3165 lines
119 KiB
EmacsLisp
3165 lines
119 KiB
EmacsLisp
;;; ob-core.el --- Working with Code Blocks -*- lexical-binding: t; -*-
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;; Copyright (C) 2009-2020 Free Software Foundation, Inc.
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;; Authors: Eric Schulte
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;; Dan Davison
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;; Keywords: literate programming, reproducible research
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;; Homepage: https://orgmode.org
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;; This file is part of GNU Emacs.
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;; GNU Emacs is free software: you can redistribute it and/or modify
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;; it under the terms of the GNU General Public License as published by
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;; the Free Software Foundation, either version 3 of the License, or
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;; (at your option) any later version.
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;; GNU Emacs is distributed in the hope that it will be useful,
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;; but WITHOUT ANY WARRANTY; without even the implied warranty of
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;; MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
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;; GNU General Public License for more details.
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;; You should have received a copy of the GNU General Public License
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;; along with GNU Emacs. If not, see <https://www.gnu.org/licenses/>.
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;;; Code:
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(require 'cl-lib)
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(require 'ob-eval)
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(require 'org-macs)
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(require 'org-compat)
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(defconst org-babel-exeext
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(if (memq system-type '(windows-nt cygwin))
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".exe"
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nil))
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(defvar org-babel-library-of-babel)
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(defvar org-edit-src-content-indentation)
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(defvar org-link-file-path-type)
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(defvar org-src-lang-modes)
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(defvar org-src-preserve-indentation)
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(declare-function org-at-item-p "org-list" ())
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(declare-function org-at-table-p "org" (&optional table-type))
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(declare-function org-babel-lob-execute-maybe "ob-lob" ())
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(declare-function org-babel-ref-goto-headline-id "ob-ref" (id))
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(declare-function org-babel-ref-headline-body "ob-ref" ())
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(declare-function org-babel-ref-parse "ob-ref" (assignment))
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(declare-function org-babel-ref-resolve "ob-ref" (ref))
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(declare-function org-babel-ref-split-args "ob-ref" (arg-string))
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(declare-function org-babel-tangle-comment-links "ob-tangle" (&optional info))
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(declare-function org-current-level "org" ())
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(declare-function org-cycle "org" (&optional arg))
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(declare-function org-edit-src-code "org-src" (&optional code edit-buffer-name))
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(declare-function org-edit-src-exit "org-src" ())
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(declare-function org-element-at-point "org-element" ())
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(declare-function org-element-context "org-element" (&optional element))
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(declare-function org-element-normalize-string "org-element" (s))
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(declare-function org-element-property "org-element" (property element))
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(declare-function org-element-type "org-element" (element))
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(declare-function org-entry-get "org" (pom property &optional inherit literal-nil))
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(declare-function org-escape-code-in-region "org-src" (beg end))
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(declare-function org-in-commented-heading-p "org" (&optional no-inheritance))
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(declare-function org-indent-line "org" ())
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(declare-function org-list-get-list-end "org-list" (item struct prevs))
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(declare-function org-list-prevs-alist "org-list" (struct))
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(declare-function org-list-struct "org-list" ())
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(declare-function org-list-to-generic "org-list" (LIST PARAMS))
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(declare-function org-list-to-lisp "org-list" (&optional delete))
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(declare-function org-macro-escape-arguments "org-macro" (&rest args))
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(declare-function org-make-options-regexp "org" (kwds &optional extra))
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(declare-function org-mark-ring-push "org" (&optional pos buffer))
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(declare-function org-narrow-to-subtree "org" ())
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(declare-function org-next-block "org" (arg &optional backward block-regexp))
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(declare-function org-open-at-point "org" (&optional in-emacs reference-buffer))
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(declare-function org-previous-block "org" (arg &optional block-regexp))
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(declare-function org-show-context "org" (&optional key))
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(declare-function org-src-coderef-format "org-src" (&optional element))
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(declare-function org-src-coderef-regexp "org-src" (fmt &optional label))
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(declare-function org-src-get-lang-mode "org-src" (lang))
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(declare-function org-table-align "org-table" ())
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(declare-function org-table-end "org-table" (&optional table-type))
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(declare-function org-table-import "org-table" (file arg))
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(declare-function org-table-to-lisp "org-table" (&optional txt))
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(declare-function org-unescape-code-in-string "org-src" (s))
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(declare-function orgtbl-to-generic "org-table" (table params))
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(declare-function orgtbl-to-orgtbl "org-table" (table params))
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(declare-function tramp-compat-make-temp-file "tramp-compat" (filename &optional dir-flag))
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(defgroup org-babel nil
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"Code block evaluation and management in `org-mode' documents."
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:tag "Babel"
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:group 'org)
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(defcustom org-confirm-babel-evaluate t
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"Confirm before evaluation.
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\\<org-mode-map>\
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Require confirmation before interactively evaluating code
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blocks in Org buffers. The default value of this variable is t,
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meaning confirmation is required for any code block evaluation.
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This variable can be set to nil to inhibit any future
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confirmation requests. This variable can also be set to a
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function which takes two arguments the language of the code block
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and the body of the code block. Such a function should then
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return a non-nil value if the user should be prompted for
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execution or nil if no prompt is required.
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Warning: Disabling confirmation may result in accidental
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evaluation of potentially harmful code. It may be advisable
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remove code block execution from `\\[org-ctrl-c-ctrl-c]' \
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as further protection
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against accidental code block evaluation. The
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`org-babel-no-eval-on-ctrl-c-ctrl-c' variable can be used to
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remove code block execution from the `\\[org-ctrl-c-ctrl-c]' keybinding."
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:group 'org-babel
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:version "24.1"
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:type '(choice boolean function))
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;; don't allow this variable to be changed through file settings
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(put 'org-confirm-babel-evaluate 'safe-local-variable (lambda (x) (eq x t)))
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(defcustom org-babel-no-eval-on-ctrl-c-ctrl-c nil
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"\\<org-mode-map>\
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Remove code block evaluation from the `\\[org-ctrl-c-ctrl-c]' key binding."
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:group 'org-babel
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:version "24.1"
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:type 'boolean)
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(defcustom org-babel-results-keyword "RESULTS"
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"Keyword used to name results generated by code blocks.
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It should be \"RESULTS\". However any capitalization may be
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used."
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:group 'org-babel
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:version "24.4"
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:package-version '(Org . "8.0")
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:type 'string
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:safe (lambda (v)
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(and (stringp v)
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(eq (compare-strings "RESULTS" nil nil v nil nil t)
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t))))
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(defcustom org-babel-noweb-wrap-start "<<"
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"String used to begin a noweb reference in a code block.
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See also `org-babel-noweb-wrap-end'."
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:group 'org-babel
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:type 'string)
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(defcustom org-babel-noweb-wrap-end ">>"
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"String used to end a noweb reference in a code block.
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See also `org-babel-noweb-wrap-start'."
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:group 'org-babel
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:type 'string)
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(defcustom org-babel-inline-result-wrap "=%s="
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"Format string used to wrap inline results.
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This string must include a \"%s\" which will be replaced by the results."
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:group 'org-babel
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:type 'string)
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(put 'org-babel-inline-result-wrap
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'safe-local-variable
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(lambda (value)
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(and (stringp value)
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(string-match-p "%s" value))))
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(defcustom org-babel-hash-show-time nil
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"Non-nil means show the time the code block was evaluated in the result hash."
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:group 'org-babel
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:type 'boolean
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:version "26.1"
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:package-version '(Org . "9.0")
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:safe #'booleanp)
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(defcustom org-babel-uppercase-example-markers nil
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"When non-nil, begin/end example markers will be inserted in upper case."
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:group 'org-babel
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:type 'boolean
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:version "26.1"
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:package-version '(Org . "9.1")
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:safe #'booleanp)
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(defun org-babel-noweb-wrap (&optional regexp)
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"Return regexp matching a Noweb reference.
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Match any reference, or only those matching REGEXP, if non-nil.
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When matching, reference is stored in match group 1."
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(concat (regexp-quote org-babel-noweb-wrap-start)
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(or regexp "\\([^ \t\n]\\(?:.*?[^ \t\n]\\)?\\)")
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(regexp-quote org-babel-noweb-wrap-end)))
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(defvar org-babel-src-name-regexp
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"^[ \t]*#\\+name:[ \t]*"
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"Regular expression used to match a source name line.")
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(defvar org-babel-multi-line-header-regexp
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"^[ \t]*#\\+headers?:[ \t]*\\([^\n]*\\)$"
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"Regular expression used to match multi-line header arguments.")
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(defvar org-babel-src-block-regexp
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(concat
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;; (1) indentation (2) lang
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"^\\([ \t]*\\)#\\+begin_src[ \t]+\\([^ \f\t\n\r\v]+\\)[ \t]*"
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;; (3) switches
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"\\([^\":\n]*\"[^\"\n*]*\"[^\":\n]*\\|[^\":\n]*\\)"
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;; (4) header arguments
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"\\([^\n]*\\)\n"
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;; (5) body
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"\\([^\000]*?\n\\)??[ \t]*#\\+end_src")
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"Regexp used to identify code blocks.")
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(defun org-babel--get-vars (params)
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"Return the babel variable assignments in PARAMS.
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PARAMS is a quasi-alist of header args, which may contain
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multiple entries for the key `:var'. This function returns a
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list of the cdr of all the `:var' entries."
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(mapcar #'cdr
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(cl-remove-if-not (lambda (x) (eq (car x) :var)) params)))
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(defvar org-babel-exp-reference-buffer nil
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"Buffer containing original contents of the exported buffer.
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This is used by Babel to resolve references in source blocks.
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Its value is dynamically bound during export.")
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(defun org-babel-check-confirm-evaluate (info)
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"Check whether INFO allows code block evaluation.
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Returns nil if evaluation is disallowed, t if it is
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unconditionally allowed, and the symbol `query' if the user
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should be asked whether to allow evaluation."
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(let* ((headers (nth 2 info))
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(eval (or (cdr (assq :eval headers))
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(when (assq :noeval headers) "no")))
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(eval-no (member eval '("no" "never")))
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(export org-babel-exp-reference-buffer)
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(eval-no-export (and export (member eval '("no-export" "never-export"))))
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(noeval (or eval-no eval-no-export))
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(query (or (equal eval "query")
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(and export (equal eval "query-export"))
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(if (functionp org-confirm-babel-evaluate)
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(funcall org-confirm-babel-evaluate
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;; Language, code block body.
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(nth 0 info) (nth 1 info))
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org-confirm-babel-evaluate))))
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(cond
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(noeval nil)
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(query 'query)
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(t t))))
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(defun org-babel-check-evaluate (info)
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"Check if code block INFO should be evaluated.
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Do not query the user, but do display an informative message if
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evaluation is blocked. Returns non-nil if evaluation is not blocked."
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(let ((confirmed (org-babel-check-confirm-evaluate info)))
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(unless confirmed
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(message "Evaluation of this %s code block%sis disabled."
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(nth 0 info)
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(let ((name (nth 4 info)))
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(if name (format " (%s) " name) " "))))
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confirmed))
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;; Dynamically scoped for asynchronous export.
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(defvar org-babel-confirm-evaluate-answer-no)
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(defun org-babel-confirm-evaluate (info)
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"Confirm evaluation of the code block INFO.
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This query can also be suppressed by setting the value of
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`org-confirm-babel-evaluate' to nil, in which case all future
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interactive code block evaluations will proceed without any
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confirmation from the user.
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Note disabling confirmation may result in accidental evaluation
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of potentially harmful code.
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The variable `org-babel-confirm-evaluate-answer-no' is used by
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the async export process, which requires a non-interactive
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environment, to override this check."
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(let* ((evalp (org-babel-check-confirm-evaluate info))
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(lang (nth 0 info))
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(name (nth 4 info))
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(name-string (if name (format " (%s) " name) " ")))
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(pcase evalp
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(`nil nil)
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(`t t)
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(`query (or
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(and (not (bound-and-true-p
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org-babel-confirm-evaluate-answer-no))
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(yes-or-no-p
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(format "Evaluate this %s code block%son your system? "
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lang name-string)))
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(progn
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(message "Evaluation of this %s code block%sis aborted."
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lang name-string)
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nil)))
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(x (error "Unexpected value `%s' from `org-babel-check-confirm-evaluate'" x)))))
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;;;###autoload
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(defun org-babel-execute-safely-maybe ()
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(unless org-babel-no-eval-on-ctrl-c-ctrl-c
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(org-babel-execute-maybe)))
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;;;###autoload
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(defun org-babel-execute-maybe ()
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(interactive)
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(or (org-babel-execute-src-block-maybe)
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(org-babel-lob-execute-maybe)))
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(defmacro org-babel-when-in-src-block (&rest body)
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"Execute BODY if point is in a source block and return t.
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Otherwise do nothing and return nil."
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`(if (memq (org-element-type (org-element-context))
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'(inline-src-block src-block))
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(progn
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,@body
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t)
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nil))
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(defun org-babel-execute-src-block-maybe ()
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"Conditionally execute a source block.
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Detect if this is context for a Babel src-block and if so
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then run `org-babel-execute-src-block'."
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(interactive)
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(org-babel-when-in-src-block
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(org-babel-eval-wipe-error-buffer)
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(org-babel-execute-src-block current-prefix-arg)))
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;;;###autoload
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(defun org-babel-view-src-block-info ()
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"Display information on the current source block.
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This includes header arguments, language and name, and is largely
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a window into the `org-babel-get-src-block-info' function."
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(interactive)
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(let ((info (org-babel-get-src-block-info 'light))
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(full (lambda (it) (> (length it) 0)))
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(printf (lambda (fmt &rest args) (princ (apply #'format fmt args)))))
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(when info
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(with-help-window (help-buffer)
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(let ((name (nth 4 info))
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(lang (nth 0 info))
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(switches (nth 3 info))
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(header-args (nth 2 info)))
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(when name (funcall printf "Name: %s\n" name))
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(when lang (funcall printf "Lang: %s\n" lang))
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(funcall printf "Properties:\n")
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(funcall printf "\t:header-args \t%s\n" (org-entry-get (point) "header-args" t))
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(funcall printf "\t:header-args:%s \t%s\n" lang (org-entry-get (point) (concat "header-args:" lang) t))
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(when (funcall full switches) (funcall printf "Switches: %s\n" switches))
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(funcall printf "Header Arguments:\n")
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(dolist (pair (sort header-args
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(lambda (a b) (string< (symbol-name (car a))
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(symbol-name (car b))))))
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(when (funcall full (format "%s" (cdr pair)))
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(funcall printf "\t%S%s\t%s\n"
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(car pair)
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(if (> (length (format "%S" (car pair))) 7) "" "\t")
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(cdr pair)))))))))
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;;;###autoload
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(defun org-babel-expand-src-block-maybe ()
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"Conditionally expand a source block.
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Detect if this is context for an org-babel src-block and if so
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then run `org-babel-expand-src-block'."
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(interactive)
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(org-babel-when-in-src-block
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(org-babel-expand-src-block current-prefix-arg)))
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;;;###autoload
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(defun org-babel-load-in-session-maybe ()
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"Conditionally load a source block in a session.
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Detect if this is context for an org-babel src-block and if so
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then run `org-babel-load-in-session'."
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(interactive)
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(org-babel-when-in-src-block
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(org-babel-load-in-session current-prefix-arg)))
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(add-hook 'org-metaup-hook 'org-babel-load-in-session-maybe)
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;;;###autoload
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(defun org-babel-pop-to-session-maybe ()
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"Conditionally pop to a session.
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Detect if this is context for an org-babel src-block and if so
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then run `org-babel-switch-to-session'."
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(interactive)
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(org-babel-when-in-src-block
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(org-babel-switch-to-session current-prefix-arg)))
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(add-hook 'org-metadown-hook 'org-babel-pop-to-session-maybe)
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(defconst org-babel-common-header-args-w-values
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'((cache . ((no yes)))
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(cmdline . :any)
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(colnames . ((nil no yes)))
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(comments . ((no link yes org both noweb)))
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(dir . :any)
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(eval . ((yes no no-export strip-export never-export eval never
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query)))
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(exports . ((code results both none)))
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(epilogue . :any)
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(file . :any)
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(file-desc . :any)
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(file-ext . :any)
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(hlines . ((no yes)))
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(mkdirp . ((yes no)))
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(no-expand)
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(noeval)
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(noweb . ((yes no tangle no-export strip-export)))
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(noweb-ref . :any)
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(noweb-sep . :any)
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(output-dir . :any)
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(padline . ((yes no)))
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(post . :any)
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(prologue . :any)
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(results . ((file list vector table scalar verbatim)
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(raw html latex org code pp drawer link graphics)
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(replace silent none append prepend)
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(output value)))
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(rownames . ((no yes)))
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(sep . :any)
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(session . :any)
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(shebang . :any)
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(tangle . ((tangle yes no :any)))
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(tangle-mode . ((#o755 #o555 #o444 :any)))
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(var . :any)
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(wrap . :any)))
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(defconst org-babel-header-arg-names
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(mapcar #'car org-babel-common-header-args-w-values)
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"Common header arguments used by org-babel.
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Note that individual languages may define their own language
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specific header arguments as well.")
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(defconst org-babel-safe-header-args
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'(:cache :colnames :comments :exports :epilogue :hlines :noeval
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:noweb :noweb-ref :noweb-sep :padline :prologue :rownames
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:sep :session :tangle :wrap
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(:eval . ("never" "query"))
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(:results . (lambda (str) (not (string-match "file" str)))))
|
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"A list of safe header arguments for babel source blocks.
|
|
|
|
The list can have entries of the following forms:
|
|
- :ARG -> :ARG is always a safe header arg
|
|
- (:ARG . (VAL1 VAL2 ...)) -> :ARG is safe as a header arg if it is
|
|
`equal' to one of the VALs.
|
|
- (:ARG . FN) -> :ARG is safe as a header arg if the function FN
|
|
returns non-nil. FN is passed one
|
|
argument, the value of the header arg
|
|
(as a string).")
|
|
|
|
(defmacro org-babel-header-args-safe-fn (safe-list)
|
|
"Return a function that determines whether a list of header args are safe.
|
|
|
|
Intended usage is:
|
|
\(put \\='org-babel-default-header-args \\='safe-local-variable
|
|
(org-babel-header-args-safe-p org-babel-safe-header-args)
|
|
|
|
This allows org-babel languages to extend the list of safe values for
|
|
their `org-babel-default-header-args:foo' variable.
|
|
|
|
For the format of SAFE-LIST, see `org-babel-safe-header-args'."
|
|
`(lambda (value)
|
|
(and (listp value)
|
|
(cl-every
|
|
(lambda (pair)
|
|
(and (consp pair)
|
|
(org-babel-one-header-arg-safe-p pair ,safe-list)))
|
|
value))))
|
|
|
|
(defvar org-babel-default-header-args
|
|
'((:session . "none") (:results . "replace") (:exports . "code")
|
|
(:cache . "no") (:noweb . "no") (:hlines . "no") (:tangle . "no"))
|
|
"Default arguments to use when evaluating a source block.")
|
|
(put 'org-babel-default-header-args 'safe-local-variable
|
|
(org-babel-header-args-safe-fn org-babel-safe-header-args))
|
|
|
|
(defvar org-babel-default-inline-header-args
|
|
'((:session . "none") (:results . "replace")
|
|
(:exports . "results") (:hlines . "yes"))
|
|
"Default arguments to use when evaluating an inline source block.")
|
|
(put 'org-babel-default-inline-header-args 'safe-local-variable
|
|
(org-babel-header-args-safe-fn org-babel-safe-header-args))
|
|
|
|
(defconst org-babel-name-regexp
|
|
(format "^[ \t]*#\\+%s:[ \t]*"
|
|
;; FIXME: TBLNAME is for backward compatibility.
|
|
(regexp-opt '("NAME" "TBLNAME")))
|
|
"Regexp matching a NAME keyword.")
|
|
|
|
(defconst org-babel-result-regexp
|
|
(format "^[ \t]*#\\+%s\\(?:\\[\\(?:%s \\)?\\([[:alnum:]]+\\)\\]\\)?:[ \t]*"
|
|
org-babel-results-keyword
|
|
;; <%Y-%m-%d %H:%M:%S>
|
|
"<\\(?:[0-9]\\{4\\}-[0-1][0-9]-[0-3][0-9] \
|
|
[0-2][0-9]\\(?::[0-5][0-9]\\)\\{2\\}\\)>")
|
|
"Regular expression used to match result lines.
|
|
If the results are associated with a hash key then the hash will
|
|
be saved in match group 1.")
|
|
|
|
(defconst org-babel-result-w-name-regexp
|
|
(concat org-babel-result-regexp "\\(?9:[^ \t\n\r\v\f]+\\)")
|
|
"Regexp matching a RESULTS keyword with a name.
|
|
Name is saved in match group 9.")
|
|
|
|
(defvar org-babel-min-lines-for-block-output 10
|
|
"The minimum number of lines for block output.
|
|
If number of lines of output is equal to or exceeds this
|
|
value, the output is placed in a #+begin_example...#+end_example
|
|
block. Otherwise the output is marked as literal by inserting
|
|
colons at the starts of the lines. This variable only takes
|
|
effect if the :results output option is in effect.")
|
|
|
|
(defvar org-babel-noweb-error-all-langs nil
|
|
"Raise errors when noweb references don't resolve.
|
|
Also see `org-babel-noweb-error-langs' to control noweb errors on
|
|
a language by language bases.")
|
|
|
|
(defvar org-babel-noweb-error-langs nil
|
|
"Languages for which Babel will raise literate programming errors.
|
|
List of languages for which errors should be raised when the
|
|
source code block satisfying a noweb reference in this language
|
|
can not be resolved. Also see `org-babel-noweb-error-all-langs'
|
|
to raise errors for all languages.")
|
|
|
|
(defvar org-babel-hash-show 4
|
|
"Number of initial characters to show of a hidden results hash.")
|
|
|
|
(defvar org-babel-after-execute-hook nil
|
|
"Hook for functions to be called after `org-babel-execute-src-block'")
|
|
|
|
(defun org-babel-named-src-block-regexp-for-name (&optional name)
|
|
"Generate a regexp used to match a source block named NAME.
|
|
If NAME is nil, match any name. Matched name is then put in
|
|
match group 9. Other match groups are defined in
|
|
`org-babel-src-block-regexp'."
|
|
(concat org-babel-src-name-regexp
|
|
(concat (if name (regexp-quote name) "\\(?9:.*?\\)") "[ \t]*" )
|
|
"\\(?:\n[ \t]*#\\+\\S-+:.*\\)*?"
|
|
"\n"
|
|
(substring org-babel-src-block-regexp 1)))
|
|
|
|
(defun org-babel-named-data-regexp-for-name (name)
|
|
"Generate a regexp used to match data named NAME."
|
|
(concat org-babel-name-regexp (regexp-quote name) "[ \t]*$"))
|
|
|
|
(defun org-babel--normalize-body (datum)
|
|
"Normalize body for element or object DATUM.
|
|
DATUM is a source block element or an inline source block object.
|
|
Remove final newline character and spurious indentation."
|
|
(let* ((value (org-element-property :value datum))
|
|
(body (if (string-suffix-p "\n" value)
|
|
(substring value 0 -1)
|
|
value)))
|
|
(cond ((eq (org-element-type datum) 'inline-src-block)
|
|
;; Newline characters and indentation in an inline
|
|
;; src-block are not meaningful, since they could come from
|
|
;; some paragraph filling. Treat them as a white space.
|
|
(replace-regexp-in-string "\n[ \t]*" " " body))
|
|
((or org-src-preserve-indentation
|
|
(org-element-property :preserve-indent datum))
|
|
body)
|
|
(t (org-remove-indentation body)))))
|
|
|
|
;;; functions
|
|
(defvar org-babel-current-src-block-location nil
|
|
"Marker pointing to the source block currently being executed.
|
|
This may also point to a call line or an inline code block. If
|
|
multiple blocks are being executed (e.g., in chained execution
|
|
through use of the :var header argument) this marker points to
|
|
the outer-most code block.")
|
|
|
|
(defvar *this*)
|
|
|
|
(defun org-babel-get-src-block-info (&optional light datum)
|
|
"Extract information from a source block or inline source block.
|
|
|
|
When optional argument LIGHT is non-nil, Babel does not resolve
|
|
remote variable references; a process which could likely result
|
|
in the execution of other code blocks, and do not evaluate Lisp
|
|
values in parameters.
|
|
|
|
By default, consider the block at point. However, when optional
|
|
argument DATUM is provided, extract information from that parsed
|
|
object instead.
|
|
|
|
Return nil if point is not on a source block. Otherwise, return
|
|
a list with the following pattern:
|
|
|
|
(language body arguments switches name start coderef)"
|
|
(let* ((datum (or datum (org-element-context)))
|
|
(type (org-element-type datum))
|
|
(inline (eq type 'inline-src-block)))
|
|
(when (memq type '(inline-src-block src-block))
|
|
(let* ((lang (org-element-property :language datum))
|
|
(lang-headers (intern
|
|
(concat "org-babel-default-header-args:" lang)))
|
|
(name (org-element-property :name datum))
|
|
(info
|
|
(list
|
|
lang
|
|
(org-babel--normalize-body datum)
|
|
(apply #'org-babel-merge-params
|
|
(if inline org-babel-default-inline-header-args
|
|
org-babel-default-header-args)
|
|
(and (boundp lang-headers) (eval lang-headers t))
|
|
(append
|
|
;; If DATUM is provided, make sure we get node
|
|
;; properties applicable to its location within
|
|
;; the document.
|
|
(org-with-point-at (org-element-property :begin datum)
|
|
(org-babel-params-from-properties lang light))
|
|
(mapcar (lambda (h)
|
|
(org-babel-parse-header-arguments h light))
|
|
(cons (org-element-property :parameters datum)
|
|
(org-element-property :header datum)))))
|
|
(or (org-element-property :switches datum) "")
|
|
name
|
|
(org-element-property (if inline :begin :post-affiliated)
|
|
datum)
|
|
(and (not inline) (org-src-coderef-format datum)))))
|
|
(unless light
|
|
(setf (nth 2 info) (org-babel-process-params (nth 2 info))))
|
|
(setf (nth 2 info) (org-babel-generate-file-param name (nth 2 info)))
|
|
info))))
|
|
|
|
;;;###autoload
|
|
(defun org-babel-execute-src-block (&optional arg info params)
|
|
"Execute the current source code block.
|
|
Insert the results of execution into the buffer. Source code
|
|
execution and the collection and formatting of results can be
|
|
controlled through a variety of header arguments.
|
|
|
|
With prefix argument ARG, force re-execution even if an existing
|
|
result cached in the buffer would otherwise have been returned.
|
|
|
|
Optionally supply a value for INFO in the form returned by
|
|
`org-babel-get-src-block-info'.
|
|
|
|
Optionally supply a value for PARAMS which will be merged with
|
|
the header arguments specified at the front of the source code
|
|
block."
|
|
(interactive)
|
|
(let* ((org-babel-current-src-block-location
|
|
(or org-babel-current-src-block-location
|
|
(nth 5 info)
|
|
(org-babel-where-is-src-block-head)))
|
|
(info (if info (copy-tree info) (org-babel-get-src-block-info))))
|
|
;; Merge PARAMS with INFO before considering source block
|
|
;; evaluation since both could disagree.
|
|
(cl-callf org-babel-merge-params (nth 2 info) params)
|
|
(when (org-babel-check-evaluate info)
|
|
(cl-callf org-babel-process-params (nth 2 info))
|
|
(let* ((params (nth 2 info))
|
|
(cache (let ((c (cdr (assq :cache params))))
|
|
(and (not arg) c (string= "yes" c))))
|
|
(new-hash (and cache (org-babel-sha1-hash info :eval)))
|
|
(old-hash (and cache (org-babel-current-result-hash)))
|
|
(current-cache (and new-hash (equal new-hash old-hash))))
|
|
(cond
|
|
(current-cache
|
|
(save-excursion ;Return cached result.
|
|
(goto-char (org-babel-where-is-src-block-result nil info))
|
|
(forward-line)
|
|
(skip-chars-forward " \t")
|
|
(let ((result (org-babel-read-result)))
|
|
(message (replace-regexp-in-string "%" "%%" (format "%S" result)))
|
|
result)))
|
|
((org-babel-confirm-evaluate info)
|
|
(let* ((lang (nth 0 info))
|
|
(result-params (cdr (assq :result-params params)))
|
|
;; Expand noweb references in BODY and remove any
|
|
;; coderef.
|
|
(body
|
|
(let ((coderef (nth 6 info))
|
|
(expand
|
|
(if (org-babel-noweb-p params :eval)
|
|
(org-babel-expand-noweb-references info)
|
|
(nth 1 info))))
|
|
(if (not coderef) expand
|
|
(replace-regexp-in-string
|
|
(org-src-coderef-regexp coderef) "" expand nil nil 1))))
|
|
(dir (cdr (assq :dir params)))
|
|
(mkdirp (cdr (assq :mkdirp params)))
|
|
(default-directory
|
|
(cond
|
|
((not dir) default-directory)
|
|
((member mkdirp '("no" "nil" nil))
|
|
(file-name-as-directory (expand-file-name dir)))
|
|
(t
|
|
(let ((d (file-name-as-directory (expand-file-name dir))))
|
|
(make-directory d 'parents)
|
|
d))))
|
|
(cmd (intern (concat "org-babel-execute:" lang)))
|
|
result)
|
|
(unless (fboundp cmd)
|
|
(error "No org-babel-execute function for %s!" lang))
|
|
(message "executing %s code block%s..."
|
|
(capitalize lang)
|
|
(let ((name (nth 4 info)))
|
|
(if name (format " (%s)" name) "")))
|
|
(if (member "none" result-params)
|
|
(progn (funcall cmd body params)
|
|
(message "result silenced"))
|
|
(setq result
|
|
(let ((r (funcall cmd body params)))
|
|
(if (and (eq (cdr (assq :result-type params)) 'value)
|
|
(or (member "vector" result-params)
|
|
(member "table" result-params))
|
|
(not (listp r)))
|
|
(list (list r))
|
|
r)))
|
|
(let ((file (and (member "file" result-params)
|
|
(cdr (assq :file params)))))
|
|
;; If non-empty result and :file then write to :file.
|
|
(when file
|
|
;; If `:results' are special types like `link' or
|
|
;; `graphics', don't write result to `:file'. Only
|
|
;; insert a link to `:file'.
|
|
(when (and result
|
|
(not (or (member "link" result-params)
|
|
(member "graphics" result-params))))
|
|
(with-temp-file file
|
|
(insert (org-babel-format-result
|
|
result
|
|
(cdr (assq :sep params))))))
|
|
(setq result file))
|
|
;; Possibly perform post process provided its
|
|
;; appropriate. Dynamically bind "*this*" to the
|
|
;; actual results of the block.
|
|
(let ((post (cdr (assq :post params))))
|
|
(when post
|
|
(let ((*this* (if (not file) result
|
|
(org-babel-result-to-file
|
|
file
|
|
(let ((desc (assq :file-desc params)))
|
|
(and desc (or (cdr desc) result)))))))
|
|
(setq result (org-babel-ref-resolve post))
|
|
(when file
|
|
(setq result-params (remove "file" result-params))))))
|
|
(org-babel-insert-result
|
|
result result-params info new-hash lang)))
|
|
(run-hooks 'org-babel-after-execute-hook)
|
|
result)))))))
|
|
|
|
(defun org-babel-expand-body:generic (body params &optional var-lines)
|
|
"Expand BODY with PARAMS.
|
|
Expand a block of code with org-babel according to its header
|
|
arguments. This generic implementation of body expansion is
|
|
called for languages which have not defined their own specific
|
|
org-babel-expand-body:lang function."
|
|
(let ((pro (cdr (assq :prologue params)))
|
|
(epi (cdr (assq :epilogue params))))
|
|
(mapconcat #'identity
|
|
(append (when pro (list pro))
|
|
var-lines
|
|
(list body)
|
|
(when epi (list epi)))
|
|
"\n")))
|
|
|
|
;;;###autoload
|
|
(defun org-babel-expand-src-block (&optional _arg info params)
|
|
"Expand the current source code block.
|
|
Expand according to the source code block's header
|
|
arguments and pop open the results in a preview buffer."
|
|
(interactive)
|
|
(let* ((info (or info (org-babel-get-src-block-info)))
|
|
(lang (nth 0 info))
|
|
(params (setf (nth 2 info)
|
|
(sort (org-babel-merge-params (nth 2 info) params)
|
|
(lambda (el1 el2) (string< (symbol-name (car el1))
|
|
(symbol-name (car el2)))))))
|
|
(body (setf (nth 1 info)
|
|
(if (org-babel-noweb-p params :eval)
|
|
(org-babel-expand-noweb-references info) (nth 1 info))))
|
|
(expand-cmd (intern (concat "org-babel-expand-body:" lang)))
|
|
(assignments-cmd (intern (concat "org-babel-variable-assignments:"
|
|
lang)))
|
|
(expanded
|
|
(if (fboundp expand-cmd) (funcall expand-cmd body params)
|
|
(org-babel-expand-body:generic
|
|
body params (and (fboundp assignments-cmd)
|
|
(funcall assignments-cmd params))))))
|
|
(if (called-interactively-p 'any)
|
|
(org-edit-src-code
|
|
expanded (concat "*Org-Babel Preview " (buffer-name) "[ " lang " ]*"))
|
|
expanded)))
|
|
|
|
(defun org-babel-edit-distance (s1 s2)
|
|
"Return the edit (levenshtein) distance between strings S1 S2."
|
|
(let* ((l1 (length s1))
|
|
(l2 (length s2))
|
|
(dist (vconcat (mapcar (lambda (_) (make-vector (1+ l2) nil))
|
|
(number-sequence 1 (1+ l1)))))
|
|
(in (lambda (i j) (aref (aref dist i) j))))
|
|
(setf (aref (aref dist 0) 0) 0)
|
|
(dolist (j (number-sequence 1 l2))
|
|
(setf (aref (aref dist 0) j) j))
|
|
(dolist (i (number-sequence 1 l1))
|
|
(setf (aref (aref dist i) 0) i)
|
|
(dolist (j (number-sequence 1 l2))
|
|
(setf (aref (aref dist i) j)
|
|
(min
|
|
(1+ (funcall in (1- i) j))
|
|
(1+ (funcall in i (1- j)))
|
|
(+ (if (equal (aref s1 (1- i)) (aref s2 (1- j))) 0 1)
|
|
(funcall in (1- i) (1- j)))))))
|
|
(funcall in l1 l2)))
|
|
|
|
(defun org-babel-combine-header-arg-lists (original &rest others)
|
|
"Combine a number of lists of header argument names and arguments."
|
|
(let ((results (copy-sequence original)))
|
|
(dolist (new-list others)
|
|
(dolist (arg-pair new-list)
|
|
(let ((header (car arg-pair)))
|
|
(setq results
|
|
(cons arg-pair (cl-remove-if
|
|
(lambda (pair) (equal header (car pair)))
|
|
results))))))
|
|
results))
|
|
|
|
;;;###autoload
|
|
(defun org-babel-check-src-block ()
|
|
"Check for misspelled header arguments in the current code block."
|
|
(interactive)
|
|
;; TODO: report malformed code block
|
|
;; TODO: report incompatible combinations of header arguments
|
|
;; TODO: report uninitialized variables
|
|
(let ((too-close 2) ;; <- control closeness to report potential match
|
|
(names (mapcar #'symbol-name org-babel-header-arg-names)))
|
|
(dolist (header (mapcar (lambda (arg) (substring (symbol-name (car arg)) 1))
|
|
(and (org-babel-where-is-src-block-head)
|
|
(org-babel-parse-header-arguments
|
|
(org-no-properties
|
|
(match-string 4))))))
|
|
(dolist (name names)
|
|
(when (and (not (string= header name))
|
|
(<= (org-babel-edit-distance header name) too-close)
|
|
(not (member header names)))
|
|
(error "Supplied header \"%S\" is suspiciously close to \"%S\""
|
|
header name))))
|
|
(message "No suspicious header arguments found.")))
|
|
|
|
;;;###autoload
|
|
(defun org-babel-insert-header-arg (&optional header-arg value)
|
|
"Insert a header argument selecting from lists of common args and values."
|
|
(interactive)
|
|
(let* ((info (org-babel-get-src-block-info 'light))
|
|
(lang (car info))
|
|
(begin (nth 5 info))
|
|
(lang-headers (intern (concat "org-babel-header-args:" lang)))
|
|
(headers (org-babel-combine-header-arg-lists
|
|
org-babel-common-header-args-w-values
|
|
(when (boundp lang-headers) (eval lang-headers t))))
|
|
(header-arg (or header-arg
|
|
(completing-read
|
|
"Header Arg: "
|
|
(mapcar
|
|
(lambda (header-spec) (symbol-name (car header-spec)))
|
|
headers))))
|
|
(vals (cdr (assoc (intern header-arg) headers)))
|
|
(value (or value
|
|
(cond
|
|
((eq vals :any)
|
|
(read-from-minibuffer "value: "))
|
|
((listp vals)
|
|
(mapconcat
|
|
(lambda (group)
|
|
(let ((arg (completing-read
|
|
"Value: "
|
|
(cons "default"
|
|
(mapcar #'symbol-name group)))))
|
|
(if (and arg (not (string= "default" arg)))
|
|
(concat arg " ")
|
|
"")))
|
|
vals ""))))))
|
|
(save-excursion
|
|
(goto-char begin)
|
|
(goto-char (point-at-eol))
|
|
(unless (= (char-before (point)) ?\ ) (insert " "))
|
|
(insert ":" header-arg) (when value (insert " " value)))))
|
|
|
|
;; Add support for completing-read insertion of header arguments after ":"
|
|
(defun org-babel-header-arg-expand ()
|
|
"Call `org-babel-enter-header-arg-w-completion' in appropriate contexts."
|
|
(when (and (equal (char-before) ?\:) (org-babel-where-is-src-block-head))
|
|
(org-babel-enter-header-arg-w-completion (match-string 2))))
|
|
|
|
(defun org-babel-enter-header-arg-w-completion (&optional lang)
|
|
"Insert header argument appropriate for LANG with completion."
|
|
(let* ((lang-headers-var (intern (concat "org-babel-header-args:" lang)))
|
|
(lang-headers (when (boundp lang-headers-var) (eval lang-headers-var t)))
|
|
(headers-w-values (org-babel-combine-header-arg-lists
|
|
org-babel-common-header-args-w-values lang-headers))
|
|
(headers (mapcar #'symbol-name (mapcar #'car headers-w-values)))
|
|
(header (org-completing-read "Header Arg: " headers))
|
|
(args (cdr (assoc (intern header) headers-w-values)))
|
|
(arg (when (and args (listp args))
|
|
(org-completing-read
|
|
(format "%s: " header)
|
|
(mapcar #'symbol-name (apply #'append args))))))
|
|
(insert (concat header " " (or arg "")))
|
|
(cons header arg)))
|
|
|
|
(add-hook 'org-tab-first-hook 'org-babel-header-arg-expand)
|
|
|
|
;;;###autoload
|
|
(defun org-babel-load-in-session (&optional _arg info)
|
|
"Load the body of the current source-code block.
|
|
Evaluate the header arguments for the source block before
|
|
entering the session. After loading the body this pops open the
|
|
session."
|
|
(interactive)
|
|
(let* ((info (or info (org-babel-get-src-block-info)))
|
|
(lang (nth 0 info))
|
|
(params (nth 2 info))
|
|
(body (if (not info)
|
|
(user-error "No src code block at point")
|
|
(setf (nth 1 info)
|
|
(if (org-babel-noweb-p params :eval)
|
|
(org-babel-expand-noweb-references info)
|
|
(nth 1 info)))))
|
|
(session (cdr (assq :session params)))
|
|
(dir (cdr (assq :dir params)))
|
|
(default-directory
|
|
(or (and dir (file-name-as-directory dir)) default-directory))
|
|
(cmd (intern (concat "org-babel-load-session:" lang))))
|
|
(unless (fboundp cmd)
|
|
(error "No org-babel-load-session function for %s!" lang))
|
|
(pop-to-buffer (funcall cmd session body params))
|
|
(end-of-line 1)))
|
|
|
|
;;;###autoload
|
|
(defun org-babel-initiate-session (&optional arg info)
|
|
"Initiate session for current code block.
|
|
If called with a prefix argument then resolve any variable
|
|
references in the header arguments and assign these variables in
|
|
the session. Copy the body of the code block to the kill ring."
|
|
(interactive "P")
|
|
(let* ((info (or info (org-babel-get-src-block-info (not arg))))
|
|
(lang (nth 0 info))
|
|
(body (nth 1 info))
|
|
(params (nth 2 info))
|
|
(session (cdr (assq :session params)))
|
|
(dir (cdr (assq :dir params)))
|
|
(default-directory
|
|
(or (and dir (file-name-as-directory dir)) default-directory))
|
|
(init-cmd (intern (format "org-babel-%s-initiate-session" lang)))
|
|
(prep-cmd (intern (concat "org-babel-prep-session:" lang))))
|
|
(when (and (stringp session) (string= session "none"))
|
|
(error "This block is not using a session!"))
|
|
(unless (fboundp init-cmd)
|
|
(error "No org-babel-initiate-session function for %s!" lang))
|
|
(with-temp-buffer (insert (org-trim body))
|
|
(copy-region-as-kill (point-min) (point-max)))
|
|
(when arg
|
|
(unless (fboundp prep-cmd)
|
|
(error "No org-babel-prep-session function for %s!" lang))
|
|
(funcall prep-cmd session params))
|
|
(funcall init-cmd session params)))
|
|
|
|
;;;###autoload
|
|
(defun org-babel-switch-to-session (&optional arg info)
|
|
"Switch to the session of the current code block.
|
|
Uses `org-babel-initiate-session' to start the session. If called
|
|
with a prefix argument then this is passed on to
|
|
`org-babel-initiate-session'."
|
|
(interactive "P")
|
|
(pop-to-buffer (org-babel-initiate-session arg info))
|
|
(end-of-line 1))
|
|
|
|
(defalias 'org-babel-pop-to-session 'org-babel-switch-to-session)
|
|
|
|
(defvar org-src-window-setup)
|
|
|
|
;;;###autoload
|
|
(defun org-babel-switch-to-session-with-code (&optional arg _info)
|
|
"Switch to code buffer and display session."
|
|
(interactive "P")
|
|
(let ((swap-windows
|
|
(lambda ()
|
|
(let ((other-window-buffer (window-buffer (next-window))))
|
|
(set-window-buffer (next-window) (current-buffer))
|
|
(set-window-buffer (selected-window) other-window-buffer))
|
|
(other-window 1)))
|
|
(info (org-babel-get-src-block-info))
|
|
(org-src-window-setup 'reorganize-frame))
|
|
(save-excursion
|
|
(org-babel-switch-to-session arg info))
|
|
(org-edit-src-code)
|
|
(funcall swap-windows)))
|
|
|
|
;;;###autoload
|
|
(defmacro org-babel-do-in-edit-buffer (&rest body)
|
|
"Evaluate BODY in edit buffer if there is a code block at point.
|
|
Return t if a code block was found at point, nil otherwise."
|
|
(declare (debug (body)))
|
|
`(let* ((element (org-element-at-point))
|
|
;; This function is not supposed to move point. However,
|
|
;; `org-edit-src-code' always moves point back into the
|
|
;; source block. It is problematic if the point was before
|
|
;; the code, e.g., on block's opening line. In this case,
|
|
;; we want to restore this location after executing BODY.
|
|
(outside-position
|
|
(and (<= (line-beginning-position)
|
|
(org-element-property :post-affiliated element))
|
|
(point-marker)))
|
|
(org-src-window-setup 'switch-invisibly))
|
|
(when (and (org-babel-where-is-src-block-head element)
|
|
(org-edit-src-code))
|
|
(unwind-protect (progn ,@body)
|
|
(org-edit-src-exit)
|
|
(when outside-position (goto-char outside-position)))
|
|
t)))
|
|
|
|
(defun org-babel-do-key-sequence-in-edit-buffer (key)
|
|
"Read key sequence and execute the command in edit buffer.
|
|
Enter a key sequence to be executed in the language major-mode
|
|
edit buffer. For example, TAB will alter the contents of the
|
|
Org code block according to the effect of TAB in the language
|
|
major mode buffer. For languages that support interactive
|
|
sessions, this can be used to send code from the Org buffer
|
|
to the session for evaluation using the native major mode
|
|
evaluation mechanisms."
|
|
(interactive "kEnter key-sequence to execute in edit buffer: ")
|
|
(org-babel-do-in-edit-buffer
|
|
(call-interactively
|
|
(key-binding (or key (read-key-sequence nil))))))
|
|
|
|
(defvar org-link-bracket-re)
|
|
|
|
(defun org-babel-active-location-p ()
|
|
(memq (org-element-type (save-match-data (org-element-context)))
|
|
'(babel-call inline-babel-call inline-src-block src-block)))
|
|
|
|
;;;###autoload
|
|
(defun org-babel-open-src-block-result (&optional re-run)
|
|
"Open results of source block at point.
|
|
|
|
If `point' is on a source block then open the results of the source
|
|
code block, otherwise return nil. With optional prefix argument
|
|
RE-RUN the source-code block is evaluated even if results already
|
|
exist."
|
|
(interactive "P")
|
|
(pcase (org-babel-get-src-block-info 'light)
|
|
(`(,_ ,_ ,arguments ,_ ,_ ,start ,_)
|
|
(save-excursion
|
|
;; Go to the results, if there aren't any then run the block.
|
|
(goto-char start)
|
|
(goto-char (or (and (not re-run) (org-babel-where-is-src-block-result))
|
|
(progn (org-babel-execute-src-block)
|
|
(org-babel-where-is-src-block-result))))
|
|
(end-of-line)
|
|
(skip-chars-forward " \r\t\n")
|
|
;; Open the results.
|
|
(if (looking-at org-link-bracket-re) (org-open-at-point)
|
|
(let ((r (org-babel-format-result (org-babel-read-result)
|
|
(cdr (assq :sep arguments)))))
|
|
(pop-to-buffer (get-buffer-create "*Org Babel Results*"))
|
|
(erase-buffer)
|
|
(insert r)))
|
|
t))
|
|
(_ nil)))
|
|
|
|
;;;###autoload
|
|
(defmacro org-babel-map-src-blocks (file &rest body)
|
|
"Evaluate BODY forms on each source-block in FILE.
|
|
If FILE is nil evaluate BODY forms on source blocks in current
|
|
buffer. During evaluation of BODY the following local variables
|
|
are set relative to the currently matched code block.
|
|
|
|
full-block ------- string holding the entirety of the code block
|
|
beg-block -------- point at the beginning of the code block
|
|
end-block -------- point at the end of the matched code block
|
|
lang ------------- string holding the language of the code block
|
|
beg-lang --------- point at the beginning of the lang
|
|
end-lang --------- point at the end of the lang
|
|
switches --------- string holding the switches
|
|
beg-switches ----- point at the beginning of the switches
|
|
end-switches ----- point at the end of the switches
|
|
header-args ------ string holding the header-args
|
|
beg-header-args -- point at the beginning of the header-args
|
|
end-header-args -- point at the end of the header-args
|
|
body ------------- string holding the body of the code block
|
|
beg-body --------- point at the beginning of the body
|
|
end-body --------- point at the end of the body"
|
|
(declare (indent 1))
|
|
(let ((tempvar (make-symbol "file")))
|
|
`(let* ((case-fold-search t)
|
|
(,tempvar ,file)
|
|
(visited-p (or (null ,tempvar)
|
|
(get-file-buffer (expand-file-name ,tempvar))))
|
|
(point (point)) to-be-removed)
|
|
(save-window-excursion
|
|
(when ,tempvar (find-file ,tempvar))
|
|
(setq to-be-removed (current-buffer))
|
|
(goto-char (point-min))
|
|
(while (re-search-forward org-babel-src-block-regexp nil t)
|
|
(when (org-babel-active-location-p)
|
|
(goto-char (match-beginning 0))
|
|
(let ((full-block (match-string 0))
|
|
(beg-block (match-beginning 0))
|
|
(end-block (match-end 0))
|
|
(lang (match-string 2))
|
|
(beg-lang (match-beginning 2))
|
|
(end-lang (match-end 2))
|
|
(switches (match-string 3))
|
|
(beg-switches (match-beginning 3))
|
|
(end-switches (match-end 3))
|
|
(header-args (match-string 4))
|
|
(beg-header-args (match-beginning 4))
|
|
(end-header-args (match-end 4))
|
|
(body (match-string 5))
|
|
(beg-body (match-beginning 5))
|
|
(end-body (match-end 5)))
|
|
;; Silence byte-compiler in case `body' doesn't use all
|
|
;; those variables.
|
|
(ignore full-block beg-block end-block lang
|
|
beg-lang end-lang switches beg-switches
|
|
end-switches header-args beg-header-args
|
|
end-header-args body beg-body end-body)
|
|
,@body
|
|
(goto-char end-block)))))
|
|
(unless visited-p (kill-buffer to-be-removed))
|
|
(goto-char point))))
|
|
(def-edebug-spec org-babel-map-src-blocks (form body))
|
|
|
|
;;;###autoload
|
|
(defmacro org-babel-map-inline-src-blocks (file &rest body)
|
|
"Evaluate BODY forms on each inline source block in FILE.
|
|
If FILE is nil evaluate BODY forms on source blocks in current
|
|
buffer."
|
|
(declare (indent 1) (debug (form body)))
|
|
(org-with-gensyms (datum end point tempvar to-be-removed visitedp)
|
|
`(let* ((case-fold-search t)
|
|
(,tempvar ,file)
|
|
(,visitedp (or (null ,tempvar)
|
|
(get-file-buffer (expand-file-name ,tempvar))))
|
|
(,point (point))
|
|
,to-be-removed)
|
|
(save-window-excursion
|
|
(when ,tempvar (find-file ,tempvar))
|
|
(setq ,to-be-removed (current-buffer))
|
|
(goto-char (point-min))
|
|
(while (re-search-forward "src_\\S-" nil t)
|
|
(let ((,datum (save-match-data (org-element-context))))
|
|
(when (eq (org-element-type ,datum) 'inline-src-block)
|
|
(goto-char (match-beginning 0))
|
|
(let ((,end (copy-marker (org-element-property :end ,datum))))
|
|
,@body
|
|
(goto-char ,end)
|
|
(set-marker ,end nil))))))
|
|
(unless ,visitedp (kill-buffer ,to-be-removed))
|
|
(goto-char ,point))))
|
|
|
|
;;;###autoload
|
|
(defmacro org-babel-map-call-lines (file &rest body)
|
|
"Evaluate BODY forms on each call line in FILE.
|
|
If FILE is nil evaluate BODY forms on source blocks in current
|
|
buffer."
|
|
(declare (indent 1) (debug (form body)))
|
|
(org-with-gensyms (datum end point tempvar to-be-removed visitedp)
|
|
`(let* ((case-fold-search t)
|
|
(,tempvar ,file)
|
|
(,visitedp (or (null ,tempvar)
|
|
(get-file-buffer (expand-file-name ,tempvar))))
|
|
(,point (point))
|
|
,to-be-removed)
|
|
(save-window-excursion
|
|
(when ,tempvar (find-file ,tempvar))
|
|
(setq ,to-be-removed (current-buffer))
|
|
(goto-char (point-min))
|
|
(while (re-search-forward "call_\\S-\\|^[ \t]*#\\+CALL:" nil t)
|
|
(let ((,datum (save-match-data (org-element-context))))
|
|
(when (memq (org-element-type ,datum)
|
|
'(babel-call inline-babel-call))
|
|
(goto-char (match-beginning 0))
|
|
(let ((,end (copy-marker (org-element-property :end ,datum))))
|
|
,@body
|
|
(goto-char ,end)
|
|
(set-marker ,end nil))))))
|
|
(unless ,visitedp (kill-buffer ,to-be-removed))
|
|
(goto-char ,point))))
|
|
|
|
;;;###autoload
|
|
(defmacro org-babel-map-executables (file &rest body)
|
|
"Evaluate BODY forms on each active Babel code in FILE.
|
|
If FILE is nil evaluate BODY forms on source blocks in current
|
|
buffer."
|
|
(declare (indent 1) (debug (form body)))
|
|
(org-with-gensyms (datum end point tempvar to-be-removed visitedp)
|
|
`(let* ((case-fold-search t)
|
|
(,tempvar ,file)
|
|
(,visitedp (or (null ,tempvar)
|
|
(get-file-buffer (expand-file-name ,tempvar))))
|
|
(,point (point))
|
|
,to-be-removed)
|
|
(save-window-excursion
|
|
(when ,tempvar (find-file ,tempvar))
|
|
(setq ,to-be-removed (current-buffer))
|
|
(goto-char (point-min))
|
|
(while (re-search-forward
|
|
"\\(call\\|src\\)_\\|^[ \t]*#\\+\\(BEGIN_SRC\\|CALL:\\)" nil t)
|
|
(let ((,datum (save-match-data (org-element-context))))
|
|
(when (memq (org-element-type ,datum)
|
|
'(babel-call inline-babel-call inline-src-block
|
|
src-block))
|
|
(goto-char (match-beginning 0))
|
|
(let ((,end (copy-marker (org-element-property :end ,datum))))
|
|
,@body
|
|
(goto-char ,end)
|
|
(set-marker ,end nil))))))
|
|
(unless ,visitedp (kill-buffer ,to-be-removed))
|
|
(goto-char ,point))))
|
|
|
|
;;;###autoload
|
|
(defun org-babel-execute-buffer (&optional arg)
|
|
"Execute source code blocks in a buffer.
|
|
Call `org-babel-execute-src-block' on every source block in
|
|
the current buffer."
|
|
(interactive "P")
|
|
(org-babel-eval-wipe-error-buffer)
|
|
(org-save-outline-visibility t
|
|
(org-babel-map-executables nil
|
|
(if (memq (org-element-type (org-element-context))
|
|
'(babel-call inline-babel-call))
|
|
(org-babel-lob-execute-maybe)
|
|
(org-babel-execute-src-block arg)))))
|
|
|
|
;;;###autoload
|
|
(defun org-babel-execute-subtree (&optional arg)
|
|
"Execute source code blocks in a subtree.
|
|
Call `org-babel-execute-src-block' on every source block in
|
|
the current subtree."
|
|
(interactive "P")
|
|
(save-restriction
|
|
(save-excursion
|
|
(org-narrow-to-subtree)
|
|
(org-babel-execute-buffer arg)
|
|
(widen))))
|
|
|
|
;;;###autoload
|
|
(defun org-babel-sha1-hash (&optional info context)
|
|
"Generate a sha1 hash based on the value of INFO.
|
|
CONTEXT specifies the context of evaluation. It can be `:eval',
|
|
`:export', `:tangle'. A nil value means `:eval'."
|
|
(interactive)
|
|
(let ((print-level nil)
|
|
(info (or info (org-babel-get-src-block-info)))
|
|
(context (or context :eval)))
|
|
(setf (nth 2 info)
|
|
(sort (copy-sequence (nth 2 info))
|
|
(lambda (a b) (string< (car a) (car b)))))
|
|
(let* ((rm (lambda (lst)
|
|
(dolist (p '("replace" "silent" "none"
|
|
"append" "prepend"))
|
|
(setq lst (remove p lst)))
|
|
lst))
|
|
(norm (lambda (arg)
|
|
(let ((v (if (and (listp (cdr arg)) (null (cddr arg)))
|
|
(copy-sequence (cdr arg))
|
|
(cdr arg))))
|
|
(when (and v (not (and (sequencep v)
|
|
(not (consp v))
|
|
(= (length v) 0))))
|
|
(cond
|
|
((and (listp v) ; lists are sorted
|
|
(member (car arg) '(:result-params)))
|
|
(sort (funcall rm v) #'string<))
|
|
((and (stringp v) ; strings are sorted
|
|
(member (car arg) '(:results :exports)))
|
|
(mapconcat #'identity (sort (funcall rm (split-string v))
|
|
#'string<) " "))
|
|
(t v))))))
|
|
;; expanded body
|
|
(lang (nth 0 info))
|
|
(params (nth 2 info))
|
|
(body (if (org-babel-noweb-p params context)
|
|
(org-babel-expand-noweb-references info)
|
|
(nth 1 info)))
|
|
(expand-cmd (intern (concat "org-babel-expand-body:" lang)))
|
|
(assignments-cmd (intern (concat "org-babel-variable-assignments:"
|
|
lang)))
|
|
(expanded
|
|
(if (fboundp expand-cmd) (funcall expand-cmd body params)
|
|
(org-babel-expand-body:generic
|
|
body params (and (fboundp assignments-cmd)
|
|
(funcall assignments-cmd params))))))
|
|
(let* ((it (format "%s-%s"
|
|
(mapconcat
|
|
#'identity
|
|
(delq nil (mapcar (lambda (arg)
|
|
(let ((normalized (funcall norm arg)))
|
|
(when normalized
|
|
(format "%S" normalized))))
|
|
(nth 2 info))) ":")
|
|
expanded))
|
|
(hash (sha1 it)))
|
|
(when (called-interactively-p 'interactive) (message hash))
|
|
hash))))
|
|
|
|
(defun org-babel-current-result-hash (&optional info)
|
|
"Return the current in-buffer hash."
|
|
(let ((result (org-babel-where-is-src-block-result nil info)))
|
|
(when result
|
|
(org-with-wide-buffer
|
|
(goto-char result)
|
|
(looking-at org-babel-result-regexp)
|
|
(match-string-no-properties 1)))))
|
|
|
|
(defun org-babel-hide-hash ()
|
|
"Hide the hash in the current results line.
|
|
Only the initial `org-babel-hash-show' characters of the hash
|
|
will remain visible."
|
|
(add-to-invisibility-spec '(org-babel-hide-hash . t))
|
|
(save-excursion
|
|
(when (and (re-search-forward org-babel-result-regexp nil t)
|
|
(match-string 1))
|
|
(let* ((start (match-beginning 1))
|
|
(hide-start (+ org-babel-hash-show start))
|
|
(end (match-end 1))
|
|
(hash (match-string 1))
|
|
ov1 ov2)
|
|
(setq ov1 (make-overlay start hide-start))
|
|
(setq ov2 (make-overlay hide-start end))
|
|
(overlay-put ov2 'invisible 'org-babel-hide-hash)
|
|
(overlay-put ov1 'babel-hash hash)))))
|
|
|
|
(defun org-babel-hide-all-hashes ()
|
|
"Hide the hash in the current buffer.
|
|
Only the initial `org-babel-hash-show' characters of each hash
|
|
will remain visible. This function should be called as part of
|
|
the `org-mode-hook'."
|
|
(save-excursion
|
|
(while (and (not org-babel-hash-show-time)
|
|
(re-search-forward org-babel-result-regexp nil t))
|
|
(goto-char (match-beginning 0))
|
|
(org-babel-hide-hash)
|
|
(goto-char (match-end 0)))))
|
|
(add-hook 'org-mode-hook 'org-babel-hide-all-hashes)
|
|
|
|
(defun org-babel-hash-at-point (&optional point)
|
|
"Return the value of the hash at POINT.
|
|
\\<org-mode-map>\
|
|
The hash is also added as the last element of the kill ring.
|
|
This can be called with `\\[org-ctrl-c-ctrl-c]'."
|
|
(interactive)
|
|
(let ((hash (car (delq nil (mapcar
|
|
(lambda (ol) (overlay-get ol 'babel-hash))
|
|
(overlays-at (or point (point))))))))
|
|
(when hash (kill-new hash) (message hash))))
|
|
|
|
(defun org-babel-result-hide-spec ()
|
|
"Hide portions of results lines.
|
|
Add `org-babel-hide-result' as an invisibility spec for hiding
|
|
portions of results lines."
|
|
(add-to-invisibility-spec '(org-babel-hide-result . t)))
|
|
(add-hook 'org-mode-hook 'org-babel-result-hide-spec)
|
|
|
|
(defvar org-babel-hide-result-overlays nil
|
|
"Overlays hiding results.")
|
|
|
|
(defun org-babel-result-hide-all ()
|
|
"Fold all results in the current buffer."
|
|
(interactive)
|
|
(org-babel-show-result-all)
|
|
(save-excursion
|
|
(while (re-search-forward org-babel-result-regexp nil t)
|
|
(save-excursion (goto-char (match-beginning 0))
|
|
(org-babel-hide-result-toggle-maybe)))))
|
|
|
|
(defun org-babel-show-result-all ()
|
|
"Unfold all results in the current buffer."
|
|
(mapc 'delete-overlay org-babel-hide-result-overlays)
|
|
(setq org-babel-hide-result-overlays nil))
|
|
|
|
;;;###autoload
|
|
(defun org-babel-hide-result-toggle-maybe ()
|
|
"Toggle visibility of result at point."
|
|
(interactive)
|
|
(let ((case-fold-search t))
|
|
(if (save-excursion
|
|
(beginning-of-line 1)
|
|
(looking-at org-babel-result-regexp))
|
|
(progn (org-babel-hide-result-toggle)
|
|
t) ;; to signal that we took action
|
|
nil))) ;; to signal that we did not
|
|
|
|
(defun org-babel-hide-result-toggle (&optional force)
|
|
"Toggle the visibility of the current result."
|
|
(interactive)
|
|
(save-excursion
|
|
(beginning-of-line)
|
|
(if (re-search-forward org-babel-result-regexp nil t)
|
|
(let ((start (progn (beginning-of-line 2) (- (point) 1)))
|
|
(end (progn
|
|
(while (looking-at org-babel-multi-line-header-regexp)
|
|
(forward-line 1))
|
|
(goto-char (- (org-babel-result-end) 1)) (point)))
|
|
ov)
|
|
(if (memq t (mapcar (lambda (overlay)
|
|
(eq (overlay-get overlay 'invisible)
|
|
'org-babel-hide-result))
|
|
(overlays-at start)))
|
|
(when (or (not force) (eq force 'off))
|
|
(mapc (lambda (ov)
|
|
(when (member ov org-babel-hide-result-overlays)
|
|
(setq org-babel-hide-result-overlays
|
|
(delq ov org-babel-hide-result-overlays)))
|
|
(when (eq (overlay-get ov 'invisible)
|
|
'org-babel-hide-result)
|
|
(delete-overlay ov)))
|
|
(overlays-at start)))
|
|
(setq ov (make-overlay start end))
|
|
(overlay-put ov 'invisible 'org-babel-hide-result)
|
|
;; make the block accessible to isearch
|
|
(overlay-put
|
|
ov 'isearch-open-invisible
|
|
(lambda (ov)
|
|
(when (member ov org-babel-hide-result-overlays)
|
|
(setq org-babel-hide-result-overlays
|
|
(delq ov org-babel-hide-result-overlays)))
|
|
(when (eq (overlay-get ov 'invisible)
|
|
'org-babel-hide-result)
|
|
(delete-overlay ov))))
|
|
(push ov org-babel-hide-result-overlays)))
|
|
(error "Not looking at a result line"))))
|
|
|
|
;; org-tab-after-check-for-cycling-hook
|
|
(add-hook 'org-tab-first-hook 'org-babel-hide-result-toggle-maybe)
|
|
;; Remove overlays when changing major mode
|
|
(add-hook 'org-mode-hook
|
|
(lambda () (add-hook 'change-major-mode-hook
|
|
'org-babel-show-result-all 'append 'local)))
|
|
|
|
(defun org-babel-params-from-properties (&optional lang no-eval)
|
|
"Retrieve source block parameters specified as properties.
|
|
|
|
LANG is the language of the source block, as a string. When
|
|
optional argument NO-EVAL is non-nil, do not evaluate Lisp values
|
|
in parameters.
|
|
|
|
Return a list of association lists of source block parameters
|
|
specified in the properties of the current outline entry."
|
|
(save-match-data
|
|
(list
|
|
;; Header arguments specified with the header-args property at
|
|
;; point of call.
|
|
(org-babel-parse-header-arguments
|
|
(org-entry-get (point) "header-args" 'inherit)
|
|
no-eval)
|
|
;; Language-specific header arguments at point of call.
|
|
(and lang
|
|
(org-babel-parse-header-arguments
|
|
(org-entry-get (point) (concat "header-args:" lang) 'inherit)
|
|
no-eval)))))
|
|
|
|
(defun org-babel-balanced-split (string alts)
|
|
"Split STRING on instances of ALTS.
|
|
ALTS is a character, or cons of two character options where each
|
|
option may be either the numeric code of a single character or
|
|
a list of character alternatives. For example, to split on
|
|
balanced instances of \"[ \t]:\", set ALTS to ((32 9) . 58)."
|
|
(with-temp-buffer
|
|
(insert string)
|
|
(goto-char (point-min))
|
|
(let ((splitp (lambda (past next)
|
|
;; Non-nil when there should be a split after NEXT
|
|
;; character. PAST is the character before NEXT.
|
|
(pcase alts
|
|
(`(,(and first (pred consp)) . ,(and second (pred consp)))
|
|
(and (memq past first) (memq next second)))
|
|
(`(,first . ,(and second (pred consp)))
|
|
(and (eq past first) (memq next second)))
|
|
(`(,(and first (pred consp)) . ,second)
|
|
(and (memq past first) (eq next second)))
|
|
(`(,first . ,second)
|
|
(and (eq past first) (eq next second)))
|
|
((pred (eq next)) t)
|
|
(_ nil))))
|
|
(partial nil)
|
|
(result nil))
|
|
(while (not (eobp))
|
|
(cond
|
|
((funcall splitp (char-before) (char-after))
|
|
;; There is a split after point. If ALTS is two-folds,
|
|
;; remove last parsed character as it belongs to ALTS.
|
|
(when (consp alts) (pop partial))
|
|
;; Include elements parsed so far in RESULTS and flush
|
|
;; partial parsing.
|
|
(when partial
|
|
(push (apply #'string (nreverse partial)) result)
|
|
(setq partial nil))
|
|
(forward-char))
|
|
((memq (char-after) '(?\( ?\[))
|
|
;; Include everything between balanced brackets.
|
|
(let* ((origin (point))
|
|
(after (char-after))
|
|
(openings (list after)))
|
|
(forward-char)
|
|
(while (and openings (re-search-forward "[]()]" nil t))
|
|
(pcase (char-before)
|
|
((and match (or ?\[ ?\()) (push match openings))
|
|
(?\] (when (eq ?\[ (car openings)) (pop openings)))
|
|
(_ (when (eq ?\( (car openings)) (pop openings)))))
|
|
(if (null openings)
|
|
(setq partial
|
|
(nconc (nreverse (string-to-list
|
|
(buffer-substring origin (point))))
|
|
partial))
|
|
;; Un-balanced bracket. Backtrack.
|
|
(push after partial)
|
|
(goto-char (1+ origin)))))
|
|
((and (eq ?\" (char-after)) (not (eq ?\\ (char-before))))
|
|
;; Include everything from current double quote to next
|
|
;; non-escaped double quote.
|
|
(let ((origin (point)))
|
|
(if (re-search-forward "[^\\]\"" nil t)
|
|
(setq partial
|
|
(nconc (nreverse (string-to-list
|
|
(buffer-substring origin (point))))
|
|
partial))
|
|
;; No closing double quote. Backtrack.
|
|
(push ?\" partial)
|
|
(forward-char))))
|
|
(t (push (char-after) partial)
|
|
(forward-char))))
|
|
;; Add pending parsing and return result.
|
|
(when partial (push (apply #'string (nreverse partial)) result))
|
|
(nreverse result))))
|
|
|
|
(defun org-babel-join-splits-near-ch (ch list)
|
|
"Join splits where \"=\" is on either end of the split."
|
|
(let ((last= (lambda (str) (= ch (aref str (1- (length str))))))
|
|
(first= (lambda (str) (= ch (aref str 0)))))
|
|
(reverse
|
|
(cl-reduce (lambda (acc el)
|
|
(let ((head (car acc)))
|
|
(if (and head (or (funcall last= head) (funcall first= el)))
|
|
(cons (concat head el) (cdr acc))
|
|
(cons el acc))))
|
|
list :initial-value nil))))
|
|
|
|
(defun org-babel-parse-header-arguments (string &optional no-eval)
|
|
"Parse header arguments in STRING.
|
|
When optional argument NO-EVAL is non-nil, do not evaluate Lisp
|
|
in parameters. Return an alist."
|
|
(when (org-string-nw-p string)
|
|
(org-babel-parse-multiple-vars
|
|
(delq nil
|
|
(mapcar
|
|
(lambda (arg)
|
|
(if (string-match
|
|
"\\([^ \f\t\n\r\v]+\\)[ \f\t\n\r\v]+\\([^ \f\t\n\r\v]+.*\\)"
|
|
arg)
|
|
(cons (intern (match-string 1 arg))
|
|
(org-babel-read (org-babel-chomp (match-string 2 arg))
|
|
no-eval))
|
|
(cons (intern (org-babel-chomp arg)) nil)))
|
|
(let ((raw (org-babel-balanced-split string '((32 9) . 58))))
|
|
(cons (car raw)
|
|
(mapcar (lambda (r) (concat ":" r)) (cdr raw)))))))))
|
|
|
|
(defun org-babel-parse-multiple-vars (header-arguments)
|
|
"Expand multiple variable assignments behind a single :var keyword.
|
|
|
|
This allows expression of multiple variables with one :var as
|
|
shown below.
|
|
|
|
#+PROPERTY: var foo=1, bar=2"
|
|
(let (results)
|
|
(mapc (lambda (pair)
|
|
(if (eq (car pair) :var)
|
|
(mapcar (lambda (v) (push (cons :var (org-trim v)) results))
|
|
(org-babel-join-splits-near-ch
|
|
61 (org-babel-balanced-split (cdr pair) 32)))
|
|
(push pair results)))
|
|
header-arguments)
|
|
(nreverse results)))
|
|
|
|
(defun org-babel-process-params (params)
|
|
"Expand variables in PARAMS and add summary parameters."
|
|
(let* ((processed-vars (mapcar (lambda (el)
|
|
(if (consp el)
|
|
el
|
|
(org-babel-ref-parse el)))
|
|
(org-babel--get-vars params)))
|
|
(vars-and-names (if (and (assq :colname-names params)
|
|
(assq :rowname-names params))
|
|
(list processed-vars)
|
|
(org-babel-disassemble-tables
|
|
processed-vars
|
|
(cdr (assq :hlines params))
|
|
(cdr (assq :colnames params))
|
|
(cdr (assq :rownames params)))))
|
|
(raw-result (or (cdr (assq :results params)) ""))
|
|
(result-params (delete-dups
|
|
(append
|
|
(split-string (if (stringp raw-result)
|
|
raw-result
|
|
(eval raw-result t)))
|
|
(cdr (assq :result-params params))))))
|
|
(append
|
|
(mapcar (lambda (var) (cons :var var)) (car vars-and-names))
|
|
(list
|
|
(cons :colname-names (or (cdr (assq :colname-names params))
|
|
(cadr vars-and-names)))
|
|
(cons :rowname-names (or (cdr (assq :rowname-names params))
|
|
(cl-caddr vars-and-names)))
|
|
(cons :result-params result-params)
|
|
(cons :result-type (cond ((member "output" result-params) 'output)
|
|
((member "value" result-params) 'value)
|
|
(t 'value))))
|
|
(cl-remove-if
|
|
(lambda (x) (memq (car x) '(:colname-names :rowname-names :result-params
|
|
:result-type :var)))
|
|
params))))
|
|
|
|
;; row and column names
|
|
(defun org-babel-del-hlines (table)
|
|
"Remove all `hline's from TABLE."
|
|
(remq 'hline table))
|
|
|
|
(defun org-babel-get-colnames (table)
|
|
"Return the column names of TABLE.
|
|
Return a cons cell, the `car' of which contains the TABLE less
|
|
colnames, and the `cdr' of which contains a list of the column
|
|
names."
|
|
(if (eq 'hline (nth 1 table))
|
|
(cons (cddr table) (car table))
|
|
(cons (cdr table) (car table))))
|
|
|
|
(defun org-babel-get-rownames (table)
|
|
"Return the row names of TABLE.
|
|
Return a cons cell, the `car' of which contains the TABLE less
|
|
rownames, and the `cdr' of which contains a list of the rownames.
|
|
Note: this function removes any hlines in TABLE."
|
|
(let* ((table (org-babel-del-hlines table))
|
|
(rownames (funcall (lambda ()
|
|
(let ((tp table))
|
|
(mapcar
|
|
(lambda (_row)
|
|
(prog1
|
|
(pop (car tp))
|
|
(setq tp (cdr tp))))
|
|
table))))))
|
|
(cons table rownames)))
|
|
|
|
(defun org-babel-put-colnames (table colnames)
|
|
"Add COLNAMES to TABLE if they exist."
|
|
(if colnames (apply 'list colnames 'hline table) table))
|
|
|
|
(defun org-babel-put-rownames (table rownames)
|
|
"Add ROWNAMES to TABLE if they exist."
|
|
(if rownames
|
|
(mapcar (lambda (row)
|
|
(if (listp row)
|
|
(cons (or (pop rownames) "") row)
|
|
row)) table)
|
|
table))
|
|
|
|
(defun org-babel-pick-name (names selector)
|
|
"Select one out of an alist of row or column names.
|
|
SELECTOR can be either a list of names in which case those names
|
|
will be returned directly, or an index into the list NAMES in
|
|
which case the indexed names will be return."
|
|
(if (listp selector)
|
|
selector
|
|
(when names
|
|
(if (and selector (symbolp selector) (not (equal t selector)))
|
|
(cdr (assoc selector names))
|
|
(if (integerp selector)
|
|
(nth (- selector 1) names)
|
|
(cdr (car (last names))))))))
|
|
|
|
(defun org-babel-disassemble-tables (vars hlines colnames rownames)
|
|
"Parse tables for further processing.
|
|
Process the variables in VARS according to the HLINES,
|
|
ROWNAMES and COLNAMES header arguments. Return a list consisting
|
|
of the vars, cnames and rnames."
|
|
(let (cnames rnames)
|
|
(list
|
|
(mapcar
|
|
(lambda (var)
|
|
(when (listp (cdr var))
|
|
(when (and (not (equal colnames "no"))
|
|
(or colnames (and (eq (nth 1 (cdr var)) 'hline)
|
|
(not (member 'hline (cddr (cdr var)))))))
|
|
(let ((both (org-babel-get-colnames (cdr var))))
|
|
(setq cnames (cons (cons (car var) (cdr both))
|
|
cnames))
|
|
(setq var (cons (car var) (car both)))))
|
|
(when (and rownames (not (equal rownames "no")))
|
|
(let ((both (org-babel-get-rownames (cdr var))))
|
|
(setq rnames (cons (cons (car var) (cdr both))
|
|
rnames))
|
|
(setq var (cons (car var) (car both)))))
|
|
(when (and hlines (not (equal hlines "yes")))
|
|
(setq var (cons (car var) (org-babel-del-hlines (cdr var))))))
|
|
var)
|
|
vars)
|
|
(reverse cnames) (reverse rnames))))
|
|
|
|
(defun org-babel-reassemble-table (table colnames rownames)
|
|
"Add column and row names to a table.
|
|
Given a TABLE and set of COLNAMES and ROWNAMES add the names
|
|
to the table for reinsertion to org-mode."
|
|
(if (listp table)
|
|
(let ((table (if (and rownames (= (length table) (length rownames)))
|
|
(org-babel-put-rownames table rownames) table)))
|
|
(if (and colnames (listp (car table)) (= (length (car table))
|
|
(length colnames)))
|
|
(org-babel-put-colnames table colnames) table))
|
|
table))
|
|
|
|
(defun org-babel-where-is-src-block-head (&optional src-block)
|
|
"Find where the current source block begins.
|
|
|
|
If optional argument SRC-BLOCK is `src-block' type element, find
|
|
its current beginning instead.
|
|
|
|
Return the point at the beginning of the current source block.
|
|
Specifically at the beginning of the #+BEGIN_SRC line. Also set
|
|
match-data relatively to `org-babel-src-block-regexp', which see.
|
|
If the point is not on a source block then return nil."
|
|
(let ((element (or src-block (org-element-at-point))))
|
|
(when (eq (org-element-type element) 'src-block)
|
|
(let ((end (org-element-property :end element)))
|
|
(org-with-wide-buffer
|
|
;; Ensure point is not on a blank line after the block.
|
|
(beginning-of-line)
|
|
(skip-chars-forward " \r\t\n" end)
|
|
(when (< (point) end)
|
|
(prog1 (goto-char (org-element-property :post-affiliated element))
|
|
(looking-at org-babel-src-block-regexp))))))))
|
|
|
|
;;;###autoload
|
|
(defun org-babel-goto-src-block-head ()
|
|
"Go to the beginning of the current code block."
|
|
(interactive)
|
|
(let ((head (org-babel-where-is-src-block-head)))
|
|
(if head (goto-char head) (error "Not currently in a code block"))))
|
|
|
|
;;;###autoload
|
|
(defun org-babel-goto-named-src-block (name)
|
|
"Go to a named source-code block."
|
|
(interactive
|
|
(let ((completion-ignore-case t)
|
|
(case-fold-search t)
|
|
(all-block-names (org-babel-src-block-names)))
|
|
(list (completing-read
|
|
"source-block name: " all-block-names nil t
|
|
(let* ((context (org-element-context))
|
|
(type (org-element-type context))
|
|
(noweb-ref
|
|
(and (memq type '(inline-src-block src-block))
|
|
(org-in-regexp (org-babel-noweb-wrap)))))
|
|
(cond
|
|
(noweb-ref
|
|
(buffer-substring
|
|
(+ (car noweb-ref) (length org-babel-noweb-wrap-start))
|
|
(- (cdr noweb-ref) (length org-babel-noweb-wrap-end))))
|
|
((memq type '(babel-call inline-babel-call)) ;#+CALL:
|
|
(org-element-property :call context))
|
|
((car (org-element-property :results context))) ;#+RESULTS:
|
|
((let ((symbol (thing-at-point 'symbol))) ;Symbol.
|
|
(and symbol
|
|
(member-ignore-case symbol all-block-names)
|
|
symbol)))
|
|
(t "")))))))
|
|
(let ((point (org-babel-find-named-block name)))
|
|
(if point
|
|
;; Taken from `org-open-at-point'.
|
|
(progn (org-mark-ring-push) (goto-char point) (org-show-context))
|
|
(message "source-code block `%s' not found in this buffer" name))))
|
|
|
|
(defun org-babel-find-named-block (name)
|
|
"Find a named source-code block.
|
|
Return the location of the source block identified by source
|
|
NAME, or nil if no such block exists. Set match data according
|
|
to `org-babel-named-src-block-regexp'."
|
|
(save-excursion
|
|
(goto-char (point-min))
|
|
(let ((regexp (org-babel-named-src-block-regexp-for-name name)))
|
|
(or (and (looking-at regexp)
|
|
(progn (goto-char (match-beginning 1))
|
|
(line-beginning-position)))
|
|
(ignore-errors (org-next-block 1 nil regexp))))))
|
|
|
|
(defun org-babel-src-block-names (&optional file)
|
|
"Return the names of source blocks in FILE or the current buffer."
|
|
(with-current-buffer (if file (find-file-noselect file) (current-buffer))
|
|
(org-with-point-at 1
|
|
(let ((regexp "^[ \t]*#\\+begin_src ")
|
|
(case-fold-search t)
|
|
(names nil))
|
|
(while (re-search-forward regexp nil t)
|
|
(let ((element (org-element-at-point)))
|
|
(when (eq 'src-block (org-element-type element))
|
|
(let ((name (org-element-property :name element)))
|
|
(when name (push name names))))))
|
|
names))))
|
|
|
|
;;;###autoload
|
|
(defun org-babel-goto-named-result (name)
|
|
"Go to a named result."
|
|
(interactive
|
|
(let ((completion-ignore-case t))
|
|
(list (completing-read "Source-block name: "
|
|
(org-babel-result-names) nil t))))
|
|
(let ((point (org-babel-find-named-result name)))
|
|
(if point
|
|
;; taken from `org-open-at-point'
|
|
(progn (goto-char point) (org-show-context))
|
|
(message "result `%s' not found in this buffer" name))))
|
|
|
|
(defun org-babel-find-named-result (name)
|
|
"Find a named result.
|
|
Return the location of the result named NAME in the current
|
|
buffer or nil if no such result exists."
|
|
(save-excursion
|
|
(goto-char (point-min))
|
|
(let ((case-fold-search t)
|
|
(re (format "^[ \t]*#\\+%s.*?:[ \t]*%s[ \t]*$"
|
|
org-babel-results-keyword
|
|
(regexp-quote name))))
|
|
(catch :found
|
|
(while (re-search-forward re nil t)
|
|
(let ((element (org-element-at-point)))
|
|
(when (or (eq (org-element-type element) 'keyword)
|
|
(< (point)
|
|
(org-element-property :post-affiliated element)))
|
|
(throw :found (line-beginning-position)))))))))
|
|
|
|
(defun org-babel-result-names (&optional file)
|
|
"Return the names of results in FILE or the current buffer."
|
|
(save-excursion
|
|
(when file (find-file file)) (goto-char (point-min))
|
|
(let ((case-fold-search t) names)
|
|
(while (re-search-forward org-babel-result-w-name-regexp nil t)
|
|
(setq names (cons (match-string-no-properties 9) names)))
|
|
names)))
|
|
|
|
;;;###autoload
|
|
(defun org-babel-next-src-block (&optional arg)
|
|
"Jump to the next source block.
|
|
With optional prefix argument ARG, jump forward ARG many source blocks."
|
|
(interactive "p")
|
|
(org-next-block arg nil org-babel-src-block-regexp))
|
|
|
|
;;;###autoload
|
|
(defun org-babel-previous-src-block (&optional arg)
|
|
"Jump to the previous source block.
|
|
With optional prefix argument ARG, jump backward ARG many source blocks."
|
|
(interactive "p")
|
|
(org-previous-block arg org-babel-src-block-regexp))
|
|
|
|
(defvar org-babel-load-languages)
|
|
|
|
;;;###autoload
|
|
(defun org-babel-mark-block ()
|
|
"Mark current source block."
|
|
(interactive)
|
|
(let ((head (org-babel-where-is-src-block-head)))
|
|
(when head
|
|
(save-excursion
|
|
(goto-char head)
|
|
(looking-at org-babel-src-block-regexp))
|
|
(push-mark (match-end 5) nil t)
|
|
(goto-char (match-beginning 5)))))
|
|
|
|
(defun org-babel-demarcate-block (&optional arg)
|
|
"Wrap or split the code in the region or on the point.
|
|
When called from inside of a code block the current block is
|
|
split. When called from outside of a code block a new code block
|
|
is created. In both cases if the region is demarcated and if the
|
|
region is not active then the point is demarcated."
|
|
(interactive "P")
|
|
(let* ((info (org-babel-get-src-block-info 'light))
|
|
(start (org-babel-where-is-src-block-head))
|
|
(block (and start (match-string 0)))
|
|
(headers (and start (match-string 4)))
|
|
(stars (concat (make-string (or (org-current-level) 1) ?*) " "))
|
|
(lower-case-p (and block
|
|
(let (case-fold-search)
|
|
(string-match-p "#\\+begin_src" block)))))
|
|
(if info
|
|
(mapc
|
|
(lambda (place)
|
|
(save-excursion
|
|
(goto-char place)
|
|
(let ((lang (nth 0 info))
|
|
(indent (make-string (current-indentation) ?\s)))
|
|
(when (string-match "^[[:space:]]*$"
|
|
(buffer-substring (point-at-bol)
|
|
(point-at-eol)))
|
|
(delete-region (point-at-bol) (point-at-eol)))
|
|
(insert (concat
|
|
(if (looking-at "^") "" "\n")
|
|
indent (funcall (if lower-case-p 'downcase 'upcase) "#+end_src\n")
|
|
(if arg stars indent) "\n"
|
|
indent (funcall (if lower-case-p 'downcase 'upcase) "#+begin_src ")
|
|
lang
|
|
(if (> (length headers) 1)
|
|
(concat " " headers) headers)
|
|
(if (looking-at "[\n\r]")
|
|
""
|
|
(concat "\n" (make-string (current-column) ? )))))))
|
|
(move-end-of-line 2))
|
|
(sort (if (org-region-active-p) (list (mark) (point)) (list (point))) #'>))
|
|
(let ((start (point))
|
|
(lang (completing-read
|
|
"Lang: "
|
|
(mapcar #'symbol-name
|
|
(delete-dups
|
|
(append (mapcar #'car org-babel-load-languages)
|
|
(mapcar (lambda (el) (intern (car el)))
|
|
org-src-lang-modes))))))
|
|
(body (delete-and-extract-region
|
|
(if (org-region-active-p) (mark) (point)) (point))))
|
|
(insert (concat (if (looking-at "^") "" "\n")
|
|
(if arg (concat stars "\n") "")
|
|
(funcall (if lower-case-p 'downcase 'upcase) "#+begin_src ")
|
|
lang "\n"
|
|
body
|
|
(if (or (= (length body) 0)
|
|
(string-suffix-p "\r" body)
|
|
(string-suffix-p "\n" body)) "" "\n")
|
|
(funcall (if lower-case-p 'downcase 'upcase) "#+end_src\n")))
|
|
(goto-char start) (move-end-of-line 1)))))
|
|
|
|
(defun org-babel--insert-results-keyword (name hash)
|
|
"Insert RESULTS keyword with NAME value at point.
|
|
If NAME is nil, results are anonymous. HASH is a string used as
|
|
the results hash, or nil. Leave point before the keyword."
|
|
(save-excursion (insert "\n")) ;open line to indent.
|
|
(org-indent-line)
|
|
(delete-char 1)
|
|
(insert (concat "#+" org-babel-results-keyword
|
|
(cond ((not hash) nil)
|
|
(org-babel-hash-show-time
|
|
(format "[%s %s]"
|
|
(format-time-string "<%F %T>")
|
|
hash))
|
|
(t (format "[%s]" hash)))
|
|
":"
|
|
(when name (concat " " name))
|
|
"\n"))
|
|
;; Make sure results are going to be followed by at least one blank
|
|
;; line so they do not get merged with the next element, e.g.,
|
|
;;
|
|
;; #+results:
|
|
;; : 1
|
|
;;
|
|
;; : fixed-width area, unrelated to the above.
|
|
(unless (looking-at "^[ \t]*$") (save-excursion (insert "\n")))
|
|
(beginning-of-line 0)
|
|
(when hash (org-babel-hide-hash)))
|
|
|
|
(defun org-babel--clear-results-maybe (hash)
|
|
"Clear results when hash doesn't match HASH.
|
|
|
|
When results hash does not match HASH, remove RESULTS keyword at
|
|
point, along with related contents. Do nothing if HASH is nil.
|
|
|
|
Return a non-nil value if results were cleared. In this case,
|
|
leave point where new results should be inserted."
|
|
(when hash
|
|
(looking-at org-babel-result-regexp)
|
|
(unless (string= (match-string 1) hash)
|
|
(let* ((e (org-element-at-point))
|
|
(post (copy-marker (org-element-property :post-affiliated e))))
|
|
;; Delete contents.
|
|
(delete-region post
|
|
(save-excursion
|
|
(goto-char (org-element-property :end e))
|
|
(skip-chars-backward " \t\n")
|
|
(line-beginning-position 2)))
|
|
;; Delete RESULT keyword. However, if RESULTS keyword is
|
|
;; orphaned, ignore this part. The deletion above already
|
|
;; took care of it.
|
|
(unless (= (point) post)
|
|
(delete-region (line-beginning-position)
|
|
(line-beginning-position 2)))
|
|
(goto-char post)
|
|
(set-marker post nil)
|
|
t))))
|
|
|
|
(defun org-babel-where-is-src-block-result (&optional insert _info hash)
|
|
"Find where the current source block results begin.
|
|
|
|
Return the point at the beginning of the result of the current
|
|
source block, specifically at the beginning of the results line.
|
|
|
|
If no result exists for this block return nil, unless optional
|
|
argument INSERT is non-nil. In this case, create a results line
|
|
following the source block and return the position at its
|
|
beginning. In the case of inline code, remove the results part
|
|
instead.
|
|
|
|
If optional argument HASH is a string, remove contents related to
|
|
RESULTS keyword if its hash is different. Then update the latter
|
|
to HASH."
|
|
(let ((context (org-element-context)))
|
|
(catch :found
|
|
(org-with-wide-buffer
|
|
(pcase (org-element-type context)
|
|
((or `inline-babel-call `inline-src-block)
|
|
;; Results for inline objects are located right after them.
|
|
;; There is no RESULTS line to insert either.
|
|
(let ((limit (org-element-property
|
|
:contents-end (org-element-property :parent context))))
|
|
(goto-char (org-element-property :end context))
|
|
(skip-chars-forward " \t\n" limit)
|
|
(throw :found
|
|
(and
|
|
(< (point) limit)
|
|
(let ((result (org-element-context)))
|
|
(and (eq (org-element-type result) 'macro)
|
|
(string= (org-element-property :key result)
|
|
"results")
|
|
(if (not insert) (point)
|
|
(delete-region
|
|
(point)
|
|
(progn
|
|
(goto-char (org-element-property :end result))
|
|
(skip-chars-backward " \t")
|
|
(point)))
|
|
(point))))))))
|
|
((or `babel-call `src-block)
|
|
(let* ((name (org-element-property :name context))
|
|
(named-results (and name (org-babel-find-named-result name))))
|
|
(goto-char (or named-results (org-element-property :end context)))
|
|
(cond
|
|
;; Existing results named after the current source.
|
|
(named-results
|
|
(when (org-babel--clear-results-maybe hash)
|
|
(org-babel--insert-results-keyword name hash))
|
|
(throw :found (point)))
|
|
;; Named results expect but none to be found.
|
|
(name)
|
|
;; No possible anonymous results at the very end of
|
|
;; buffer or outside CONTEXT parent.
|
|
((eq (point)
|
|
(or (org-element-property
|
|
:contents-end (org-element-property :parent context))
|
|
(point-max))))
|
|
;; Check if next element is an anonymous result below
|
|
;; the current block.
|
|
((let* ((next (org-element-at-point))
|
|
(end (save-excursion
|
|
(goto-char
|
|
(org-element-property :post-affiliated next))
|
|
(line-end-position)))
|
|
(empty-result-re (concat org-babel-result-regexp "$"))
|
|
(case-fold-search t))
|
|
(re-search-forward empty-result-re end t))
|
|
(beginning-of-line)
|
|
(when (org-babel--clear-results-maybe hash)
|
|
(org-babel--insert-results-keyword nil hash))
|
|
(throw :found (point))))))
|
|
;; Ignore other elements.
|
|
(_ (throw :found nil))))
|
|
;; No result found. Insert a RESULTS keyword below element, if
|
|
;; appropriate. In this case, ensure there is an empty line
|
|
;; after the previous element.
|
|
(when insert
|
|
(save-excursion
|
|
(goto-char (min (org-element-property :end context) (point-max)))
|
|
(skip-chars-backward " \t\n")
|
|
(forward-line)
|
|
(unless (bolp) (insert "\n"))
|
|
(insert "\n")
|
|
(org-babel--insert-results-keyword
|
|
(org-element-property :name context) hash)
|
|
(point))))))
|
|
|
|
(defun org-babel-read-element (element)
|
|
"Read ELEMENT into emacs-lisp.
|
|
Return nil if ELEMENT cannot be read."
|
|
(org-with-wide-buffer
|
|
(goto-char (org-element-property :post-affiliated element))
|
|
(pcase (org-element-type element)
|
|
(`fixed-width
|
|
(let ((v (org-trim (org-element-property :value element))))
|
|
(or (org-babel--string-to-number v) v)))
|
|
(`table (org-babel-read-table))
|
|
(`plain-list (org-babel-read-list))
|
|
(`example-block
|
|
(let ((v (org-element-property :value element)))
|
|
(if (or org-src-preserve-indentation
|
|
(org-element-property :preserve-indent element))
|
|
v
|
|
(org-remove-indentation v))))
|
|
(`export-block
|
|
(org-remove-indentation (org-element-property :value element)))
|
|
(`paragraph
|
|
;; Treat paragraphs containing a single link specially.
|
|
(skip-chars-forward " \t")
|
|
(if (and (looking-at org-link-bracket-re)
|
|
(save-excursion
|
|
(goto-char (match-end 0))
|
|
(skip-chars-forward " \r\t\n")
|
|
(<= (org-element-property :end element)
|
|
(point))))
|
|
(org-babel-read-link)
|
|
(buffer-substring-no-properties
|
|
(org-element-property :contents-begin element)
|
|
(org-element-property :contents-end element))))
|
|
((or `center-block `quote-block `verse-block `special-block)
|
|
(org-remove-indentation
|
|
(buffer-substring-no-properties
|
|
(org-element-property :contents-begin element)
|
|
(org-element-property :contents-end element))))
|
|
(_ nil))))
|
|
|
|
(defun org-babel-read-result ()
|
|
"Read the result at point into emacs-lisp."
|
|
(and (not (save-excursion
|
|
(beginning-of-line)
|
|
(looking-at-p "[ \t]*$")))
|
|
(org-babel-read-element (org-element-at-point))))
|
|
|
|
(defun org-babel-read-table ()
|
|
"Read the table at point into emacs-lisp."
|
|
(mapcar (lambda (row)
|
|
(if (and (symbolp row) (equal row 'hline)) row
|
|
(mapcar (lambda (el) (org-babel-read el 'inhibit-lisp-eval)) row)))
|
|
(org-table-to-lisp)))
|
|
|
|
(defun org-babel-read-list ()
|
|
"Read the list at point into emacs-lisp."
|
|
(mapcar (lambda (el) (org-babel-read el 'inhibit-lisp-eval))
|
|
(cdr (org-list-to-lisp))))
|
|
|
|
(defvar org-link-types-re)
|
|
(defun org-babel-read-link ()
|
|
"Read the link at point into emacs-lisp.
|
|
If the path of the link is a file path it is expanded using
|
|
`expand-file-name'."
|
|
(let* ((case-fold-search t)
|
|
(raw (and (looking-at org-link-bracket-re)
|
|
(org-no-properties (match-string 1))))
|
|
(type (and (string-match org-link-types-re raw)
|
|
(match-string 1 raw))))
|
|
(cond
|
|
((not type) (expand-file-name raw))
|
|
((string= type "file")
|
|
(and (string-match "file\\(.*\\):\\(.+\\)" raw)
|
|
(expand-file-name (match-string 2 raw))))
|
|
(t raw))))
|
|
|
|
(defun org-babel-format-result (result &optional sep)
|
|
"Format RESULT for writing to file."
|
|
(let ((echo-res (lambda (r) (if (stringp r) r (format "%S" r)))))
|
|
(if (listp result)
|
|
;; table result
|
|
(orgtbl-to-generic
|
|
result (list :sep (or sep "\t") :fmt echo-res))
|
|
;; scalar result
|
|
(funcall echo-res result))))
|
|
|
|
(defun org-babel-insert-result (result &optional result-params info hash lang)
|
|
"Insert RESULT into the current buffer.
|
|
|
|
By default RESULT is inserted after the end of the current source
|
|
block. The RESULT of an inline source block usually will be
|
|
wrapped inside a `results' macro and placed on the same line as
|
|
the inline source block. The macro is stripped upon export.
|
|
Multiline and non-scalar RESULTS from inline source blocks are
|
|
not allowed. With optional argument RESULT-PARAMS controls
|
|
insertion of results in the Org mode file. RESULT-PARAMS can
|
|
take the following values:
|
|
|
|
replace - (default option) insert results after the source block
|
|
or inline source block replacing any previously
|
|
inserted results.
|
|
|
|
silent -- no results are inserted into the Org buffer but
|
|
the results are echoed to the minibuffer and are
|
|
ingested by Emacs (a potentially time consuming
|
|
process).
|
|
|
|
file ---- the results are interpreted as a file path, and are
|
|
inserted into the buffer using the Org file syntax.
|
|
|
|
list ---- the results are interpreted as an Org list.
|
|
|
|
raw ----- results are added directly to the Org file. This is
|
|
a good option if you code block will output Org
|
|
formatted text.
|
|
|
|
drawer -- results are added directly to the Org file as with
|
|
\"raw\", but are wrapped in a RESULTS drawer or results
|
|
macro, allowing them to later be replaced or removed
|
|
automatically.
|
|
|
|
org ----- results are added inside of a \"src_org{}\" or \"#+BEGIN_SRC
|
|
org\" block depending on whether the current source block is
|
|
inline or not. They are not comma-escaped when inserted,
|
|
but Org syntax here will be discarded when exporting the
|
|
file.
|
|
|
|
html ---- results are added inside of a #+BEGIN_EXPORT HTML block
|
|
or html export snippet depending on whether the current
|
|
source block is inline or not. This is a good option
|
|
if your code block will output html formatted text.
|
|
|
|
latex --- results are added inside of a #+BEGIN_EXPORT LATEX
|
|
block or latex export snippet depending on whether the
|
|
current source block is inline or not. This is a good
|
|
option if your code block will output latex formatted
|
|
text.
|
|
|
|
code ---- the results are extracted in the syntax of the source
|
|
code of the language being evaluated and are added
|
|
inside of a source block with the source-code language
|
|
set appropriately. Also, source block inlining is
|
|
preserved in this case. Note this relies on the
|
|
optional LANG argument.
|
|
|
|
list ---- the results are rendered as a list. This option not
|
|
allowed for inline source blocks.
|
|
|
|
table --- the results are rendered as a table. This option not
|
|
allowed for inline source blocks.
|
|
|
|
INFO may provide the values of these header arguments (in the
|
|
`header-arguments-alist' see the docstring for
|
|
`org-babel-get-src-block-info'):
|
|
|
|
:file --- the name of the file to which output should be written.
|
|
|
|
:wrap --- the effect is similar to `latex' in RESULT-PARAMS but
|
|
using the argument supplied to specify the export block
|
|
or snippet type."
|
|
(cond ((stringp result)
|
|
(setq result (org-no-properties result))
|
|
(when (member "file" result-params)
|
|
(setq result (org-babel-result-to-file
|
|
result (when (assq :file-desc (nth 2 info))
|
|
(or (cdr (assq :file-desc (nth 2 info)))
|
|
result))))))
|
|
((listp result))
|
|
(t (setq result (format "%S" result))))
|
|
(if (and result-params (member "silent" result-params))
|
|
(progn (message (replace-regexp-in-string "%" "%%" (format "%S" result)))
|
|
result)
|
|
(let ((inline (let ((context (org-element-context)))
|
|
(and (memq (org-element-type context)
|
|
'(inline-babel-call inline-src-block))
|
|
context))))
|
|
(when inline
|
|
(let ((warning
|
|
(or (and (member "table" result-params) "`:results table'")
|
|
(and (listp result) "list result")
|
|
(and (string-match-p "\n." result) "multiline result")
|
|
(and (member "list" result-params) "`:results list'"))))
|
|
(when warning
|
|
(user-error "Inline error: %s cannot be used" warning))))
|
|
(save-excursion
|
|
(let* ((visible-beg (point-min-marker))
|
|
(visible-end (copy-marker (point-max) t))
|
|
(inline (let ((context (org-element-context)))
|
|
(and (memq (org-element-type context)
|
|
'(inline-babel-call inline-src-block))
|
|
context)))
|
|
(existing-result (org-babel-where-is-src-block-result t nil hash))
|
|
(results-switches (cdr (assq :results_switches (nth 2 info))))
|
|
;; When results exist outside of the current visible
|
|
;; region of the buffer, be sure to widen buffer to
|
|
;; update them.
|
|
(outside-scope (and existing-result
|
|
(buffer-narrowed-p)
|
|
(or (> visible-beg existing-result)
|
|
(<= visible-end existing-result))))
|
|
beg end indent)
|
|
;; Ensure non-inline results end in a newline.
|
|
(when (and (org-string-nw-p result)
|
|
(not inline)
|
|
(not (string-equal (substring result -1) "\n")))
|
|
(setq result (concat result "\n")))
|
|
(unwind-protect
|
|
(progn
|
|
(when outside-scope (widen))
|
|
(if existing-result (goto-char existing-result)
|
|
(goto-char (org-element-property :end inline))
|
|
(skip-chars-backward " \t"))
|
|
(unless inline
|
|
(setq indent (current-indentation))
|
|
(forward-line 1))
|
|
(setq beg (point))
|
|
(cond
|
|
(inline
|
|
;; Make sure new results are separated from the
|
|
;; source code by one space.
|
|
(unless existing-result
|
|
(insert " ")
|
|
(setq beg (point))))
|
|
((member "replace" result-params)
|
|
(delete-region (point) (org-babel-result-end)))
|
|
((member "append" result-params)
|
|
(goto-char (org-babel-result-end)) (setq beg (point-marker)))
|
|
((member "prepend" result-params))) ; already there
|
|
(setq results-switches
|
|
(if results-switches (concat " " results-switches) ""))
|
|
(let ((wrap
|
|
(lambda (start finish &optional no-escape no-newlines
|
|
inline-start inline-finish)
|
|
(when inline
|
|
(setq start inline-start)
|
|
(setq finish inline-finish)
|
|
(setq no-newlines t))
|
|
(let ((before-finish (copy-marker end)))
|
|
(goto-char end)
|
|
(insert (concat finish (unless no-newlines "\n")))
|
|
(goto-char beg)
|
|
(insert (concat start (unless no-newlines "\n")))
|
|
(unless no-escape
|
|
(org-escape-code-in-region
|
|
(min (point) before-finish) before-finish))
|
|
(goto-char end))))
|
|
(tabulablep
|
|
(lambda (r)
|
|
;; Non-nil when result R can be turned into
|
|
;; a table.
|
|
(and (proper-list-p r)
|
|
(cl-every
|
|
(lambda (e) (or (atom e) (proper-list-p e)))
|
|
result)))))
|
|
;; insert results based on type
|
|
(cond
|
|
;; Do nothing for an empty result.
|
|
((null result))
|
|
;; Insert a list if preferred.
|
|
((member "list" result-params)
|
|
(insert
|
|
(org-trim
|
|
(org-list-to-generic
|
|
(cons 'unordered
|
|
(mapcar
|
|
(lambda (e)
|
|
(list (if (stringp e) e (format "%S" e))))
|
|
(if (listp result) result
|
|
(split-string result "\n" t))))
|
|
'(:splicep nil :istart "- " :iend "\n")))
|
|
"\n"))
|
|
;; Try hard to print RESULT as a table. Give up if
|
|
;; it contains an improper list.
|
|
((funcall tabulablep result)
|
|
(goto-char beg)
|
|
(insert (concat (orgtbl-to-orgtbl
|
|
(if (cl-every
|
|
(lambda (e)
|
|
(or (eq e 'hline) (listp e)))
|
|
result)
|
|
result
|
|
(list result))
|
|
nil)
|
|
"\n"))
|
|
(goto-char beg)
|
|
(when (org-at-table-p) (org-table-align))
|
|
(goto-char (org-table-end)))
|
|
;; Print verbatim a list that cannot be turned into
|
|
;; a table.
|
|
((listp result) (insert (format "%s\n" result)))
|
|
((member "file" result-params)
|
|
(when inline
|
|
(setq result (org-macro-escape-arguments result)))
|
|
(insert result))
|
|
((and inline (not (member "raw" result-params)))
|
|
(insert (org-macro-escape-arguments
|
|
(org-babel-chomp result "\n"))))
|
|
(t (goto-char beg) (insert result)))
|
|
(setq end (copy-marker (point) t))
|
|
;; possibly wrap result
|
|
(cond
|
|
((assq :wrap (nth 2 info))
|
|
(let ((name (or (cdr (assq :wrap (nth 2 info))) "results")))
|
|
(funcall wrap (concat "#+begin_" name)
|
|
(concat "#+end_" (car (split-string name)))
|
|
nil nil (concat "{{{results(@@" name ":") "@@)}}}")))
|
|
((member "html" result-params)
|
|
(funcall wrap "#+begin_export html" "#+end_export" nil nil
|
|
"{{{results(@@html:" "@@)}}}"))
|
|
((member "latex" result-params)
|
|
(funcall wrap "#+begin_export latex" "#+end_export" nil nil
|
|
"{{{results(@@latex:" "@@)}}}"))
|
|
((member "org" result-params)
|
|
(goto-char beg) (when (org-at-table-p) (org-cycle))
|
|
(funcall wrap "#+begin_src org" "#+end_src" nil nil
|
|
"{{{results(src_org{" "})}}}"))
|
|
((member "code" result-params)
|
|
(let ((lang (or lang "none")))
|
|
(funcall wrap (format "#+begin_src %s%s" lang results-switches)
|
|
"#+end_src" nil nil
|
|
(format "{{{results(src_%s[%s]{" lang results-switches)
|
|
"})}}}")))
|
|
((member "raw" result-params)
|
|
(goto-char beg) (when (org-at-table-p) (org-cycle)))
|
|
((or (member "drawer" result-params)
|
|
;; Stay backward compatible with <7.9.2
|
|
(member "wrap" result-params))
|
|
(goto-char beg) (when (org-at-table-p) (org-cycle))
|
|
(funcall wrap ":results:" ":end:" 'no-escape nil
|
|
"{{{results(" ")}}}"))
|
|
((and inline (member "file" result-params))
|
|
(funcall wrap nil nil nil nil "{{{results(" ")}}}"))
|
|
((and (not (funcall tabulablep result))
|
|
(not (member "file" result-params)))
|
|
(let ((org-babel-inline-result-wrap
|
|
;; Hard code {{{results(...)}}} on top of
|
|
;; customization.
|
|
(format "{{{results(%s)}}}"
|
|
org-babel-inline-result-wrap)))
|
|
(org-babel-examplify-region
|
|
beg end results-switches inline)))))
|
|
;; Possibly indent results in par with #+results line.
|
|
(when (and (not inline) (numberp indent) (> indent 0)
|
|
;; In this case `table-align' does the work
|
|
;; for us.
|
|
(not (and (listp result)
|
|
(member "append" result-params))))
|
|
(indent-rigidly beg end indent))
|
|
(if (null result)
|
|
(if (member "value" result-params)
|
|
(message "Code block returned no value.")
|
|
(message "Code block produced no output."))
|
|
(message "Code block evaluation complete.")))
|
|
(set-marker end nil)
|
|
(when outside-scope (narrow-to-region visible-beg visible-end))
|
|
(set-marker visible-beg nil)
|
|
(set-marker visible-end nil)))))))
|
|
|
|
(defun org-babel-remove-result (&optional info keep-keyword)
|
|
"Remove the result of the current source block."
|
|
(interactive)
|
|
(let ((location (org-babel-where-is-src-block-result nil info)))
|
|
(when location
|
|
(save-excursion
|
|
(goto-char location)
|
|
(when (looking-at (concat org-babel-result-regexp ".*$"))
|
|
(delete-region
|
|
(if keep-keyword (line-beginning-position 2)
|
|
(save-excursion
|
|
(skip-chars-backward " \r\t\n")
|
|
(line-beginning-position 2)))
|
|
(progn (forward-line) (org-babel-result-end))))))))
|
|
|
|
(defun org-babel-remove-inline-result (&optional datum)
|
|
"Remove the result of the current inline-src-block or babel call.
|
|
The result must be wrapped in a `results' macro to be removed.
|
|
Leading white space is trimmed."
|
|
(interactive)
|
|
(let* ((el (or datum (org-element-context))))
|
|
(when (memq (org-element-type el) '(inline-src-block inline-babel-call))
|
|
(org-with-wide-buffer
|
|
(goto-char (org-element-property :end el))
|
|
(skip-chars-backward " \t")
|
|
(let ((result (save-excursion
|
|
(skip-chars-forward
|
|
" \t\n"
|
|
(org-element-property
|
|
:contents-end (org-element-property :parent el)))
|
|
(org-element-context))))
|
|
(when (and (eq (org-element-type result) 'macro)
|
|
(string= (org-element-property :key result) "results"))
|
|
(delete-region ; And leading whitespace.
|
|
(point)
|
|
(progn (goto-char (org-element-property :end result))
|
|
(skip-chars-backward " \t\n")
|
|
(point)))))))))
|
|
|
|
(defun org-babel-remove-result-one-or-many (x)
|
|
"Remove the result of the current source block.
|
|
If called with a prefix argument, remove all result blocks
|
|
in the buffer."
|
|
(interactive "P")
|
|
(if x
|
|
(org-babel-map-src-blocks nil (org-babel-remove-result))
|
|
(org-babel-remove-result)))
|
|
|
|
(defun org-babel-result-end ()
|
|
"Return the point at the end of the current set of results."
|
|
(cond ((looking-at-p "^[ \t]*$") (point)) ;no result
|
|
((looking-at-p (format "^[ \t]*%s[ \t]*$" org-link-bracket-re))
|
|
(line-beginning-position 2))
|
|
(t
|
|
(let ((element (org-element-at-point)))
|
|
(if (memq (org-element-type element)
|
|
;; Possible results types.
|
|
'(drawer example-block export-block fixed-width item
|
|
plain-list src-block table))
|
|
(save-excursion
|
|
(goto-char (min (point-max) ;for narrowed buffers
|
|
(org-element-property :end element)))
|
|
(skip-chars-backward " \r\t\n")
|
|
(line-beginning-position 2))
|
|
(point))))))
|
|
|
|
(defun org-babel-result-to-file (result &optional description)
|
|
"Convert RESULT into an Org link with optional DESCRIPTION.
|
|
If the `default-directory' is different from the containing
|
|
file's directory then expand relative links."
|
|
(when (stringp result)
|
|
(let ((same-directory?
|
|
(and buffer-file-name
|
|
(not (string= (expand-file-name default-directory)
|
|
(expand-file-name
|
|
(file-name-directory buffer-file-name)))))))
|
|
(format "[[file:%s]%s]"
|
|
(if (and default-directory buffer-file-name same-directory?)
|
|
(if (eq org-link-file-path-type 'adaptive)
|
|
(file-relative-name
|
|
(expand-file-name result default-directory)
|
|
(file-name-directory (buffer-file-name)))
|
|
(expand-file-name result default-directory))
|
|
result)
|
|
(if description (concat "[" description "]") "")))))
|
|
|
|
(defun org-babel-examplify-region (beg end &optional results-switches inline)
|
|
"Comment out region using the inline `==' or `: ' org example quote."
|
|
(interactive "*r")
|
|
(let ((maybe-cap
|
|
(lambda (str)
|
|
(if org-babel-uppercase-example-markers (upcase str) str))))
|
|
(if inline
|
|
(save-excursion
|
|
(goto-char beg)
|
|
(insert (format org-babel-inline-result-wrap
|
|
(delete-and-extract-region beg end))))
|
|
(let ((size (count-lines beg end)))
|
|
(save-excursion
|
|
(cond ((= size 0)) ; do nothing for an empty result
|
|
((< size org-babel-min-lines-for-block-output)
|
|
(goto-char beg)
|
|
(dotimes (_ size)
|
|
(beginning-of-line 1) (insert ": ") (forward-line 1)))
|
|
(t
|
|
(goto-char beg)
|
|
(insert (if results-switches
|
|
(format "%s%s\n"
|
|
(funcall maybe-cap "#+begin_example")
|
|
results-switches)
|
|
(funcall maybe-cap "#+begin_example\n")))
|
|
(let ((p (point)))
|
|
(if (markerp end) (goto-char end) (forward-char (- end beg)))
|
|
(org-escape-code-in-region p (point)))
|
|
(insert (funcall maybe-cap "#+end_example\n")))))))))
|
|
|
|
(defun org-babel-update-block-body (new-body)
|
|
"Update the body of the current code block to NEW-BODY."
|
|
(let ((element (org-element-at-point)))
|
|
(unless (eq (org-element-type element) 'src-block)
|
|
(error "Not in a source block"))
|
|
(goto-char (org-babel-where-is-src-block-head element))
|
|
(let* ((ind (current-indentation))
|
|
(body-start (line-beginning-position 2))
|
|
(body (org-element-normalize-string
|
|
(if (or org-src-preserve-indentation
|
|
(org-element-property :preserve-indent element))
|
|
new-body
|
|
(with-temp-buffer
|
|
(insert (org-remove-indentation new-body))
|
|
(indent-rigidly
|
|
(point-min)
|
|
(point-max)
|
|
(+ ind org-edit-src-content-indentation))
|
|
(buffer-string))))))
|
|
(delete-region body-start
|
|
(org-with-wide-buffer
|
|
(goto-char (org-element-property :end element))
|
|
(skip-chars-backward " \t\n")
|
|
(line-beginning-position)))
|
|
(goto-char body-start)
|
|
(insert body))))
|
|
|
|
(defun org-babel-merge-params (&rest plists)
|
|
"Combine all parameter association lists in PLISTS.
|
|
Later elements of PLISTS override the values of previous elements.
|
|
This takes into account some special considerations for certain
|
|
parameters when merging lists."
|
|
(let* ((results-exclusive-groups
|
|
(mapcar (lambda (group) (mapcar #'symbol-name group))
|
|
(cdr (assq 'results org-babel-common-header-args-w-values))))
|
|
(exports-exclusive-groups
|
|
(mapcar (lambda (group) (mapcar #'symbol-name group))
|
|
(cdr (assq 'exports org-babel-common-header-args-w-values))))
|
|
(merge
|
|
(lambda (exclusive-groups &rest result-params)
|
|
;; Maintain exclusivity of mutually exclusive parameters,
|
|
;; as defined in EXCLUSIVE-GROUPS while merging lists in
|
|
;; RESULT-PARAMS.
|
|
(let (output)
|
|
(dolist (new-params result-params (delete-dups output))
|
|
(dolist (new-param new-params)
|
|
(dolist (exclusive-group exclusive-groups)
|
|
(when (member new-param exclusive-group)
|
|
(setq output (cl-remove-if
|
|
(lambda (o) (member o exclusive-group))
|
|
output))))
|
|
(push new-param output))))))
|
|
(variable-index 0) ;Handle positional arguments.
|
|
clearnames
|
|
params ;Final parameters list.
|
|
;; Some keywords accept multiple values. We need to treat
|
|
;; them specially.
|
|
vars results exports)
|
|
(dolist (plist plists)
|
|
(dolist (pair plist)
|
|
(pcase pair
|
|
(`(:var . ,value)
|
|
(let ((name (cond
|
|
((listp value) (car value))
|
|
((string-match "^\\([^= \f\t\n\r\v]+\\)[ \t]*=" value)
|
|
(intern (match-string 1 value)))
|
|
(t nil))))
|
|
(cond
|
|
(name
|
|
(setq vars
|
|
(append (if (not (assoc name vars)) vars
|
|
(push name clearnames)
|
|
(cl-remove-if (lambda (p) (equal name (car p)))
|
|
vars))
|
|
(list (cons name pair)))))
|
|
((and vars (nth variable-index vars))
|
|
;; If no name is given and we already have named
|
|
;; variables then assign to named variables in order.
|
|
(let ((name (car (nth variable-index vars))))
|
|
;; Clear out colnames and rownames for replace vars.
|
|
(push name clearnames)
|
|
(setf (cddr (nth variable-index vars))
|
|
(concat (symbol-name name) "=" value))
|
|
(cl-incf variable-index)))
|
|
(t (error "Variable \"%s\" must be assigned a default value"
|
|
(cdr pair))))))
|
|
(`(:results . ,value)
|
|
(setq results (funcall merge
|
|
results-exclusive-groups
|
|
results
|
|
(split-string
|
|
(if (stringp value) value (eval value t))))))
|
|
(`(:exports . ,value)
|
|
(setq exports (funcall merge
|
|
exports-exclusive-groups
|
|
exports
|
|
(split-string (or value "")))))
|
|
;; Regular keywords: any value overwrites the previous one.
|
|
(_ (setq params (cons pair (assq-delete-all (car pair) params)))))))
|
|
;; Handle `:var' and clear out colnames and rownames for replaced
|
|
;; variables.
|
|
(setq params (nconc (mapcar (lambda (v) (cons :var (cddr v))) vars)
|
|
params))
|
|
(dolist (name clearnames)
|
|
(dolist (param '(:colname-names :rowname-names))
|
|
(when (assq param params)
|
|
(setf (cdr (assq param params))
|
|
(cl-remove-if (lambda (pair) (equal name (car pair)))
|
|
(cdr (assq param params))))
|
|
(setq params
|
|
(cl-remove-if (lambda (pair) (and (equal (car pair) param)
|
|
(null (cdr pair))))
|
|
params)))))
|
|
;; Handle other special keywords, which accept multiple values.
|
|
(setq params (nconc (list (cons :results (mapconcat #'identity results " "))
|
|
(cons :exports (mapconcat #'identity exports " ")))
|
|
params))
|
|
;; Return merged params.
|
|
params))
|
|
|
|
(defun org-babel-noweb-p (params context)
|
|
"Check if PARAMS require expansion in CONTEXT.
|
|
CONTEXT may be one of :tangle, :export or :eval."
|
|
(let ((allowed-values (cl-case context
|
|
(:tangle '("yes" "tangle" "no-export" "strip-export"))
|
|
(:eval '("yes" "no-export" "strip-export" "eval"))
|
|
(:export '("yes")))))
|
|
(cl-some (lambda (v) (member v allowed-values))
|
|
(split-string (or (cdr (assq :noweb params)) "")))))
|
|
|
|
(defun org-babel-expand-noweb-references (&optional info parent-buffer)
|
|
"Expand Noweb references in the body of the current source code block.
|
|
|
|
For example the following reference would be replaced with the
|
|
body of the source-code block named `example-block'.
|
|
|
|
<<example-block>>
|
|
|
|
Note that any text preceding the <<foo>> construct on a line will
|
|
be interposed between the lines of the replacement text. So for
|
|
example if <<foo>> is placed behind a comment, then the entire
|
|
replacement text will also be commented.
|
|
|
|
This function must be called from inside of the buffer containing
|
|
the source-code block which holds BODY.
|
|
|
|
In addition the following syntax can be used to insert the
|
|
results of evaluating the source-code block named `example-block'.
|
|
|
|
<<example-block()>>
|
|
|
|
Any optional arguments can be passed to example-block by placing
|
|
the arguments inside the parenthesis following the convention
|
|
defined by `org-babel-lob'. For example
|
|
|
|
<<example-block(a=9)>>
|
|
|
|
would set the value of argument \"a\" equal to \"9\". Note that
|
|
these arguments are not evaluated in the current source-code
|
|
block but are passed literally to the \"example-block\"."
|
|
(let* ((parent-buffer (or parent-buffer (current-buffer)))
|
|
(info (or info (org-babel-get-src-block-info 'light)))
|
|
(lang (nth 0 info))
|
|
(body (nth 1 info))
|
|
(ob-nww-start org-babel-noweb-wrap-start)
|
|
(ob-nww-end org-babel-noweb-wrap-end)
|
|
(new-body "")
|
|
(nb-add (lambda (text) (setq new-body (concat new-body text))))
|
|
index source-name evaluate prefix)
|
|
(with-temp-buffer
|
|
(setq-local org-babel-noweb-wrap-start ob-nww-start)
|
|
(setq-local org-babel-noweb-wrap-end ob-nww-end)
|
|
(insert body) (goto-char (point-min))
|
|
(setq index (point))
|
|
(while (and (re-search-forward (org-babel-noweb-wrap) nil t))
|
|
(save-match-data (setf source-name (match-string 1)))
|
|
(save-match-data (setq evaluate (string-match "(.*)" source-name)))
|
|
(save-match-data
|
|
(setq prefix
|
|
(buffer-substring (match-beginning 0)
|
|
(save-excursion
|
|
(beginning-of-line 1) (point)))))
|
|
;; add interval to new-body (removing noweb reference)
|
|
(goto-char (match-beginning 0))
|
|
(funcall nb-add (buffer-substring index (point)))
|
|
(goto-char (match-end 0))
|
|
(setq index (point))
|
|
(funcall
|
|
nb-add
|
|
(with-current-buffer parent-buffer
|
|
(save-restriction
|
|
(widen)
|
|
(mapconcat ;; Interpose PREFIX between every line.
|
|
#'identity
|
|
(split-string
|
|
(if evaluate
|
|
(let ((raw (org-babel-ref-resolve source-name)))
|
|
(if (stringp raw) raw (format "%S" raw)))
|
|
(or
|
|
;; Retrieve from the Library of Babel.
|
|
(nth 2 (assoc-string source-name org-babel-library-of-babel))
|
|
;; Return the contents of headlines literally.
|
|
(save-excursion
|
|
(when (org-babel-ref-goto-headline-id source-name)
|
|
(org-babel-ref-headline-body)))
|
|
;; Find the expansion of reference in this buffer.
|
|
(save-excursion
|
|
(goto-char (point-min))
|
|
(let* ((name-regexp
|
|
(org-babel-named-src-block-regexp-for-name
|
|
source-name))
|
|
(comment
|
|
(string= "noweb"
|
|
(cdr (assq :comments (nth 2 info)))))
|
|
(c-wrap
|
|
(lambda (s)
|
|
;; Comment, according to LANG mode,
|
|
;; string S. Return new string.
|
|
(unless org-babel-tangle-uncomment-comments
|
|
(with-temp-buffer
|
|
(funcall (org-src-get-lang-mode lang))
|
|
(comment-region (point)
|
|
(progn (insert s) (point)))
|
|
(org-trim (buffer-string))))))
|
|
(expand-body
|
|
(lambda (i)
|
|
;; Expand body of code blocked
|
|
;; represented by block info I.
|
|
(let ((b (if (org-babel-noweb-p (nth 2 i) :eval)
|
|
(org-babel-expand-noweb-references i)
|
|
(nth 1 i))))
|
|
(if (not comment) b
|
|
(let ((cs (org-babel-tangle-comment-links i)))
|
|
(concat (funcall c-wrap (car cs)) "\n"
|
|
b "\n"
|
|
(funcall c-wrap (cadr cs)))))))))
|
|
(if (and (re-search-forward name-regexp nil t)
|
|
(not (org-in-commented-heading-p)))
|
|
;; Found a source block named SOURCE-NAME.
|
|
;; Assume it is unique; do not look after
|
|
;; `:noweb-ref' header argument.
|
|
(funcall expand-body
|
|
(org-babel-get-src-block-info 'light))
|
|
;; Though luck. We go into the long process
|
|
;; of checking each source block and expand
|
|
;; those with a matching Noweb reference.
|
|
(let ((expansion nil))
|
|
(org-babel-map-src-blocks nil
|
|
(unless (org-in-commented-heading-p)
|
|
(let* ((info
|
|
(org-babel-get-src-block-info 'light))
|
|
(parameters (nth 2 info)))
|
|
(when (equal source-name
|
|
(cdr (assq :noweb-ref parameters)))
|
|
(push (funcall expand-body info) expansion)
|
|
(push (or (cdr (assq :noweb-sep parameters))
|
|
"\n")
|
|
expansion)))))
|
|
(when expansion
|
|
(mapconcat #'identity
|
|
(nreverse (cdr expansion))
|
|
""))))))
|
|
;; Possibly raise an error if named block doesn't exist.
|
|
(if (or org-babel-noweb-error-all-langs
|
|
(member lang org-babel-noweb-error-langs))
|
|
(error "%s could not be resolved (see \
|
|
`org-babel-noweb-error-langs')"
|
|
(org-babel-noweb-wrap source-name))
|
|
"")))
|
|
"[\n\r]")
|
|
(concat "\n" prefix))))))
|
|
(funcall nb-add (buffer-substring index (point-max))))
|
|
new-body))
|
|
|
|
(defun org-babel--script-escape-inner (str)
|
|
(let (in-single in-double backslash out)
|
|
(mapc
|
|
(lambda (ch)
|
|
(setq
|
|
out
|
|
(if backslash
|
|
(progn
|
|
(setq backslash nil)
|
|
(cond
|
|
((and in-single (eq ch ?'))
|
|
;; Escaped single quote inside single quoted string:
|
|
;; emit just a single quote, since we've changed the
|
|
;; outer quotes to double.
|
|
(cons ch out))
|
|
((eq ch ?\")
|
|
;; Escaped double quote
|
|
(if in-single
|
|
;; This should be interpreted as backslash+quote,
|
|
;; not an escape. Emit a three backslashes
|
|
;; followed by a quote (because one layer of
|
|
;; quoting will be stripped by `org-babel-read').
|
|
(append (list ch ?\\ ?\\ ?\\) out)
|
|
;; Otherwise we are in a double-quoted string. Emit
|
|
;; a single escaped quote
|
|
(append (list ch ?\\) out)))
|
|
((eq ch ?\\)
|
|
;; Escaped backslash: emit a single escaped backslash
|
|
(append (list ?\\ ?\\) out))
|
|
;; Other: emit a quoted backslash followed by whatever
|
|
;; the character was (because one layer of quoting will
|
|
;; be stripped by `org-babel-read').
|
|
(t (append (list ch ?\\ ?\\) out))))
|
|
(cl-case ch
|
|
(?\[ (if (or in-double in-single)
|
|
(cons ?\[ out)
|
|
(cons ?\( out)))
|
|
(?\] (if (or in-double in-single)
|
|
(cons ?\] out)
|
|
(cons ?\) out)))
|
|
(?\{ (if (or in-double in-single)
|
|
(cons ?\{ out)
|
|
(cons ?\( out)))
|
|
(?\} (if (or in-double in-single)
|
|
(cons ?\} out)
|
|
(cons ?\) out)))
|
|
(?, (if (or in-double in-single)
|
|
(cons ?, out) (cons ?\s out)))
|
|
(?\' (if in-double
|
|
(cons ?\' out)
|
|
(setq in-single (not in-single)) (cons ?\" out)))
|
|
(?\" (if in-single
|
|
(append (list ?\" ?\\) out)
|
|
(setq in-double (not in-double)) (cons ?\" out)))
|
|
(?\\ (unless (or in-single in-double)
|
|
(error "Can't handle backslash outside string in `org-babel-script-escape'"))
|
|
(setq backslash t)
|
|
out)
|
|
(t (cons ch out))))))
|
|
(string-to-list str))
|
|
(when (or in-single in-double)
|
|
(error "Unterminated string in `org-babel-script-escape'"))
|
|
(apply #'string (reverse out))))
|
|
|
|
(defun org-babel-script-escape (str &optional force)
|
|
"Safely convert tables into elisp lists."
|
|
(unless (stringp str)
|
|
(error "`org-babel-script-escape' expects a string"))
|
|
(let ((escaped
|
|
(cond
|
|
((and (> (length str) 2)
|
|
(or (and (string-equal "[" (substring str 0 1))
|
|
(string-equal "]" (substring str -1)))
|
|
(and (string-equal "{" (substring str 0 1))
|
|
(string-equal "}" (substring str -1)))
|
|
(and (string-equal "(" (substring str 0 1))
|
|
(string-equal ")" (substring str -1)))))
|
|
|
|
(concat "'" (org-babel--script-escape-inner str)))
|
|
((or force
|
|
(and (> (length str) 2)
|
|
(or (and (string-equal "'" (substring str 0 1))
|
|
(string-equal "'" (substring str -1)))
|
|
;; We need to pass double-quoted strings
|
|
;; through the backslash-twiddling bits, even
|
|
;; though we don't need to change their
|
|
;; delimiters.
|
|
(and (string-equal "\"" (substring str 0 1))
|
|
(string-equal "\"" (substring str -1))))))
|
|
(org-babel--script-escape-inner str))
|
|
(t str))))
|
|
(condition-case nil (org-babel-read escaped) (error escaped))))
|
|
|
|
(defun org-babel-read (cell &optional inhibit-lisp-eval)
|
|
"Convert the string value of CELL to a number if appropriate.
|
|
Otherwise if CELL looks like lisp (meaning it starts with a
|
|
\"(\", \"\\='\", \"\\=`\" or a \"[\") then read and evaluate it as
|
|
lisp, otherwise return it unmodified as a string. Optional
|
|
argument INHIBIT-LISP-EVAL inhibits lisp evaluation for
|
|
situations in which is it not appropriate."
|
|
(cond ((not (org-string-nw-p cell)) cell)
|
|
((org-babel--string-to-number cell))
|
|
((and (not inhibit-lisp-eval)
|
|
(or (memq (string-to-char cell) '(?\( ?' ?` ?\[))
|
|
(string= cell "*this*")))
|
|
(eval (read cell) t))
|
|
((eq (string-to-char cell) ?\") (read cell))
|
|
(t (org-no-properties cell))))
|
|
|
|
(defun org-babel--string-to-number (string)
|
|
"If STRING represents a number return its value.
|
|
Otherwise return nil."
|
|
(unless (string-match-p "\\s-" (org-trim string))
|
|
(let ((interned-string (ignore-errors (read string))))
|
|
(when (numberp interned-string)
|
|
interned-string))))
|
|
|
|
(defun org-babel-import-elisp-from-file (file-name &optional separator)
|
|
"Read the results located at FILE-NAME into an elisp table.
|
|
If the table is trivial, then return it as a scalar."
|
|
(save-window-excursion
|
|
(let ((result
|
|
(with-temp-buffer
|
|
(condition-case err
|
|
(progn
|
|
(org-table-import file-name separator)
|
|
(delete-file file-name)
|
|
(delq nil
|
|
(mapcar (lambda (row)
|
|
(and (not (eq row 'hline))
|
|
(mapcar #'org-babel-string-read row)))
|
|
(org-table-to-lisp))))
|
|
(error (message "Error reading results: %s" err) nil)))))
|
|
(pcase result
|
|
(`((,scalar)) scalar)
|
|
(`((,_ ,_ . ,_)) result)
|
|
(`(,scalar) scalar)
|
|
(_ result)))))
|
|
|
|
(defun org-babel-string-read (cell)
|
|
"Strip nested \"s from around strings."
|
|
(org-babel-read (or (and (stringp cell)
|
|
(string-match "\"\\(.+\\)\"" cell)
|
|
(match-string 1 cell))
|
|
cell) t))
|
|
|
|
(defun org-babel-chomp (string &optional regexp)
|
|
"Strip a trailing space or carriage return from STRING.
|
|
The default regexp used is \"[ \\f\\t\\n\\r\\v]\" but another one
|
|
can be specified as the REGEXP argument."
|
|
(let ((regexp (or regexp "[ \f\t\n\r\v]")))
|
|
(while (and (> (length string) 0)
|
|
(string-match regexp (substring string -1)))
|
|
(setq string (substring string 0 -1)))
|
|
string))
|
|
|
|
(defun org-babel-process-file-name (name &optional no-quote-p)
|
|
"Prepare NAME to be used in an external process.
|
|
If NAME specifies a remote location, the remote portion of the
|
|
name is removed, since in that case the process will be executing
|
|
remotely. The file name is then processed by `expand-file-name'.
|
|
Unless second argument NO-QUOTE-P is non-nil, the file name is
|
|
additionally processed by `shell-quote-argument'."
|
|
(let ((f (org-babel-local-file-name (expand-file-name name))))
|
|
(if no-quote-p f (shell-quote-argument f))))
|
|
|
|
(defvar org-babel-temporary-directory)
|
|
(unless (or noninteractive (boundp 'org-babel-temporary-directory))
|
|
(defvar org-babel-temporary-directory
|
|
(or (and (boundp 'org-babel-temporary-directory)
|
|
(file-exists-p org-babel-temporary-directory)
|
|
org-babel-temporary-directory)
|
|
(make-temp-file "babel-" t))
|
|
"Directory to hold temporary files created to execute code blocks.
|
|
Used by `org-babel-temp-file'. This directory will be removed on
|
|
Emacs shutdown."))
|
|
|
|
(defcustom org-babel-remote-temporary-directory "/tmp/"
|
|
"Directory to hold temporary files on remote hosts."
|
|
:group 'org-babel
|
|
:type 'string)
|
|
|
|
(defmacro org-babel-result-cond (result-params scalar-form &rest table-forms)
|
|
"Call the code to parse raw string results according to RESULT-PARAMS."
|
|
(declare (indent 1)
|
|
(debug (form form &rest form)))
|
|
(org-with-gensyms (params)
|
|
`(let ((,params ,result-params))
|
|
(unless (member "none" ,params)
|
|
(if (or (member "scalar" ,params)
|
|
(member "verbatim" ,params)
|
|
(member "html" ,params)
|
|
(member "code" ,params)
|
|
(member "pp" ,params)
|
|
(member "file" ,params)
|
|
(and (or (member "output" ,params)
|
|
(member "raw" ,params)
|
|
(member "org" ,params)
|
|
(member "drawer" ,params))
|
|
(not (member "table" ,params))))
|
|
,scalar-form
|
|
,@table-forms)))))
|
|
(def-edebug-spec org-babel-result-cond (form form body))
|
|
|
|
(defun org-babel-temp-file (prefix &optional suffix)
|
|
"Create a temporary file in the `org-babel-temporary-directory'.
|
|
Passes PREFIX and SUFFIX directly to `make-temp-file' with the
|
|
value of `temporary-file-directory' temporarily set to the value
|
|
of `org-babel-temporary-directory'."
|
|
(if (file-remote-p default-directory)
|
|
(let ((prefix
|
|
(concat (file-remote-p default-directory)
|
|
(expand-file-name
|
|
prefix org-babel-remote-temporary-directory))))
|
|
(make-temp-file prefix nil suffix))
|
|
(let ((temporary-file-directory
|
|
(or (and (boundp 'org-babel-temporary-directory)
|
|
(file-exists-p org-babel-temporary-directory)
|
|
org-babel-temporary-directory)
|
|
temporary-file-directory)))
|
|
(make-temp-file prefix nil suffix))))
|
|
|
|
(defun org-babel-remove-temporary-directory ()
|
|
"Remove `org-babel-temporary-directory' on Emacs shutdown."
|
|
(when (and (boundp 'org-babel-temporary-directory)
|
|
(file-exists-p org-babel-temporary-directory))
|
|
;; taken from `delete-directory' in files.el
|
|
(condition-case nil
|
|
(progn
|
|
(mapc (lambda (file)
|
|
;; This test is equivalent to
|
|
;; (and (file-directory-p fn) (not (file-symlink-p fn)))
|
|
;; but more efficient
|
|
(if (eq t (car (file-attributes file)))
|
|
(delete-directory file)
|
|
(delete-file file)))
|
|
;; We do not want to delete "." and "..".
|
|
(directory-files org-babel-temporary-directory 'full
|
|
"^\\([^.]\\|\\.\\([^.]\\|\\..\\)\\).*"))
|
|
(delete-directory org-babel-temporary-directory))
|
|
(error
|
|
(message "Failed to remove temporary Org-babel directory %s"
|
|
(if (boundp 'org-babel-temporary-directory)
|
|
org-babel-temporary-directory
|
|
"[directory not defined]"))))))
|
|
|
|
(add-hook 'kill-emacs-hook 'org-babel-remove-temporary-directory)
|
|
|
|
(defun org-babel-one-header-arg-safe-p (pair safe-list)
|
|
"Determine if the PAIR is a safe babel header arg according to SAFE-LIST.
|
|
|
|
For the format of SAFE-LIST, see `org-babel-safe-header-args'."
|
|
(and (consp pair)
|
|
(keywordp (car pair))
|
|
(stringp (cdr pair))
|
|
(or
|
|
(memq (car pair) safe-list)
|
|
(let ((entry (assq (car pair) safe-list)))
|
|
(and entry
|
|
(consp entry)
|
|
(cond ((functionp (cdr entry))
|
|
(funcall (cdr entry) (cdr pair)))
|
|
((listp (cdr entry))
|
|
(member (cdr pair) (cdr entry)))
|
|
(t nil)))))))
|
|
|
|
(defun org-babel-generate-file-param (src-name params)
|
|
"Calculate the filename for source block results.
|
|
|
|
The directory is calculated from the :output-dir property of the
|
|
source block; if not specified, use the current directory.
|
|
|
|
If the source block has a #+NAME and the :file parameter does not
|
|
contain any period characters, then the :file parameter is
|
|
treated as an extension, and the output file name is the
|
|
concatenation of the directory (as calculated above), the block
|
|
name, a period, and the parameter value as a file extension.
|
|
Otherwise, the :file parameter is treated as a full file name,
|
|
and the output file name is the directory (as calculated above)
|
|
plus the parameter value."
|
|
(let* ((file-cons (assq :file params))
|
|
(file-ext-cons (assq :file-ext params))
|
|
(file-ext (cdr-safe file-ext-cons))
|
|
(dir (cdr-safe (assq :output-dir params)))
|
|
fname)
|
|
;; create the output-dir if it does not exist
|
|
(when dir
|
|
(make-directory dir t))
|
|
(if file-cons
|
|
;; :file given; add :output-dir if given
|
|
(when dir
|
|
(setcdr file-cons (concat (file-name-as-directory dir) (cdr file-cons))))
|
|
;; :file not given; compute from name and :file-ext if possible
|
|
(when (and src-name file-ext)
|
|
(if dir
|
|
(setq fname (concat (file-name-as-directory (or dir ""))
|
|
src-name "." file-ext))
|
|
(setq fname (concat src-name "." file-ext)))
|
|
(setq params (cons (cons :file fname) params))))
|
|
params))
|
|
|
|
(defun org-babel-graphical-output-file (params)
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"File where a babel block should send graphical output, per PARAMS.
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|
Return nil if no graphical output is expected. Raise an error if
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|
the output file is ill-defined."
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(let ((file (cdr (assq :file params))))
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(cond (file (and (member "graphics" (cdr (assq :result-params params)))
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file))
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((assq :file-ext params)
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(user-error ":file-ext given but no :file generated; did you forget \
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|
to name a block?"))
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(t (user-error "No :file header argument given; cannot create \
|
|
graphical result")))))
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(defun org-babel-make-language-alias (new old)
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|
"Make source blocks of type NEW aliases for those of type OLD.
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|
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NEW and OLD should be strings. This function should be called
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|
after the babel API for OLD-type source blocks is fully defined.
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|
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|
Callers of this function will probably want to add an entry to
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|
`org-src-lang-modes' as well."
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|
(dolist (fn '("execute" "expand-body" "prep-session"
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|
"variable-assignments" "load-session"
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|
"edit-prep"))
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|
(let ((sym (intern-soft (concat "org-babel-" fn ":" old))))
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|
(when (and sym (fboundp sym))
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|
(defalias (intern (concat "org-babel-" fn ":" new)) sym))))
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|
;; Technically we don't need a `dolist' for just one variable, but
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|
;; we keep it for symmetry/ease of future expansion.
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|
(dolist (var '("default-header-args"))
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|
(let ((sym (intern-soft (concat "org-babel-" var ":" old))))
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|
(when (and sym (boundp sym))
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|
(defvaralias (intern (concat "org-babel-" var ":" new)) sym)))))
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|
|
|
(provide 'ob-core)
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|
|
|
;; Local variables:
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|
;; generated-autoload-file: "org-loaddefs.el"
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|
;; End:
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|
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|
;;; ob-core.el ends here
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