 Nathan Dwarshuis
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75b1b9e588
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ENH integrate new appendices
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2021-08-03 19:05:34 -04:00 |
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Nathan Dwarshuis
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fe9a57d519
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ADD appendix for matlab stuff
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2021-08-03 19:01:31 -04:00 |
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Nathan Dwarshuis
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e61817f192
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ADD a bunch of stuff about how I calculated diffusion and such
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2021-08-03 18:21:08 -04:00 |
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Nathan Dwarshuis
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f574b1b331
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ADD a bunch of future work fluff
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2021-08-03 13:57:51 -04:00 |
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Nathan Dwarshuis
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c1ff03d5f7
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ENH tighten up the mouse discussion
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2021-08-03 13:27:50 -04:00 |
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Nathan Dwarshuis
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efebf0a98d
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ENH add citations where needed
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2021-08-03 12:29:00 -04:00 |
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Nathan Dwarshuis
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8415b9519d
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ADD bcma car section
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2021-08-03 11:43:43 -04:00 |
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Nathan Dwarshuis
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530339f971
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ADD appendix for the meta-analysis stuff
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2021-08-02 19:06:38 -04:00 |
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Nathan Dwarshuis
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5fab51b47c
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ADD jeff wu's epic textbook
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2021-08-02 18:50:59 -04:00 |
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Nathan Dwarshuis
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be2bf9fa95
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ENH make the modeling section better
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2021-08-02 18:45:33 -04:00 |
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Nathan Dwarshuis
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9e9d897fae
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ADD qbd section
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2021-08-02 18:14:25 -04:00 |
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Nathan Dwarshuis
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ce1beeb54a
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ENH spruce up the T cell activation section
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2021-08-02 17:25:12 -04:00 |
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Nathan Dwarshuis
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2be5c4ab2f
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ADD a bunch of T cell quality stuff
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2021-08-02 15:48:15 -04:00 |
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Nathan Dwarshuis
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8049cbbaa3
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ADD T cell sources section
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2021-08-02 13:42:15 -04:00 |
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Nathan Dwarshuis
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e8ef6cbaca
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ADD references to the il15 section
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2021-08-02 12:42:35 -04:00 |
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Nathan Dwarshuis
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39201efffb
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ADD references to the microcarrier section
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2021-08-02 12:00:34 -04:00 |
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Nathan Dwarshuis
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fe3c12c072
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ADD a bunch of references to the bioreactor section
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2021-08-02 11:42:29 -04:00 |
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Nathan Dwarshuis
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f903128473
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ADD references to T cell background
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2021-08-02 11:23:13 -04:00 |
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Nathan Dwarshuis
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7e12e23de1
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ADD some helpful comments to myself
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2021-08-01 22:36:20 -04:00 |
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Nathan Dwarshuis
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7047f20a24
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ADD bioreactor scale-up stuff
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2021-08-01 22:30:21 -04:00 |
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Nathan Dwarshuis
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054f6104eb
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ADD background on T cells at large
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2021-08-01 21:52:19 -04:00 |
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Nathan Dwarshuis
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8f7ee97f0a
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ADD a bunch of background on microcarriers
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2021-08-01 18:42:53 -04:00 |
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Nathan Dwarshuis
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bead38f3cd
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ADD a bunch of fluff about how doe's work
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2021-08-01 17:27:14 -04:00 |
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Nathan Dwarshuis
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1ce4b6bd01
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ADD background on IL15
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2021-08-01 16:43:29 -04:00 |
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Nathan Dwarshuis
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adb80cb94e
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ADD beefier background section on integrin pathways
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2021-08-01 13:17:53 -04:00 |
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Nathan Dwarshuis
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a80c8f07d8
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ENH integrate new results
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2021-08-01 12:04:52 -04:00 |
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Nathan Dwarshuis
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714b183109
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ENH integrate some of the new figures
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2021-07-31 20:46:41 -04:00 |
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Nathan Dwarshuis
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591b652890
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ENH integrate the kinetics figure
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2021-07-31 20:11:40 -04:00 |
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Nathan Dwarshuis
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aaa251e253
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ENH put figures in their own subsections
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2021-07-31 18:51:21 -04:00 |
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Nathan Dwarshuis
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499721c2ce
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REF update todos and comments for myself
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2021-07-31 18:37:14 -04:00 |
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Nathan Dwarshuis
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f6fc38aa79
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ADD introductions to all aims
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2021-07-31 18:19:31 -04:00 |
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Nathan Dwarshuis
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b7b500bf28
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REF remove old comment
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2021-07-31 17:49:40 -04:00 |
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Nathan Dwarshuis
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0e3c82946c
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ADD a bunch of references
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2021-07-31 17:47:55 -04:00 |
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Nathan Dwarshuis
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ec0338506c
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ADD footnote explaining that I didn't do the nmr stuff
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2021-07-31 16:59:33 -04:00 |
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Nathan Dwarshuis
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f0cb320c49
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ENH paraphrase/update the modeling methods
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2021-07-31 16:57:56 -04:00 |
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Nathan Dwarshuis
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0bf5b03827
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ADD mouse summary figure
ENH paraphrase the nmr method section
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2021-07-31 16:22:15 -04:00 |
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Nathan Dwarshuis
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19d4df58ca
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ADD regression tables to integrin figures
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2021-07-31 12:57:17 -04:00 |
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Nathan Dwarshuis
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38c24e90cc
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ADD table for inside fraction regression
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2021-07-30 18:10:07 -04:00 |
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Nathan Dwarshuis
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40e11e13fe
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ADD flow mabs
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2021-07-30 18:06:05 -04:00 |
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Nathan Dwarshuis
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40875b4efa
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ADD diffusion figure to the kinetics stuff
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2021-07-30 17:55:45 -04:00 |
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Nathan Dwarshuis
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bca90222f3
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ADD experimental overview and fold change/viability plots to il15 data
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2021-07-30 17:44:17 -04:00 |
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Nathan Dwarshuis
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994df04db2
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ADD experimental overview to integrin figs
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2021-07-30 17:04:13 -04:00 |
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Nathan Dwarshuis
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2547ca8a6b
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FIX order and annotations in spade figure
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2021-07-30 16:39:21 -04:00 |
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Nathan Dwarshuis
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20835d9579
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ENH make dms mod fig not say 'carrier'
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2021-07-30 16:24:12 -04:00 |
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Nathan Dwarshuis
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034d7df9dd
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ENH add cd4 to grex data fig
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2021-07-30 15:23:00 -04:00 |
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Nathan Dwarshuis
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fa68c38c5a
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ENH update caption
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2021-07-30 15:12:24 -04:00 |
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Nathan Dwarshuis
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de87aa4971
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ENH update grex memory data
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2021-07-30 15:10:48 -04:00 |
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Nathan Dwarshuis
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94f5ed8a85
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ADD isotype control figure
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2021-07-30 14:10:39 -04:00 |
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Nathan Dwarshuis
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cae45d4f14
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ENH use water vs pbs snb decay curve
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2021-07-30 13:58:11 -04:00 |
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Nathan Dwarshuis
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1719e545c2
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ENH add biotin wash fig
ADD first doe fig
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2021-07-30 13:56:09 -04:00 |
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Nathan Dwarshuis
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35850690e8
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ADD spade gating figure
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2021-07-30 13:35:31 -04:00 |
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Nathan Dwarshuis
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d2ebb84d91
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ENH add gating strategy fig
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2021-07-30 13:25:24 -04:00 |
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Nathan Dwarshuis
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613bccfa50
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ADD metaanalsysi overvewi fig
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2021-07-30 12:59:52 -04:00 |
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Nathan Dwarshuis
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bd1a2c9f33
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ADD overview figure
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2021-07-30 12:27:37 -04:00 |
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Nathan Dwarshuis
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c5d80389e6
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ADD (some) future directions
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2021-07-29 19:05:37 -04:00 |
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Nathan Dwarshuis
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86868ec140
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ADD conclusion paragraphs
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2021-07-29 18:44:50 -04:00 |
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Nathan Dwarshuis
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24cee598a5
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ADD results for does
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2021-07-29 17:56:27 -04:00 |
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Nathan Dwarshuis
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ea06194344
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ADD contour plots for aim2a
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2021-07-29 16:41:04 -04:00 |
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Nathan Dwarshuis
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d46d8c5620
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ENH add cd4 and ratio to existing doe response plots
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2021-07-29 16:32:54 -04:00 |
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Nathan Dwarshuis
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7562efed9e
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ADD regression results for CD4 mem and mem ratio
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2021-07-29 16:20:40 -04:00 |
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Nathan Dwarshuis
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fa192d90ee
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ADD results section for il2 curves
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2021-07-29 15:07:29 -04:00 |
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Nathan Dwarshuis
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a3b49d42ed
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ADD sr figure and nmr cor figure
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2021-07-29 14:07:43 -04:00 |
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Nathan Dwarshuis
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572f10a9e4
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ADD luminex doe figure
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2021-07-29 13:46:05 -04:00 |
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Nathan Dwarshuis
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1c65546e41
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ENH move IL2 stuff to its own section
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2021-07-29 13:14:40 -04:00 |
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Nathan Dwarshuis
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54fb855b19
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ADD discussion from paper
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2021-07-29 13:11:55 -04:00 |
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Nathan Dwarshuis
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89866515e8
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ADD results from the modeling paper
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2021-07-29 13:01:36 -04:00 |
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Nathan Dwarshuis
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0c98ecce44
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FIX silly char issues
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2021-07-29 12:50:59 -04:00 |
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Nathan Dwarshuis
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6d9084fe92
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ADD methods to aim 2a
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2021-07-29 12:48:13 -04:00 |
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Nathan Dwarshuis
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f6a24398ca
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ADD regression tables for DOE
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2021-07-29 12:20:27 -04:00 |
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Nathan Dwarshuis
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c5820b034d
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ADD discussion to aim 2b
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2021-07-28 22:51:31 -04:00 |
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Nathan Dwarshuis
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48989b763b
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ADD results for il15 and integrin blocking sections
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2021-07-28 22:13:37 -04:00 |
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Nathan Dwarshuis
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830702d95f
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ADD result for spade stuff
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2021-07-28 17:59:19 -04:00 |
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Nathan Dwarshuis
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b3558707d0
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ADD methods to aim 2b
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2021-07-28 17:03:54 -04:00 |
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Nathan Dwarshuis
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3238963b77
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ADD discussion to mouse 2
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2021-07-28 16:12:15 -04:00 |
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Nathan Dwarshuis
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35ba50b7e6
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ADD results for mouse 2 experiment
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2021-07-28 15:32:35 -04:00 |
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Nathan Dwarshuis
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21eab442ee
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ADD method for meta-analysis
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2021-07-28 13:57:15 -04:00 |
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Nathan Dwarshuis
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4994343432
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ENH add diffusion method section
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2021-07-28 13:43:03 -04:00 |
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Nathan Dwarshuis
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395efa6657
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ENH fix the snb decay curve method and results to not overreach
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2021-07-28 12:32:22 -04:00 |
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Nathan Dwarshuis
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0e52b87b04
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FIX make glossaries appear
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2021-07-27 18:39:56 -04:00 |
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Nathan Dwarshuis
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8d82f1424d
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ADD results for mouse 1 QC
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2021-07-27 18:27:13 -04:00 |
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Nathan Dwarshuis
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3ac375de6c
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ADD little bit about which Grex products I used
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2021-07-27 18:18:36 -04:00 |
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Nathan Dwarshuis
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0f55d3b9cb
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ADD paragraph for luminex results
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2021-07-27 18:15:09 -04:00 |
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Nathan Dwarshuis
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eda1f3e6d6
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ADD results paragraph for grex
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2021-07-27 18:06:38 -04:00 |
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Nathan Dwarshuis
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67a4758da0
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ADD small para on bcma
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2021-07-27 17:53:07 -04:00 |
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Nathan Dwarshuis
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ca3a1b9651
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FIX typos
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2021-07-27 17:45:53 -04:00 |
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Nathan Dwarshuis
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07644e1724
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ADD reaction kinetics results paragraphs
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2021-07-27 17:42:11 -04:00 |
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Nathan Dwarshuis
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8126156630
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ADD results for biotin QC
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2021-07-27 17:18:06 -04:00 |
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Nathan Dwarshuis
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f91a944aa5
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ADD interior quantification section
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2021-07-27 16:37:58 -04:00 |
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Nathan Dwarshuis
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b541c280eb
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ADD method for luminex
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2021-07-27 16:13:09 -04:00 |
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Nathan Dwarshuis
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dbf2869ae9
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ADD bcma figure
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2021-07-27 14:04:02 -04:00 |
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Nathan Dwarshuis
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043087ddc5
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ADD luminex panel table
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2021-07-27 13:53:28 -04:00 |
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Nathan Dwarshuis
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c30b7d3c2d
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ADD grex figure
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2021-07-27 13:48:26 -04:00 |
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Nathan Dwarshuis
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e93859056d
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ADD full survival curve to first mouse experiment
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2021-07-27 13:20:35 -04:00 |
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Nathan Dwarshuis
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c610ddb40e
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ADD discussion to aim 3 mouse 1
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2021-07-27 13:05:01 -04:00 |
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Nathan Dwarshuis
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3227c00a8a
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ADD results for mouse model 1
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2021-07-27 12:59:13 -04:00 |
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Nathan Dwarshuis
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cd9f438d7d
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REF add some notes to myself
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2021-07-27 12:26:45 -04:00 |
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Nathan Dwarshuis
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afbb5fadbd
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ADD methods for apoptotic marker quantification
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2021-07-27 12:19:06 -04:00 |
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Nathan Dwarshuis
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b0e0f420eb
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ADD figure for il2 concentration
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2021-07-27 11:24:55 -04:00 |
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Nathan Dwarshuis
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ed63f13797
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ADD apoptosis figure
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2021-07-27 11:07:28 -04:00 |
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Nathan Dwarshuis
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758b04c967
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ADD figures to aim 2b
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2021-07-26 18:16:21 -04:00 |