ADD conda envs for various misdeeds
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name: giab-tools
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channels:
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- conda-forge
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- bioconda
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dependencies:
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- bedtools=2.30.0
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- samtools=1.15.1
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- vcftools=0.1.16
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- globus-cli=3.11.0
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- jupyter_server=2.0.1
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- notebook=6.5.3
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# minimal requirements for developing python scripts
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name: python-dev
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channels:
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- conda-forge
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dependencies:
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- python=3.11
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- black=23.1.0
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- flake8=6.0.0
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- mypy=1.1.1
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- ipython=8.11.0
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# minimal requirements for developing r scripts
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name: r-dev
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channels:
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- conda-forge
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dependencies:
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- r-base=4.2.2
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- r-tidyverse=2.0.0
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- r-styler=1.9.1
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- r-lintr=3.0.2
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- r-ggpubr=0.6.0
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