ADD experimental overview and fold change/viability plots to il15 data

tex/thesis.tex

@@ -3033,27 +3033,31 @@ many conditions, we hypothesized that \gls{il15} may be responsible for this,
 and further that the unique \textit{cis/trans} activity of \gls{il15} may be
 more active in the \gls{dms} system due to higher cell density.
 
-% TODO actually add captions
-% TODO add fold change and viability to these
-% TODO maybe combine these
 % TODO add some background into why IL15 is important and the proposed mechanism
 \begin{figure*}[ht!]
   \begingroup
 
   \includegraphics{../figures/il15_blockade_1.png}
+  \phantomsubcaption\label{fig:il15_1_overview}
   \phantomsubcaption\label{fig:il15_1_fc}
   \phantomsubcaption\label{fig:il15_1_viability}
   \phantomsubcaption\label{fig:il15_1_mem}
 
   \endgroup
   \caption[IL15 blocking I]
-  {Blocking with IL15 does not lead to differences in memory or growth.
+  {Blocking IL15Ra does not lead to differences in memory or growth.
+    \subcap{fig:il15_1_overview}{Experimental overview}
+    Longitudinal measurements of
+    \subcap{fig:il15_1_fc}{fold change} and
+    \subcap{fig:il15_1_viability}{viability} for blocked and unblocked
+    conditions expanded with either beads or \glspl{dms}.
+    \subcap{fig:il15_1_mem}{Flow cytometry markers for \gls{dms}-expanded T
+      cells at day 14 for blocked and unblocked groups.}.
   }
   \label{fig:il15_1}
 \end{figure*}
 
 % TODO how did I determine how much to add?
-% TODO how often was this added?
 % TODO just gate these as normal because this looks sketchy
 We first tested this hypothesis by blocking \gls{il15r} with either a specific
 \gls{mab} or an \gls{igg} isotype control. We observed no difference in the
@@ -3070,13 +3074,21 @@ the markers, and by extension showing no difference in phenotype
   \begingroup
 
   \includegraphics{../figures/il15_blockade_2.png}
+  \phantomsubcaption\label{fig:il15_2_overview}
   \phantomsubcaption\label{fig:il15_2_fc}
   \phantomsubcaption\label{fig:il15_2_viability}
   \phantomsubcaption\label{fig:il15_2_mem}
 
   \endgroup
   \caption[IL15 blocking II]
-  {Blocking with IL15 does not lead to differences in memory or growth.
+  {Blocking soluble IL15 does not lead to differences in memory or growth.
+    \subcap{fig:il15_2_overview}{Experimental overview}
+    Longitudinal measurements of
+    \subcap{fig:il15_2_fc}{fold change} and
+    \subcap{fig:il15_2_viability}{viability} for blocked and unblocked
+    conditions expanded with \glspl{dms}.
+    \subcap{fig:il15_2_mem}{Flow cytometry markers for \gls{dms}-expanded T
+      cells at day 14 for blocked and unblocked groups.}.
   }
   \label{fig:il15_2}
 \end{figure*}