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ENH add cd4 and ratio to existing doe response plots

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Nathan Dwarshuis 2021-07-29 16:32:54 -04:00
parent 7562efed9e
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2 changed files with 2837 additions and 29 deletions
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figures/doe_responses.svg
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tex/thesis.tex
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@ -2269,36 +2269,40 @@ at \SI{10}{\IU\per\ml} throughout the remainder of this aim.
\includegraphics{../figures/doe_responses.png} \includegraphics{../figures/doe_responses.png}
\phantomsubcaption\label{fig:doe_responses_mem} \phantomsubcaption\label{fig:doe_responses_mem}
\phantomsubcaption\label{fig:doe_responses_cd4} \phantomsubcaption\label{fig:doe_responses_cd4}
\phantomsubcaption\label{fig:doe_responses_mem4}
\phantomsubcaption\label{fig:doe_responses_ratio}
\endgroup \endgroup
\caption[T cell optimization through Design of Experiments] \caption[T cell optimization through Design of Experiments]
{\gls{doe} methodology reveals optimal conditions for expanding T cell {\gls{doe} methodology reveals optimal conditions for expanding T cell
subsets. Responses vs IL2 concentration, \gls{dms} concentration, and subsets. Responses vs IL2 concentration, \gls{dms} concentration, and
functional \gls{mab} percentage are shown for functional \gls{mab} percentage are shown for
\subcap{fig:doe_responses_mem}{total \ptmem{} T cells} and \subcap{fig:doe_responses_mem}{total \ptmem{} T cells},
\subcap{fig:doe_responses_cd4}{total \pth{} T cells}. Each point represents \subcap{fig:doe_responses_cd4}{total \pth{} T cells},
one run. \subcap{fig:doe_responses_mem4}{total \ptmemh{} T cells}, and
\subcap{fig:doe_responses_ratio}{ratio of CD4 and CD8 T cells in the
\ptmem{} compartment}. Each point represents one run.
} }
\label{fig:doe_responses} \label{fig:doe_responses}
\end{figure*} \end{figure*}
% \begin{table}[!h] \centering \begin{table}[!h] \centering
% \caption{Total CD62L+CCR7+ T cell response (first order regression)} \caption{Total CD62L+CCR7+ T cell response (first order regression)}
% \label{tab:doe_mem1.tex} \label{tab:doe_mem1.tex}
% \input{../tables/doe_mem1.tex} \input{../tables/doe_mem1.tex}
% \end{table} \end{table}
% \begin{table}[!h] \centering \begin{table}[!h] \centering
% \caption{Total CD62L+CCR7+ T cell response (third order regression)} \caption{Total CD62L+CCR7+ T cell response (third order regression)}
% \label{tab:doe_mem2.tex} \label{tab:doe_mem2.tex}
% \input{../tables/doe_mem2.tex} \input{../tables/doe_mem2.tex}
% \end{table} \end{table}
% \begin{table}[!h] \centering \begin{table}[!h] \centering
% \caption{Total CD4+ T cell response} \caption{Total CD4+ T cell response}
% \label{tab:doe_cd4.tex} \label{tab:doe_cd4.tex}
% \input{../tables/doe_cd4.tex} \input{../tables/doe_cd4.tex}
% \end{table} \end{table}
\begin{table}[!h] \centering \begin{table}[!h] \centering
\caption{Linear regression for total \ptmemh{} cells} \caption{Linear regression for total \ptmemh{} cells}