* lisp/ob-keys.el (org-babel-key-bindings): Bound to C-c C-v k.
* lisp/ob.el (org-babel-map-regexp): New generic mapping macro.
(org-babel-map-inline-src-blocks): Rewritten to use new macro.
(org-babel-kill-results): Remove some or all results in the current
file.
* lisp/ob-lob.el (org-babel-map-call-lines): Map over all lob call
lines in the current file.
* doc/orgcard.tex: Document new keybinding.
* lisp/ob.el (org-babel-view-src-block-info): New function to inspect code blocks.
* lisp/ob-keys.el (org-babel-key-bindings): Key bindings for org-babel-view-src-block-info.
* doc/orgcard.tex: Documentation of new Babel function.
* lisp/ob-exp.el (org-babel-exp-results): Resolve hashes in the
current (not original) file buffer.
* lisp/ob.el (org-babel-current-result-hash): More informative name,
and remove useless optional argument.
* ob.el (org-babel-strip-protective-commas): Return `nil'
instead of an error if no argument is given.
(org-babel-parse-src-block-match): Make sure body is defined
in the let construct.
* lisp/ob-awk.el (org-babel-execute:awk): Use "verbatim" as synonym
for "scalar".
* lisp/ob-sh.el (org-babel-sh-evaluate): Use "verbatim" as synonym for
"scalar".
* lisp/ob-sqlite.el (org-babel-execute:sqlite): Use "verbatim" as
synonym for "scalar".
* lisp/ob.el (org-babel-merge-params): Use "verbatim" as synonym for
"scalar".
* lisp/ob.el (org-babel-sha1-hash): Adding optional argument KIND to
all org-called-interactively-p function invocations.
* lisp/org-agenda.el (org-agenda-redo): Adding optional argument KIND to
all org-called-interactively-p function invocations.
(org-agenda-show-1): Adding optional argument KIND to all
org-called-interactively-p function invocations.
(org-agenda-set-tags): Adding optional argument KIND to all
org-called-interactively-p function invocations.
* lisp/org-ascii.el (org-export-as-latin1): Adding optional argument
KIND to all org-called-interactively-p function invocations.
(org-export-as-latin1-to-buffer): Adding optional argument KIND to
all org-called-interactively-p function invocations.
(org-export-as-utf8-to-buffer): Adding optional argument KIND to all
org-called-interactively-p function invocations.
(org-export-region-as-ascii): Adding optional argument KIND to all
org-called-interactively-p function invocations.
* lisp/org-docbook.el (org-export-region-as-docbook): Adding optional
argument KIND to all org-called-interactively-p function
invocations.
* lisp/org-html.el (org-export-region-as-html): Adding optional
argument KIND to all org-called-interactively-p function
invocations.
* lisp/org-latex.el (org-export-region-as-latex): Adding optional
argument KIND to all org-called-interactively-p function
invocations.
* lisp/org-table.el (org-table-blank-field): Adding optional argument
KIND to all org-called-interactively-p function invocations.
(org-table-current-column): Adding optional argument KIND to all
org-called-interactively-p function invocations.
(org-table-current-dline): Adding optional argument KIND to all
org-called-interactively-p function invocations.
(org-table-sort-lines): Adding optional argument KIND to all
org-called-interactively-p function invocations.
(org-table-sum): Adding optional argument KIND to all
org-called-interactively-p function invocations.
(org-table-rotate-recalc-marks): Adding optional argument KIND to
all org-called-interactively-p function invocations.
(org-table-eval-formula): Adding optional argument KIND to all
org-called-interactively-p function invocations.
(orgtbl-send-table): Adding optional argument KIND to all
org-called-interactively-p function invocations.
* lisp/org.el (org-mode): Adding optional argument KIND to all
org-called-interactively-p function invocations.
(org-copy-subtree): Adding optional argument KIND to all
org-called-interactively-p function invocations.
(org-paste-subtree): Adding optional argument KIND to all
org-called-interactively-p function invocations.
(org-store-link): Adding optional argument KIND to all
org-called-interactively-p function invocations.
(org-todo): Adding optional argument KIND to all
org-called-interactively-p function invocations.
(org-occur): Adding optional argument KIND to all
org-called-interactively-p function invocations.
Interactive-p is an obsolete function as of Emacs 23.2.
`org-called-interactively-p' takes care of the current (x)Emacs
version and use either `interactive-p' (for XEmacs and Emacs<23.2)
or `called-interactively-p'.
* lisp/ob-ref.el (org-babel-ref-goto-headline-id): Split out into its
own function.
(org-babel-ref-headline-body): Split out into its own function.
(org-babel-ref-resolve): Using new functions, and alignment.
* lisp/ob.el (org-babel-ref-goto-headline-id): Declare function.
(org-babel-ref-headline-body): Declare function.
(org-babel-expand-noweb-references): Now expands noweb references to
headlines during expansion.
* lisp/ob.el (org-babel-merge-params): Ensure variable parameters are
not reversed.
* lisp/ob-ref.el (org-babel-ref-split-args): Ensure variable
parameters are not reversed.
* lisp/ob-lob.el (org-babel-inline-lob-one-liner-regexp): Removing
this trailing space ensures that the insertion of the results looks
nice.
* lisp/ob.el (org-babel-insert-result): Insert inline lob line results
as inline results.
Now *all* code blocks which either are named `ref-name' or have the
:noweb-ref header argument value `ref-name' will have their bodies
concatenated when resolving the noweb reference <<ref-name>>.
* lisp/ob.el (org-babel-expand-noweb-references): Concatenating all
bodies with the appropriate name or :noweb-ref header argument.
* lisp/ob-R.el (ess-local-process-name): This variable wasn't known to
be defined.
* lisp/ob-lisp.el (org-babel-lisp-dir-fmt): This defcustom now has a
group specified.
* lisp/ob-tangle.el (org-bracket-link-regexp): This variable wasn't
known to be defined.
(org-babel-tangle-combine-named-blocks): Roll my own version of a
forbidden common lisp function.
* lisp/ob.el (org-babel-sha1-hash): Using a non-deprecated version of
called-interactively.
* lisp/ob.el (org-babel-sha1-hash): Don't modify info argument by
side-effect when sorting result-params list.
copy-sequence only does shallow copies, so if we're going to modify a
sub-list, we need to make sure we copy it first.
* lisp/ob.el (org-babel-result-regexp): Use non-shy group around
org-babel-data-names.
By default regexp-opt returns a shy group around its arguments. But
users of org-babel-result-regexp expect the third match-string to
contain the hash. With a shy group, the second match-string contains
the hash.
* doc/orgcard.tex: Adding line for org-babel-check-src-block.
* lisp/ob-keys.el (org-babel-key-bindings): Adding key sequence for
org-babel-check-src-block.
* lisp/ob.el (org-babel-expand-src-block): Fit within 80 cols.
(org-babel-edit-distance): Returns the edit distance of two strings.
(org-babel-check-src-block): Check a code block for errors.
* lisp/ob-ref.el (org-babel-ref-resolve): Using the new result regexp.
* lisp/ob.el (org-babel-data-names): Configurable list of names of data.
(org-babel-result-regexp): Using new results regexp.
* lisp/ob.el (org-babel-params-from-buffer): Now looking for header
arguments in #+Properties: as well as #+Babel:. Also, we're no
longer caching these results into a file local variable.
* lisp/ob-tangle.el (org-babel-spec-to-string): Check value of padline
on tangling, no longer use the now-removed variable
`org-babel-tangle-pad-newline'.
* lisp/ob.el (org-babel-header-arg-names): Add padline to the list of
header argument names.
(org-babel-default-header-args): Set the default value of padline to
"yes".
(org-babel-merge-params): Cleaned up the merge logic, added padline.
* doc/org.texi (padline): Documentation of the new padline header
argument.
* lisp/ob-exp.el (org-babel-exp-in-export-file): Now takes the
language as an argument.
(org-babel-exp-src-block): Explicitly pass language to
`org-babel-exp-in-export-file'.
(org-babel-exp-inline-src-blocks): Removed unused code.
(org-babel-exp-results): Explicitly pass language to
`org-babel-exp-in-export-file'.
* lisp/ob.el (org-babel-library-of-babel): declare variable
(org-babel-tangle-comment-links): declare function
* lisp/ob.el (org-babel-read-table): Inhibit lisp evaluation of values
when reading from tables.
(org-babel-read-list): Inhibit lisp evaluation of values when
reading from lists.
(org-babel-read): Add optional argument which can be used to inhibit
lisp evaluation of value.
* lisp/ob-ref.el (org-babel-ref-at-ref-p): Only try to read results as
a list if at the *beginning* of a list item.
* lisp/ob.el (org-babel-read-result): Only try to read results as a
list if at the *beginning* of a list item.
* lisp/ob.el (org-babel-read-list): Reading the value of a list has
been updated to reflect the new structure of org-mode lists in
elisp.
(org-babel-insert-result): Writing code block results to lists has
been updated to reflect the new list structure.
(org-babel-result-end): Remove a previous change to end-of-list
marker detection
* lisp/ob.el (org-babel-result-end): end position is end of current
sublist instead of bottom point, as results might be inserted in a
list themselves.
* lisp/org.el (org-skip-over-state-notes,org-store-log-note): use new
accessors.
* list/ob.el (org-babel-result-end): use new accessors.
* list/org-exp.el (org-export-mark-list-ending): use new accessors.
* lisp/ob.el (org-babel-src-block-names): Don't strip text properties from search hits
(org-babel-result-names): Don't strip text properties from search hits
* lisp/ob.el (org-babel-script-escape): Use `substring' comparison
instead of regexp matching
Workaround for regexp limitation, e.g.
(string-match
"^\\[.+\\]$"
(concat
"["
(mapconcat (lambda (i) "x") (number-sequence 1 33500) "")
"]"))
gives "Stack overflow in regexp matcher" in several current builds.
* lisp/org-src.el (org-edit-src-persistent-message): Change docstring.
(org-edit-src-code): Get rid of help message in echo area.
* lisp/ob.el (org-babel-do-in-edit-buffer): Do not pass 'quietly
argument to org-edit-src-code as this has been removed
* lisp/ob-exp.el (org-babel-exp-inline-src-blocks): Simplified
exportation of inline code blocks using normal code block execution
mechanism to insert results.
(org-babel-exp-results): Results exportation mechanism is unified
for both inline and regular code blocks.
* lisp/ob.el (org-babel-where-is-src-block-result): Returns the point
after an inline code block for inline code blocks.
* lisp/ob.el (org-babel-insert-result): Special handling of the
position of results of inline code blocks.
(org-babel-examplize-region): Now able to comment inline regions.
* lisp/ob.el (org-babel-map-inline-src-blocks): Macro for executing
code in each inline code block.
(org-babel-execute-buffer): Executes inline code blocks as well as
regular code blocks.
* lisp/ob-tangle.el (org-babel-spec-to-string): Adding "noweb" as a
linking comment type
(org-babel-tangle-comment-links): Returns comment links for the
source code block at point
* lisp/ob.el (org-babel-expand-noweb-references): When :comments is
set to "noweb" then wrap noweb references in comment links.
Thanks to Leo Alekseyev for bringing this bug to my attention
* lisp/ob.el (org-babel-open-src-block-result): Must collect result
*before* jumping to the result buffer.
* lisp/ob.el (org-babel-temp-file): Ensure that
org-babel-temporary-directory is bound before using.
(org-babel-remove-temporary-directory): Safer error throwing.
* lisp/ob.el (org-babel-script-escape): Replace commas with spaces for
better list reading when list items are packed with commas,
e.g. Haskell list output.
Thanks to Vladimir Alexiev for submitting this patch
* lisp/ob.el (org-babel-confirm-evaluate): Fix for the case when
org-confirm-babel-evaluate is a function (used to always ask no matter
what the function returns).
* doc/org.texi (Code evaluation security): Add example for using a
function.
* lisp/ob.el (org-babel-format-result): New function to format results
of src block execution.
(org-babel-execute-src-block): Use `org-babel-format-result' when
writing to file.
(org-babel-open-src-block-result): Use `org-babel-format-result' when
displaying results in a buffer; name results buffer differently.
* org.el: remove spurious linebreak introduced by earlier patch
* ob.el, ob-ref.el: remove double fix of the same problem
Achim Gratz <Stromeko@Stromeko.DE> wrote:
> this patch had already been partially applied by Carsten and Eric (in
> slightly a different way than I suggested). The changes to ob.el and
> ob-ref.el (the require statements) are therefore superfluous and should
> probably be backed out. There was also a superfluous whitespace change
> in org.el (a closing paren that was broken onto the next line). Patch
> to this effect is attached. You've already cleaned up org-agenda.el and
> the conditions in org-macs...
* lisp/ob.el (org-babel-remove-temporary-directory): Handle exception
with message informing of failure to remove directory.
Thanks to Antti Kaihola for the bug report:
http://thread.gmane.org/gmane.emacs.orgmode/34394
From: Antti Kaihola <akaihola <at> gmail.com>
Subject: Can't close Emacs+org-mode if /tmp and /home on different partitions
Newsgroups: gmane.emacs.orgmode
Date: 2010-12-02 08:33:28 GMT (6 days, 1 hour and 22 minutes ago)
I have /tmp on my root partition and a separate partition for /home.
When trying to close an Emacs session which is using org-mode, I get
this error:
move-file-to-trash: Non-regular file: Is a directory, /tmp/babel-XXXXXXX
(where XXXXXXX are random characters).
I tracked down the problem to org-babel-remove-temporary-directory
which ob.el adds to kill-emacs-hook. It tries to remove the temporary
directory using delete-directory, which in turn tries to move the
directory (by renaming) into trash, which is in my home directory.
I added this to my ~/.emacs.d/init.el:
(custom-set-variables '(temporary-file-directory "/home/akaihola/tmp/"))
and closing Emacs works correctly again. However, since my init.el is
part of emacs-starter-kit which I update frequently, I'd prefer not to
modify that file. Unfortunately the customization hook
emacs-starter-kit provides (~/.emacs.d/custom.el) is loaded too late
to affect the temporary directory.
I'm running emacs-snapshot 1:20090909-1 in Ubuntu 10.10. Looks like
this is really an Emacs bug and is already fixed:
http://groups.google.com/group/gnu.emacs.bug/browse_thread/thread/0446b8684a8ef504
Eric Schulte
emacs
Bastien Guerry
Michael Markert
Lawrence Mitchell
Sean O'Halpin
Carsten Dominik
Nicolas Goaziou
Dan Davison
Achim Gratz