lisp/org.el (org-set-regexps-and-options):
(org-ts-regexp):
(org-ts-regexp-both):
(org-ts-regexp1):
(org-ctrl-c-ctrl-c): Make `C-c C-c' on date fix the time stamp
* doc/org.texi (Creating timestamps): Document the effect of `C-c C-c'
on a timestamp.
* lisp/ob-lob.el (org-babel-lob-execute-maybe): Don't execute a call
inside a verbatim block.
* lisp/ob-exp.el (org-babel-in-example-or-verbatim): Check for example
blocks.
Please consider a patch to construct a table from the output of maxima
code block.
>From a0305117f4e793c93d7d10bc7aab04f96bd62e9c Mon Sep 17 00:00:00 2001
From: Litvinov Sergey <slitvinov@gmail.com>
Date: Sat, 1 Oct 2011 22:29:18 +0200
Subject: [PATCH] [ob-maxima] Construct a table from the output of the code block. Add
ert tests.
The first patch maps cpp language code to c++-mode. The second patch
adds tests for ob-C.
>From fba6eef6944766e675e4abe1d11d347b9a728031 Mon Sep 17 00:00:00 2001
From: Sergey Litvinov <slitvinov@gmail.com>
Date: Wed, 3 Aug 2011 22:03:19 +0200
Subject: [PATCH 2/2] Add tests for ob-C.el
Thanks to Sergey Litvinov for contributing this language support!
* lisp/ob-fortran.el: Adding support for Fortran code blocks.
* Makefile (LISPF): Compile Fortran support.
* lisp/org.el (org-babel-load-languages): Adding fortran to this list.
* contrib/lisp/org-odt.el (org-odt-is-formula-link-p):
Recognize *.mml and *.mathml as mathml files. Recognize *.odf
files as OpenDocument formula file.
(org-odt-copy-formula-file): Use `org-odt-zip-extract-one' to
handle ODF formula files.
(org-export-odt-format-formula): If a ODF formula link has no
caption or label, embed it inline. Otherwise embed it as
displayed.
* contrib/lisp/org-odt.el (org-odt-update-styles-file)
(org-odt-write-mimetype-file): New. Extracted out of
`org-odt-save-as-outfile'.
(org-odt-save-as-outfile): Use above routines.
(org-export-odt-tmpdir-prefix)
(org-odt-init-outfile): Misc changes.
Preparing for introducing `org-export-as-odf'. The new
command will create OpenDocument Formula files out of LaTeX
fragments. Dynamic variable `org-lparse-backend' will be set
to 'odf during this command.
* contrib/lisp/org-odt.el (org-odt-encode-plain-text): New.
(org-odt-format-line)
(org-odt-format-source-code-or-example-plain): Use it.
(org-odt-format-object-description): New. Format svg:title
and svg:desc elements out of plain text.
(org-export-odt-format-formula, org-export-odt-format-image):
Check whether the incoming formula or image is generated out
of a latex fragment. If yes, pass the latex fragment for
downstream processing.
(org-odt-format-frame): Check if the object that is enclosed
in the frame has metadata associated with it. If yes, dump it
as part of svg:title and svg:desc elements.
(org-odt-protect-latex-fragment): New after advice for
`org-format-latex-as-mathml'. Fixes the following bug
http://lists.gnu.org/archive/html/emacs-orgmode/2011-11/msg00176.html
* lisp/org-footnote.el (org-footnote-new): Cannot insert an inline
footnote at beginning of line anymore.
(org-footnote-at-reference-p): Don't recognize inline footnotes at
beginning of line.
It is technically possible to allow inline footnotes at beginning of
line, their syntax being different enough from standard references.
Though, after normalizing them, they will become standard footnotes
still at beginning of line, which will break them.
* lisp/org.el (org-set-font-lock-defaults): Fix small error in
matching group that prevented fontification of keywords like
org-comment-string and stars in headlines.
* lisp/org.el (org-heading-regexp, org-heading-keyword-regexp-format,
org-heading-keyword-maybe-regexp-format): Globalize variables so
they are accessible even in buffers not in Org mode.
* contrib/lisp/org-odt.el
(org-odt-format-source-line-with-line-number-and-label): When
numbering was turned off, src blocks were getting stripped
from export. Fixed this regression.
Tom Dye
Eric Schulte
Martyn Jago
Carsten Dominik
Nicolas Goaziou
Jambunathan K
Jason Dunsmore
Litvinov Sergey
Suvayu Ali
David Maus