Commit Graph

159 Commits

Author SHA1 Message Date
Nathan Dwarshuis 054f6104eb ADD background on T cells at large 2021-08-01 21:52:19 -04:00
Nathan Dwarshuis 8f7ee97f0a ADD a bunch of background on microcarriers 2021-08-01 18:42:53 -04:00
Nathan Dwarshuis bead38f3cd ADD a bunch of fluff about how doe's work 2021-08-01 17:27:14 -04:00
Nathan Dwarshuis 1ce4b6bd01 ADD background on IL15 2021-08-01 16:43:29 -04:00
Nathan Dwarshuis adb80cb94e ADD beefier background section on integrin pathways 2021-08-01 13:17:53 -04:00
Nathan Dwarshuis a80c8f07d8 ENH integrate new results 2021-08-01 12:04:52 -04:00
Nathan Dwarshuis 714b183109 ENH integrate some of the new figures 2021-07-31 20:46:41 -04:00
Nathan Dwarshuis 591b652890 ENH integrate the kinetics figure 2021-07-31 20:11:40 -04:00
Nathan Dwarshuis aaa251e253 ENH put figures in their own subsections 2021-07-31 18:51:21 -04:00
Nathan Dwarshuis 499721c2ce REF update todos and comments for myself 2021-07-31 18:37:14 -04:00
Nathan Dwarshuis f6fc38aa79 ADD introductions to all aims 2021-07-31 18:19:31 -04:00
Nathan Dwarshuis b7b500bf28 REF remove old comment 2021-07-31 17:49:40 -04:00
Nathan Dwarshuis 0e3c82946c ADD a bunch of references 2021-07-31 17:47:55 -04:00
Nathan Dwarshuis ec0338506c ADD footnote explaining that I didn't do the nmr stuff 2021-07-31 16:59:33 -04:00
Nathan Dwarshuis f0cb320c49 ENH paraphrase/update the modeling methods 2021-07-31 16:57:56 -04:00
Nathan Dwarshuis 0bf5b03827 ADD mouse summary figure
ENH paraphrase the nmr method section
2021-07-31 16:22:15 -04:00
Nathan Dwarshuis 19d4df58ca ADD regression tables to integrin figures 2021-07-31 12:57:17 -04:00
Nathan Dwarshuis 38c24e90cc ADD table for inside fraction regression 2021-07-30 18:10:07 -04:00
Nathan Dwarshuis 40e11e13fe ADD flow mabs 2021-07-30 18:06:05 -04:00
Nathan Dwarshuis 40875b4efa ADD diffusion figure to the kinetics stuff 2021-07-30 17:55:45 -04:00
Nathan Dwarshuis bca90222f3 ADD experimental overview and fold change/viability plots to il15 data 2021-07-30 17:44:17 -04:00
Nathan Dwarshuis 994df04db2 ADD experimental overview to integrin figs 2021-07-30 17:04:13 -04:00
Nathan Dwarshuis 2547ca8a6b FIX order and annotations in spade figure 2021-07-30 16:39:21 -04:00
Nathan Dwarshuis 20835d9579 ENH make dms mod fig not say 'carrier' 2021-07-30 16:24:12 -04:00
Nathan Dwarshuis 034d7df9dd ENH add cd4 to grex data fig 2021-07-30 15:23:00 -04:00
Nathan Dwarshuis fa68c38c5a ENH update caption 2021-07-30 15:12:24 -04:00
Nathan Dwarshuis de87aa4971 ENH update grex memory data 2021-07-30 15:10:48 -04:00
Nathan Dwarshuis 94f5ed8a85 ADD isotype control figure 2021-07-30 14:10:39 -04:00
Nathan Dwarshuis cae45d4f14 ENH use water vs pbs snb decay curve 2021-07-30 13:58:11 -04:00
Nathan Dwarshuis 1719e545c2 ENH add biotin wash fig
ADD first doe fig
2021-07-30 13:56:09 -04:00
Nathan Dwarshuis 35850690e8 ADD spade gating figure 2021-07-30 13:35:31 -04:00
Nathan Dwarshuis d2ebb84d91 ENH add gating strategy fig 2021-07-30 13:25:24 -04:00
Nathan Dwarshuis 613bccfa50 ADD metaanalsysi overvewi fig 2021-07-30 12:59:52 -04:00
Nathan Dwarshuis bd1a2c9f33 ADD overview figure 2021-07-30 12:27:37 -04:00
Nathan Dwarshuis c5d80389e6 ADD (some) future directions 2021-07-29 19:05:37 -04:00
Nathan Dwarshuis 86868ec140 ADD conclusion paragraphs 2021-07-29 18:44:50 -04:00
Nathan Dwarshuis 24cee598a5 ADD results for does 2021-07-29 17:56:27 -04:00
Nathan Dwarshuis ea06194344 ADD contour plots for aim2a 2021-07-29 16:41:04 -04:00
Nathan Dwarshuis d46d8c5620 ENH add cd4 and ratio to existing doe response plots 2021-07-29 16:32:54 -04:00
Nathan Dwarshuis 7562efed9e ADD regression results for CD4 mem and mem ratio 2021-07-29 16:20:40 -04:00
Nathan Dwarshuis fa192d90ee ADD results section for il2 curves 2021-07-29 15:07:29 -04:00
Nathan Dwarshuis a3b49d42ed ADD sr figure and nmr cor figure 2021-07-29 14:07:43 -04:00
Nathan Dwarshuis 572f10a9e4 ADD luminex doe figure 2021-07-29 13:46:05 -04:00
Nathan Dwarshuis 1c65546e41 ENH move IL2 stuff to its own section 2021-07-29 13:14:40 -04:00
Nathan Dwarshuis 54fb855b19 ADD discussion from paper 2021-07-29 13:11:55 -04:00
Nathan Dwarshuis 89866515e8 ADD results from the modeling paper 2021-07-29 13:01:36 -04:00
Nathan Dwarshuis 0c98ecce44 FIX silly char issues 2021-07-29 12:50:59 -04:00
Nathan Dwarshuis 6d9084fe92 ADD methods to aim 2a 2021-07-29 12:48:13 -04:00
Nathan Dwarshuis f6a24398ca ADD regression tables for DOE 2021-07-29 12:20:27 -04:00
Nathan Dwarshuis c5820b034d ADD discussion to aim 2b 2021-07-28 22:51:31 -04:00
Nathan Dwarshuis 48989b763b ADD results for il15 and integrin blocking sections 2021-07-28 22:13:37 -04:00
Nathan Dwarshuis 830702d95f ADD result for spade stuff 2021-07-28 17:59:19 -04:00
Nathan Dwarshuis b3558707d0 ADD methods to aim 2b 2021-07-28 17:03:54 -04:00
Nathan Dwarshuis 3238963b77 ADD discussion to mouse 2 2021-07-28 16:12:15 -04:00
Nathan Dwarshuis 35ba50b7e6 ADD results for mouse 2 experiment 2021-07-28 15:32:35 -04:00
Nathan Dwarshuis 21eab442ee ADD method for meta-analysis 2021-07-28 13:57:15 -04:00
Nathan Dwarshuis 4994343432 ENH add diffusion method section 2021-07-28 13:43:03 -04:00
Nathan Dwarshuis 395efa6657 ENH fix the snb decay curve method and results to not overreach 2021-07-28 12:32:22 -04:00
Nathan Dwarshuis 0e52b87b04 FIX make glossaries appear 2021-07-27 18:39:56 -04:00
Nathan Dwarshuis 8d82f1424d ADD results for mouse 1 QC 2021-07-27 18:27:13 -04:00
Nathan Dwarshuis 3ac375de6c ADD little bit about which Grex products I used 2021-07-27 18:18:36 -04:00
Nathan Dwarshuis 0f55d3b9cb ADD paragraph for luminex results 2021-07-27 18:15:09 -04:00
Nathan Dwarshuis eda1f3e6d6 ADD results paragraph for grex 2021-07-27 18:06:38 -04:00
Nathan Dwarshuis 67a4758da0 ADD small para on bcma 2021-07-27 17:53:07 -04:00
Nathan Dwarshuis ca3a1b9651 FIX typos 2021-07-27 17:45:53 -04:00
Nathan Dwarshuis 07644e1724 ADD reaction kinetics results paragraphs 2021-07-27 17:42:11 -04:00
Nathan Dwarshuis 8126156630 ADD results for biotin QC 2021-07-27 17:18:06 -04:00
Nathan Dwarshuis f91a944aa5 ADD interior quantification section 2021-07-27 16:37:58 -04:00
Nathan Dwarshuis b541c280eb ADD method for luminex 2021-07-27 16:13:09 -04:00
Nathan Dwarshuis dbf2869ae9 ADD bcma figure 2021-07-27 14:04:02 -04:00
Nathan Dwarshuis 043087ddc5 ADD luminex panel table 2021-07-27 13:53:28 -04:00
Nathan Dwarshuis c30b7d3c2d ADD grex figure 2021-07-27 13:48:26 -04:00
Nathan Dwarshuis e93859056d ADD full survival curve to first mouse experiment 2021-07-27 13:20:35 -04:00
Nathan Dwarshuis c610ddb40e ADD discussion to aim 3 mouse 1 2021-07-27 13:05:01 -04:00
Nathan Dwarshuis 3227c00a8a ADD results for mouse model 1 2021-07-27 12:59:13 -04:00
Nathan Dwarshuis cd9f438d7d REF add some notes to myself 2021-07-27 12:26:45 -04:00
Nathan Dwarshuis afbb5fadbd ADD methods for apoptotic marker quantification 2021-07-27 12:19:06 -04:00
Nathan Dwarshuis b0e0f420eb ADD figure for il2 concentration 2021-07-27 11:24:55 -04:00
Nathan Dwarshuis ed63f13797 ADD apoptosis figure 2021-07-27 11:07:28 -04:00
Nathan Dwarshuis 758b04c967 ADD figures to aim 2b 2021-07-26 18:16:21 -04:00
Nathan Dwarshuis 197aee093f ADD tables to aim 2a 2021-07-26 16:42:17 -04:00
Nathan Dwarshuis 4682a2693e ADD figs to aim 2a 2021-07-26 15:47:11 -04:00
Nathan Dwarshuis e329f072db ENH integrate tables and figs into aim 3 2021-07-26 13:50:51 -04:00
Nathan Dwarshuis ddb623424e ADD figs/tables for aim 3 2021-07-26 13:24:31 -04:00
Nathan Dwarshuis 5b6c4bed54 ENH split aim 2 into a and b 2021-07-25 23:11:30 -04:00
Nathan Dwarshuis 436eccc733 ADD methods for aim 3 2021-07-25 23:09:00 -04:00
Nathan Dwarshuis 537d942b5e FIX latex errors 2021-07-25 22:59:33 -04:00
Nathan Dwarshuis 3b28dc5612 ADD a bunch of discussion stuff 2021-07-25 22:53:14 -04:00
Nathan Dwarshuis 9f990e5da0 ADD a bunch of text for aim 1 2021-07-25 22:25:23 -04:00
Nathan Dwarshuis 18b9f9c1af ADD metaanslysis effects figure 2021-07-23 18:36:32 -04:00
Nathan Dwarshuis 59b3b0e7b8 ADD nonstick figure 2021-07-23 18:22:21 -04:00
Nathan Dwarshuis 02850b559e ADD car production figure 2021-07-23 18:16:45 -04:00
Nathan Dwarshuis f198eaba57 ADD inside carrier figure and phenotype figure 2021-07-23 18:02:17 -04:00
Nathan Dwarshuis 8ea9b8f4ca ENH integrate expansion figure 2021-07-23 17:34:04 -04:00
Nathan Dwarshuis 7cd0ca05ba ADD a bunch of figures 2021-07-23 17:14:45 -04:00
Nathan Dwarshuis 14d598b1b7 ADD tables 2021-07-23 13:03:28 -04:00
Nathan Dwarshuis 05eb0e6fb1 ADD aim 1 results outline 2021-07-23 12:18:00 -04:00
Nathan Dwarshuis 1a03a47131 ENH update aim 1 methods section 2021-07-23 11:53:15 -04:00
Nathan Dwarshuis c785cd4bad ADD methods for aim 1 2021-07-22 18:34:50 -04:00
Nathan Dwarshuis bda13878e5 ADD a bunch of background stuff 2021-07-22 16:23:07 -04:00