* lisp/ob-lob.el (org-babel-lob-execute): Do not use defun subseq from
cl at runtime. Replace concatenation of sub-sequences by splicing
the modified params list into a copy of info (pre-must info be
preserved).
* lisp/ob-core.el (org-babel-current-result-hash): Additional info
argument so that named call line results may be found.
(org-babel-set-current-result-hash): Additional info argument so
that named call line results may be found.
* lisp/ob-lob.el (org-babel-lob-execute): Passing info to hash finding
functions so that named results may be found.
* lisp/ob-core.el (org-babel-find-named-result): Call lines are not
results.
(org-babel-where-is-src-block-result): Don't implicitly name the
results of call lines.
* lisp/ob-exp.el (org-babel-exp-non-block-elements): There is now
another element on the call line info list.
* lisp/ob-lob.el (org-babel-lob-get-info): Return the name (if any)
at the end of the info list.
(org-babel-lob-execute): Pass the name through to execution.
The `org-babel-params-from-properties' command was calling
`org-babel-merge-params', the output of which was then being fed back
to another call to `org-babel-merge-params'. The merge params
function is not designed to allow this form of recursive calling, and
as a result many variables were being set to empty values.
The first noticed side effect of this bug was the breakage of the
org-babel-load-file command, which relies on default header
arguments (namely :tangle), which were overwritten by the bug above.
The fix involved having the `org-babel-params-from-properties'
function return a list of alists, which may then all be handed to the
top-level merge-params call.
* lisp/ob-core.el (org-babel-params-from-properties): Now returns a list
of alists and does *not* call `org-babel-merge-params'.
(org-babel-parse-src-block-match): Handle new list of lists output of
`org-babel-params-from-properties'.
(org-babel-parse-inline-src-block-match): Handle new list of lists
output of `org-babel-params-from-properties'.
* lisp/ob-exp.el (org-babel-exp-src-block): Handle new list of lists
output of `org-babel-params-from-properties'.
(org-babel-exp-non-block-elements): Handle new list of lists output of
`org-babel-params-from-properties'.
* lisp/ob-lob.el (org-babel-lob-execute): Handle new list of lists
output of `org-babel-params-from-properties'.
* lisp/ob-exp.el (org-babel-exp-results): Suppress user confirmation
of the emacs-lisp wrapper execution around a lob call.
* lisp/ob-lob.el (org-babel-lob-execute): Suppress user confirmation
of the emacs-lisp wrapper execution around a lob call.
Because in actuality the call line expands to an Emacs Lisp code
block.
* lisp/ob-lob.el (org-babel-lob-execute): Include default elisp header
args in call lines.
This patch ensure Org-mode will build on all supported versions of
Emacs, after the renaming of the cl macros behind the cl- prefix in the
recent Emacs trunk.
* lisp/org-compat.el (org-flet): Compatibility function now that flet
has been removed from cl-macs.
(org-labels): Compatibility function now that labels has been removed
from cl-macs.
* lisp/ob-R.el (org-compat): Require org-compat.
* lisp/ob-comint.el: Require org-compat.
* lisp/ob-exp.el (org-babel-exp-do-export): Switch to compatibility
function.
* lisp/ob-gnuplot.el (org-babel-expand-body:gnuplot): Switch to
compatibility function.
* lisp/ob-lob.el (org-babel-lob-get-info): Switch to compatibility
function.
(org-babel-lob-execute): Switch to compatibility function.
* lisp/ob-python.el (org-babel-python-evaluate-session): Switch to
compatibility function.
* lisp/ob-ref.el (org-babel-ref-index-list): Switch to compatibility
function.
* lisp/ob-sh.el (org-babel-sh-var-to-string): Switch to compatibility
function.
* lisp/ob-tangle.el (org-babel-load-file): Switch to compatibility
function.
(org-babel-tangle): Switch to compatibility function.
(org-babel-spec-to-string): Switch to compatibility function.
* lisp/ob.el (org-babel-view-src-block-info): Switch to compatibility
function.
(org-babel-execute-src-block): Switch to compatibility function.
(org-babel-edit-distance): Switch to compatibility function.
(org-babel-switch-to-session-with-code): Switch to compatibility
function.
(org-babel-sha1-hash): Switch to compatibility function.
(org-babel-balanced-split): Switch to compatibility function.
(org-babel-join-splits-near-ch): Switch to compatibility function.
(org-babel-get-rownames): Switch to compatibility function.
(org-babel-format-result): Switch to compatibility function.
(org-babel-insert-result): Switch to compatibility function.
(org-babel-examplize-region): Switch to compatibility function.
(org-babel-merge-params): Switch to compatibility function.
(org-babel-noweb-p): Switch to compatibility function.
(org-babel-expand-noweb-references): Switch to compatibility function.
* lisp/org-bibtex.el (org-bibtex-headline): Switch to compatibility
function.
(org-bibtex-fleshout): Switch to compatibility function.
(org-bibtex-read): Switch to compatibility function.
(org-bibtex-write): Switch to compatibility function.
* lisp/org-exp-blocks.el (org-export-blocks-preprocess): Switch to
compatibility function.
* lisp/org-exp.el (org-export-format-source-code-or-example): Switch to
compatibility function.
* lisp/org-macs.el (org-called-interactively-p): Indentation fix.
* lisp/org-mouse.el (org-mouse-timestamp-today): Switch to compatibility
function.
(org-mouse-set-priority): Switch to compatibility function.
(org-mouse-popup-global-menu): Switch to compatibility function.
(org-mouse-context-menu): Switch to compatibility function.
* lisp/org-plot.el (org-plot/gnuplot-to-grid-data): Switch to
compatibility function.
(org-plot/gnuplot-script): Switch to compatibility function.
* lisp/org.el (org-entry-get): Switch to compatibility function.
(org-fill-paragraph): Switch to compatibility function.
(org-auto-fill-function): Switch to compatibility function.
* lisp/ob.el (org-babel-set-current-result-hash): Change the hash of the
results for the current code block.
(org-babel-current-result-hash): Fix documentation.
* lisp/ob-lob.el (org-babel-lob-execute): Don't re-execute the called
function if the current call line hash matches that in its results.
I started from the 78ec8e commit then cherry-picked and squashed
commits that have been done in master since then, except the bad
commits that overwrote the tree (in master) with the tree in maint.
This commit also bumps the version number to 7.8.06.
The only "fix" that was made between 78ec8e and the previous commit
is e0072f which has been reported to break stuff.
This fixes a wrong merge that should not have happened:
commit 7e903a merges the master branch into the maint branch,
while we really want to keep the maint branch a bugfix-only
branch.
This commit reverts back the maint branch to its state before
merging the master branch. From there, we will fix remaining
problems with the maint branch (e.g. copyright issues) then
release this maint branch as Org-mode 7.8.05.
Nick Dokos <nicholas.dokos@hp.com> writes:
> Eric Schulte <schulte.eric@gmail.com> wrote:
>
>> The attached updated patch fixes a bug in the original.
>>
>
> Minor problem in applying:
>
> ,----
> | $ git apply ~/Mail/inbox/724
> | /home/nick/Mail/inbox/724:671: trailing whitespace.
> | #+name:
> | /home/nick/Mail/inbox/724:599: new blank line at EOF.
> | +
> | warning: 2 lines add whitespace errors.
> `----
The attached version fixes these issues, Thanks -- Eric
>From 0e43d59ee8d46a63f86780a502de726271bc39de Mon Sep 17 00:00:00 2001
From: Eric Schulte <schulte.eric@gmail.com>
Date: Fri, 28 Oct 2011 10:44:21 -0600
Subject: [PATCH] removing code block, results and call-line synonyms -- BREAKING CHANGE
Following a round of on-list discussion many code block synonyms have
been removed, moving forward the following syntax is valid.
- call lines are specified with #+call:
- code blocks are named with #+name:
- results are named with #+name:, however results generated by a code
block may still be labeled with #+results:, and tables named with
#+tblname: will be considered to be named results
The following function may be used to update an existing Org-mode
buffer to the new syntax.
(defun update-org-buffer ()
"Update an Org-mode buffer to the new data, code block and call line syntax."
(interactive)
(save-excursion
(flet ((to-re (lst) (concat "^[ \t]*#\\+" (regexp-opt lst t)
"\\(\\[\\([[:alnum:]]+\\)\\]\\)?\\:[ \t]*"))
(update (re new)
(goto-char (point-min))
(while (re-search-forward re nil t)
(replace-match new nil nil nil 1))))
(let ((old-re (to-re '("RESULTS" "DATA" "SRCNAME" "SOURCE")))
(lob-re (to-re '("LOB")))
(case-fold-search t))
(update old-re "name")
(update lob-re "call")))))
Note: If an old version of Org-mode (e.g., the one shipped with Emacs)
is installed on your system many of the important variables will
be pre-defined with a defvar and *will not* have their values
automatically updated, these include the following.
- org-babel-data-names
- org-babel-result-regexp
- org-babel-src-block-regexp
- org-babel-src-name-regexp
- org-babel-src-name-w-name-regexp
It may be necessary to either remove the source code of older
versions of Org-mode, or to explicitly evaluate the ob.el file.
* lisp/ob-exp.el (org-exp-res/src-name-cleanup): Updated
Documentation.
* lisp/ob-lob.el (org-babel-block-lob-one-liner-regexp): Updated
regular expression.
(org-babel-inline-lob-one-liner-regexp): Updated regular expression.
* lisp/ob-ref.el (org-babel-ref-resolve): Notice when something that
looks like a data results may actually be a code block.
* lisp/ob-table.el: Updated documentation.
* lisp/ob.el (org-babel-src-name-regexp): Simplified regexp.
(org-babel-get-src-block-info): Updated match strings.
(org-babel-data-names): Simplified acceptable names.
(org-babel-find-named-block): Indentation.
(org-babel-find-named-result): Updated to not return a code block as
a result.
* lisp/org.el (org-fontify-meta-lines-and-blocks-1): Removing
references to old syntactic elements.
(org-additional-option-like-keywords): Removing references to old
syntactic elements.
* contrib/babel/library-of-babel.org: Updated to make use of the new
syntax.
* testing/examples/babel-dangerous.org: Updated to make use of the new
syntax.
* testing/examples/babel.org: Updated to make use of the new syntax.
* testing/examples/ob-awk-test.org: Updated to make use of the new
syntax.
* testing/examples/ob-fortran-test.org: Updated to make use of the new
syntax.
* testing/lisp/test-ob.el: Removed two bad tests which tested the
literal values of old regular expressions rather than their
behavior.
Achim Gratz
Eric Schulte
Bastien Guerry
Carsten Dominik
Eric Schulte