ADD the actual figures and tables

This commit is contained in:
Nathan Dwarshuis 2021-07-23 17:16:41 -04:00
parent 7cd0ca05ba
commit 08f3986d13
9 changed files with 8310 additions and 5 deletions

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* *
!*.tex
!*.bib
!*.glo
!tex !tex
tex/* tex/*
!tex/*.tex !tex/*.tex
!tex/*.bib !tex/*.bib
!tex/*.glo !tex/*.glo
!figures
figures/*
!figures/*.svg
!figures/dms_flowchart.png
!tables
tables/*
!tables/*.tex

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\begin{tabular}{lcc}
\\[-1.8ex]\hline
\hline \\[-1.8ex]
\\[-1.8ex] & \gls{cus} & \gls{cug} \\
\hline \\[-1.8ex]
particle diameter* (\si{\um}) & 130--380 & 130--380 \\
volume* (\si{\ml\per\g\of{dry}}) & 12--18 & 10--16 \\
density* (\si{\g\per\ml}) & 1.04 & 1.04 \\
specific number (\si{\per\g\of{dry}}) & \num{1e6} & \num{8e5} \\
average pore diameter* \si{\um} & 20 & 20 \\
\hline \\[-1.8ex]
\multicolumn{3}{l}{\textit{*in \gls{pbs}}} \\
\end{tabular}

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% Table created by stargazer v.5.2.2 by Marek Hlavac, Harvard University. E-mail: hlavac at fas.harvard.edu
% Date and time: Fri, Jul 23, 2021 - 12:30:10 PM
\begin{tabular}{@{\extracolsep{5pt}}lccc}
\\[-1.8ex]\hline
\hline \\[-1.8ex]
% & \multicolumn{3}{c}{\textit{Dependent variable:}} \\
% \cline{2-4}
\\[-1.8ex] & log(Fold Change) & \ptmem~\% & $\Updelta$CD4+ \% \\
\hline \\[-1.8ex]
Activation Method [DMS] & 0.890$^{***}$ & 0.027$^{**}$ & 0.089$^{***}$ \\
Bioreactor [Grex] & $-$1.712$^{***}$ & $-$0.464$^{***}$ & 0.333$^{***}$ \\
Feed Criteria [Glucose] & $-$0.143 & $-$0.017 & $-$0.001 \\
IL2 Feed Conc. [IU/ml] & $-$0.007$^{***}$ & 0.0002 & 0.001$^{***}$ \\
CD19-CAR Transduced [True] & $-$1.015$^{***}$ & 0.585$^{***}$ & $-$0.171$^{***}$ \\
Donor Age & 0.066$^{***}$ & $-$0.001 & $-$0.014$^{***}$ \\
Donor BMI (kg/m2) & $-$0.265$^{***}$ & $-$0.045$^{***}$ & 0.070$^{***}$ \\
Donor Gender & $-$2.213$^{***}$ & $-$0.190$^{***}$ & 0.391$^{***}$ \\
Donor Demographic [Cauc.] & $-$1.325 & 0.498$^{***}$ & $-$0.289$^{***}$ \\
Donor Demographic [Cauc./Pac. Isl.] & $-$4.154$^{***}$ & 0.646$^{***}$ & $-$0.251$^{**}$ \\
Initial Cell Viability & $-$0.064$^{**}$ & $-$0.007$^{**}$ & 0.027$^{***}$ \\
log(Initial CD4:CD8 Ratio) & $-$1.279$^{***}$ & 0.050 & 0.366$^{***}$ \\
Media Age (days) & 0.0004 & $-$0.001$^{***}$ & 0.0002 \\
Thaw Media Age (days) & $-$0.0005 & 0.001$^{***}$ & $-$0.0004$^{***}$ \\
IL2 Reconstituted Age & $-$0.0001 & 0.00000 & 0.0002 \\
Operator [2] & $-$0.651$^{***}$ & 0.044$^{*}$ & 0.034 \\
Operator [3] & $-$0.343 & $-$0.201$^{***}$ & 0.180$^{***}$ \\
Media Sampled [True] & $-$0.303 & $-$0.023 & 0.051 \\
Constant & 18.988$^{***}$ & 1.765$^{***}$ & $-$4.737$^{***}$ \\
\hline \\[-1.8ex]
Observations & 162 & 162 & 162 \\
R$^{2}$ & 0.764 & 0.872 & 0.864 \\
Adjusted R$^{2}$ & 0.734 & 0.856 & 0.846 \\
Residual Std. Error (df = 143) & 0.567 & 0.066 & 0.074 \\
F Statistic (df = 18; 143) & 25.649$^{***}$ & 53.998$^{***}$ & 50.318$^{***}$ \\
\hline
\hline \\[-1.8ex]
\textit{Note:} & \multicolumn{3}{r}{$^{*}$p$<$0.1; $^{**}$p$<$0.05; $^{***}$p$<$0.01} \\
\end{tabular}

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% Table created by stargazer v.5.2.2 by Marek Hlavac, Harvard University. E-mail: hlavac at fas.harvard.edu
% Date and time: Fri, Jul 23, 2021 - 12:30:08 PM
\begin{tabular}{@{\extracolsep{5pt}}lccc}
\\[-1.8ex]\hline
\hline \\[-1.8ex]
& \multicolumn{3}{c}{\textit{Dependent variable:}} \\
\cline{2-4}
\\[-1.8ex] & log(Fold Change) & \ptmem~\% & $\Updelta$CD4+ \% \\
\\[-1.8ex] & (1) & (2) & (3)\\
\hline \\[-1.8ex]
Activation Method [DMS] & 0.903$^{***}$ & 0.048$^{*}$ & 0.011 \\
Bioreactor [Grex] & $-$1.623$^{***}$ & $-$0.277$^{***}$ & 0.242$^{***}$ \\
Constant & 2.555$^{***}$ & 0.309$^{***}$ & $-$0.378$^{***}$ \\
\hline \\[-1.8ex]
Observations & 162 & 162 & 162 \\
R$^{2}$ & 0.440 & 0.317 & 0.177 \\
Adjusted R$^{2}$ & 0.433 & 0.308 & 0.167 \\
Residual Std. Error (df = 159) & 0.827 & 0.144 & 0.172 \\
F Statistic (df = 2; 159) & 62.589$^{***}$ & 36.884$^{***}$ & 17.111$^{***}$ \\
\hline
\hline \\[-1.8ex]
\textit{Note:} & \multicolumn{3}{r}{$^{*}$p$<$0.1; $^{**}$p$<$0.05; $^{***}$p$<$0.01} \\
\end{tabular}