From f6a24398caea3ca2ea641d8ee471d519419be7f6 Mon Sep 17 00:00:00 2001 From: ndwarshuis Date: Thu, 29 Jul 2021 12:20:27 -0400 Subject: [PATCH] ADD regression tables for DOE --- tables/doe_cd4.tex | 24 ++++++++++++++++++++++++ tables/doe_mem1.tex | 24 ++++++++++++++++++++++++ tables/doe_mem2.tex | 31 +++++++++++++++++++++++++++++++ tex/thesis.tex | 18 +++++++++++++++++- 4 files changed, 96 insertions(+), 1 deletion(-) create mode 100644 tables/doe_cd4.tex create mode 100644 tables/doe_mem1.tex create mode 100644 tables/doe_mem2.tex diff --git a/tables/doe_cd4.tex b/tables/doe_cd4.tex new file mode 100644 index 0000000..a7035b6 --- /dev/null +++ b/tables/doe_cd4.tex @@ -0,0 +1,24 @@ +% Table created by stargazer v.5.2.2 by Marek Hlavac, Harvard University. E-mail: hlavac at fas.harvard.edu +% Date and time: Thu, Jul 29, 2021 - 12:14:17 PM +\begin{tabular}{@{\extracolsep{5pt}}lc} +\\[-1.8ex]\hline +\hline \\[-1.8ex] + & \multicolumn{1}{c}{\textit{Dependent variable:}} \\ +\cline{2-2} +\\[-1.8ex] & CD4+ Cells \\ +\hline \\[-1.8ex] + Dataset [2] & 1,271,171.000$^{**}$ \\ + Functional mAb \% & 44,896.500$^{***}$ \\ + IL2 Conc. (IU/ml) & 86,177.710$^{***}$ \\ + DMS Conc. (1/ml) & 1,742.752$^{***}$ \\ + Intercept & $-$5,344,494.000$^{***}$ \\ + \hline \\[-1.8ex] +Observations & 30 \\ +R$^{2}$ & 0.888 \\ +Adjusted R$^{2}$ & 0.870 \\ +Residual Std. Error & 727,042.800 (df = 25) \\ +F Statistic & 49.454$^{***}$ (df = 4; 25) \\ +\hline +\hline \\[-1.8ex] +\textit{Note:} & \multicolumn{1}{r}{$^{*}$p$<$0.1; $^{**}$p$<$0.05; $^{***}$p$<$0.01} \\ +\end{tabular} \ No newline at end of file diff --git a/tables/doe_mem1.tex b/tables/doe_mem1.tex new file mode 100644 index 0000000..921168c --- /dev/null +++ b/tables/doe_mem1.tex @@ -0,0 +1,24 @@ +% Table created by stargazer v.5.2.2 by Marek Hlavac, Harvard University. E-mail: hlavac at fas.harvard.edu +% Date and time: Thu, Jul 29, 2021 - 12:14:08 PM +\begin{tabular}{@{\extracolsep{5pt}}lc} +\\[-1.8ex]\hline +\hline \\[-1.8ex] + & \multicolumn{1}{c}{\textit{Dependent variable:}} \\ +\cline{2-2} +\\[-1.8ex] & CD62L+CCR7+ Cells \\ +\hline \\[-1.8ex] + Dataset [2] & 4,661,754.000$^{*}$ \\ + Functional mAb \% & 72,218.190 \\ + IL2 Conc. (IU/ml) & 306,486.100$^{***}$ \\ + DMS Conc. (1/ml) & 240.038 \\ + Intercept & $-$3,478,851.000 \\ + \hline \\[-1.8ex] +Observations & 30 \\ +R$^{2}$ & 0.331 \\ +Adjusted R$^{2}$ & 0.224 \\ +Residual Std. Error & 3,659,501.000 (df = 25) \\ +F Statistic & 3.096$^{**}$ (df = 4; 25) \\ +\hline +\hline \\[-1.8ex] +\textit{Note:} & \multicolumn{1}{r}{$^{*}$p$<$0.1; $^{**}$p$<$0.05; $^{***}$p$<$0.01} \\ +\end{tabular} \ No newline at end of file diff --git a/tables/doe_mem2.tex b/tables/doe_mem2.tex new file mode 100644 index 0000000..1359154 --- /dev/null +++ b/tables/doe_mem2.tex @@ -0,0 +1,31 @@ +% Table created by stargazer v.5.2.2 by Marek Hlavac, Harvard University. E-mail: hlavac at fas.harvard.edu +% Date and time: Thu, Jul 29, 2021 - 12:14:14 PM +\begin{tabular}{@{\extracolsep{5pt}}lc} +\\[-1.8ex]\hline +\hline \\[-1.8ex] + & \multicolumn{1}{c}{\textit{Dependent variable:}} \\ +\cline{2-2} +\\[-1.8ex] & log(CD62L+CCR7+ Cells) \\ +\hline \\[-1.8ex] + Dataset [2] & 0.269 \\ + Functional mAb \% & 2.408$^{*}$ \\ + (Functional mAb \%)**2 & 0.443$^{*}$ \\ + IL2 Conc. (IU/ml) & 6.054$^{*}$ \\ + (IL2 Conc. (IU/ml))**2 & $-$0.730$^{**}$ \\ + DMS Conc. (1/ml) & 7.437$^{**}$ \\ + (DMS Conc. (1/ml))**2 & $-$0.486$^{*}$ \\ + (Functional mAb \%)*(IL2 Conc. (IU/ml)) & $-$0.001 \\ + (Functional mAb \%)*(DMS Conc. (1/ml)) & $-$0.00001$^{*}$ \\ + (IL2 Conc. (IU/ml)*(DMS Conc. (1/ml)) & $-$0.0001$^{*}$ \\ + (Functional mAb \%)*(IL2 Conc. (IU/ml)*(DMS Conc. (1/ml)) & 0.00000$^{*}$ \\ + Intercept & 20.899$^{***}$ \\ + \hline \\[-1.8ex] +Observations & 30 \\ +R$^{2}$ & 0.741 \\ +Adjusted R$^{2}$ & 0.583 \\ +Residual Std. Error & 0.228 (df = 18) \\ +F Statistic & 4.693$^{***}$ (df = 11; 18) \\ +\hline +\hline \\[-1.8ex] +\textit{Note:} & \multicolumn{1}{r}{$^{*}$p$<$0.1; $^{**}$p$<$0.05; $^{***}$p$<$0.01} \\ +\end{tabular} \ No newline at end of file diff --git a/tex/thesis.tex b/tex/thesis.tex index 1743265..db987ad 100644 --- a/tex/thesis.tex +++ b/tex/thesis.tex @@ -2022,7 +2022,23 @@ provide these benefits. \label{fig:doe_responses} \end{figure*} -% TABLE DOE regression results +\begin{table}[!h] \centering + \caption{Total CD62L+CCR7+ T cell response (first order regression)} + \label{tab:doe_mem1.tex} + \input{../tables/doe_mem1.tex} +\end{table} + +\begin{table}[!h] \centering + \caption{Total CD62L+CCR7+ T cell response (third order regression)} + \label{tab:doe_mem2.tex} + \input{../tables/doe_mem2.tex} +\end{table} + +\begin{table}[!h] \centering + \caption{Total CD4+ T cell response} + \label{tab:doe_cd4.tex} + \input{../tables/doe_cd4.tex} +\end{table} % TODO this section header sucks \subsection{AI modeling reveals highly predictive species}